Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1451 Erigeron canadensis HOM05D001588 ORTHO05D006118 2.6e-52 208.4 102 100.0
HanXRQChr06g0165801 Helianthus annuus HOM05D001588 ORTHO05D006118 9.8e-31 136.7 78 79.5
TAR629G2281 Trochodendron aralioides HOM05D001588 ORTHO05D006118 7.0e-29 130.6 78 75.6
Duzib084G0785 Durio zibethinus HOM05D001588 ORTHO05D006118 1.2e-28 129.8 78 74.4
Lsat_1_v5_gn_3_7600 Lactuca sativa HOM05D001588 ORTHO05D006118 2.7e-28 128.6 78 78.2
ECA247G1386 Erigeron canadensis HOM05D003827 ORTHO05D004518 4.5e-28 127.9 80 80.0
COL.COLO4_34441 Corchorus olitorius HOM05D001588 ORTHO05D006118 5.9e-28 127.5 78 74.4
SalBow3G3462 Salvia bowleyana HOM05D001588 ORTHO05D006118 5.9e-28 127.5 78 73.1
Actinidia27390 Actinidia chinensis HOM05D001588 ORTHO05D006118 7.7e-28 127.1 78 74.4
CiPaw.11G137200 Carya illinoinensis HOM05D001588 ORTHO05D006118 7.7e-28 127.1 78 75.6
ECA246G0963 Erigeron canadensis HOM05D001588 ORTHO05D006118 7.7e-28 127.1 78 78.2
Atru.chr9.2223 Acer truncatum HOM05D001588 ORTHO05D006118 1.0e-27 126.7 78 70.5
Gohir.A12G227500 Gossypium hirsutum HOM05D001588 ORTHO05D006118 1.7e-27 125.9 78 73.1
Gohir.D12G229800 Gossypium hirsutum HOM05D001588 ORTHO05D006118 1.7e-27 125.9 78 73.1
Gorai.008G246100 Gossypium raimondii HOM05D001588 ORTHO05D006118 1.7e-27 125.9 78 73.1
Ciclev10021870m.g Citrus clementina HOM05D001588 ORTHO05D006118 2.9e-27 125.2 78 74.4
Dinv37655 Davidia involucrata HOM05D001588 ORTHO05D006118 2.9e-27 125.2 78 73.1
vmacro13949 Vaccinium macrocarpon HOM05D001588 ORTHO05D006118 2.9e-27 125.2 78 71.8
Migut.N02016 Erythranthe guttata HOM05D001588 ORTHO05D006118 3.8e-27 124.8 78 70.5
GSVIVG01019772001 Vitis vinifera HOM05D001588 ORTHO05D006118 3.8e-27 124.8 78 73.1
Cc08_g14500 Coffea canephora HOM05D001588 ORTHO05D006118 5.0e-27 124.4 78 67.9
Rhsim07G0091600 Rhododendron simsii HOM05D001588 ORTHO05D006118 6.5e-27 124.0 78 73.1
RcHm_v2.0_Chr7g0198231 Rosa chinensis HOM05D001588 ORTHO05D006118 6.5e-27 124.0 78 73.1
SGA_v2.0_scaffold253G45125 Striga asiatica HOM05D001588 ORTHO05D006118 6.5e-27 124.0 78 70.5
Migut.N01981 Erythranthe guttata HOM05D001588 ORTHO05D006118 8.6e-27 123.6 78 69.2
FAN04G2309 Fragaria x ananassa HOM05D001588 ORTHO05D006118 1.1e-26 123.2 78 71.8
FAN08G1628 Fragaria x ananassa HOM05D001588 ORTHO05D006118 1.1e-26 123.2 78 71.8
FAN13G0628 Fragaria x ananassa HOM05D001588 ORTHO05D006118 1.1e-26 123.2 78 71.8
PSO170G0774 Papaver somniferum HOM05D001588 ORTHO05D006118 1.1e-26 123.2 78 71.8
CSS0006311 Camellia sinensis var. sinensis HOM05D001588 ORTHO05D006118 1.5e-26 122.9 78 73.1
MSTRG.25594 Avicennia marina HOM05D001588 ORTHO05D006118 1.9e-26 122.5 78 73.1
MELO3C005662.2 Cucumis melo HOM05D001588 ORTHO05D006118 1.9e-26 122.5 78 71.8
Nn1g01478 Nelumbo nucifera HOM05D001588 ORTHO05D006118 1.9e-26 122.5 78 71.8
Cpa.g.sc74.12 Carica papaya HOM05D001588 ORTHO05D006118 2.5e-26 122.1 81 67.9
CsaV3_5G002940 Cucumis sativus L. HOM05D001588 ORTHO05D006118 2.5e-26 122.1 78 70.5
DCAR_000604 Daucus carota HOM05D001588 ORTHO05D006118 2.5e-26 122.1 78 73.1
AUR62017239 Chenopodium quinoa HOM05D001588 ORTHO05D006118 3.3e-26 121.7 78 66.7
CSS0014008 Camellia sinensis var. sinensis HOM05D001588 ORTHO05D006118 5.5e-26 120.9 78 71.8
Aqoxy5G04005 Aquilegia oxysepala HOM05D001588 ORTHO05D006118 7.2e-26 120.6 78 66.7
ClCG01G002850 Citrullus lanatus HOM05D001588 ORTHO05D006118 7.2e-26 120.6 78 70.5
Eucgr.D01864 Eucalyptus grandis HOM05D001588 ORTHO05D006118 7.2e-26 120.6 78 69.2
Oeu009178.1 Olea europaea HOM05D001588 ORTHO05D006118 7.2e-26 120.6 76 71.1
Solyc08g008000.2 Solanum lycopersicum HOM05D001588 ORTHO05D006118 7.2e-26 120.6 78 69.2
Sopen08g003870 Solanum pennellii HOM05D001588 ORTHO05D006118 7.2e-26 120.6 78 69.2
Sopen08g003880 Solanum pennellii HOM05D001588 ORTHO05D006118 7.2e-26 120.6 78 69.2
AUR62010596 Chenopodium quinoa HOM05D001588 ORTHO05D006118 9.5e-26 120.2 78 66.7
FvH4_5g02070 Fragaria vesca HOM05D001588 ORTHO05D006118 9.5e-26 120.2 78 70.5
FAN18G1170 Fragaria x ananassa HOM05D001588 ORTHO05D006118 9.5e-26 120.2 78 70.5
Aa31LG9G10710 Aethionema arabicum HOM05D001588 ORTHO05D006118 1.2e-25 119.8 78 66.7
Cfa012158 Carpinus fangiana HOM05D001588 ORTHO05D006118 1.2e-25 119.8 78 73.1
Medtr8g098460 Medicago truncatula HOM05D001588 ORTHO05D006118 1.2e-25 119.8 78 67.9
Sed0017409 Sechium edule HOM05D001588 ORTHO05D006118 1.2e-25 119.8 78 67.9
PGSC0003DMG400005820 Solanum tuberosum HOM05D001588 ORTHO05D006118 1.2e-25 119.8 78 69.2
PGSC0003DMG401014619 Solanum tuberosum HOM05D001588 ORTHO05D006118 1.2e-25 119.8 78 67.9
Hma1.2p1_1788F.1_g302410 Hydrangea macrophylla HOM05D001588 ORTHO05D006118 1.6e-25 119.4 78 69.2
Lj4g0014630 Lotus japonicus HOM05D001588 ORTHO05D006118 1.6e-25 119.4 78 69.2
Potri.001G106000 Populus trichocarpa HOM05D001588 ORTHO05D006118 1.6e-25 119.4 78 67.9
Prupe.5G097600 Prunus persica HOM05D001588 ORTHO05D006118 1.6e-25 119.4 76 71.1
Sopen08g003890 Solanum pennellii HOM05D001588 ORTHO05D006118 1.6e-25 119.4 78 70.5
Lj1g0021351 Lotus japonicus HOM05D001588 ORTHO05D006118 2.8e-25 118.6 78 66.7
Sabra01G0080300 Salix brachista HOM05D001588 ORTHO05D006118 2.8e-25 118.6 78 66.7
EL10Ac5g12783 Beta vulgaris HOM05D001588 ORTHO05D006118 3.6e-25 118.2 78 65.4
BcaC03g16342 Brassica carinata HOM05D001588 ORTHO05D006118 3.6e-25 118.2 78 65.4
C02p41670 Brassica napus HOM05D001588 ORTHO05D006118 3.6e-25 118.2 78 65.4
BolC2t10183H Brassica oleracea HOM05D001588 ORTHO05D006118 3.6e-25 118.2 78 65.4
CARHR254790 Cardamine hirsuta HOM05D001588 ORTHO05D006118 3.6e-25 118.2 78 66.7
Haze_08869 Corylus avellana HOM05D001588 ORTHO05D006118 3.6e-25 118.2 78 71.8
TWI81G0248 Tripterygium wilfordii HOM05D001588 ORTHO05D006118 3.6e-25 118.2 78 65.4
VMungo0251G1987 Vigna mungo HOM05D001588 ORTHO05D006118 3.6e-25 118.2 78 67.9
Sc07g0009680 Simmondsia chinensis HOM05D001588 ORTHO05D006118 4.7e-25 117.9 78 66.7
Solyc08g008010.4 Solanum lycopersicum HOM05D001588 ORTHO05D006118 4.7e-25 117.9 78 69.2
Thhalv10028795m.g Eutrema salsugineum HOM05D001588 ORTHO05D006118 6.1e-25 117.5 78 66.7
MD06G1079200 Malus domestica HOM05D001588 ORTHO05D006118 8.0e-25 117.1 76 69.7
Lj1g0001953 Lotus japonicus HOM05D001588 ORTHO05D006118 1.0e-24 116.7 78 64.1
Sp6g05900 Schrenkiella parvula HOM05D001588 ORTHO05D006118 1.4e-24 116.3 78 66.7
TPR.G12758 Trifolium pratense HOM05D001588 ORTHO05D006118 1.4e-24 116.3 78 66.7
MBI18_g19084_MAGBIO Magnolia biondii HOM05D001588 ORTHO05D006118 1.8e-24 115.9 73 72.6
Phvul.002G288200 Phaseolus vulgaris HOM05D001588 ORTHO05D006118 1.8e-24 115.9 78 66.7
Carub.0006s3072 Capsella rubella HOM05D001588 ORTHO05D006118 2.3e-24 115.5 78 67.9
CAN.G792.82 Capsicum annuum HOM05D001588 ORTHO05D006118 2.3e-24 115.5 76 68.4
Nitab4.5_0003907g0030 Nicotiana tabacum HOM05D001588 ORTHO05D006118 2.3e-24 115.5 78 66.7
Psat7g008360 Pisum sativum HOM05D001588 ORTHO05D006118 2.3e-24 115.5 78 65.4
Glyma.05G206600 Glycine max HOM05D001588 ORTHO05D006118 3.0e-24 115.2 78 65.4
Lalb_Chr16g0389911 Lupinus albus HOM05D001588 ORTHO05D006118 4.0e-24 114.8 78 65.4
Prupe.5G097800 Prunus persica HOM05D001588 ORTHO05D006118 4.0e-24 114.8 76 69.7
AL6G46210 Arabidopsis lyrata HOM05D001588 ORTHO05D006118 5.2e-24 114.4 78 66.7
Hund14771 Selenicereus undatus HOM05D001588 ORTHO05D006118 5.2e-24 114.4 78 61.5
Manes.02G023000 Manihot esculenta HOM05D001588 ORTHO05D006118 6.8e-24 114.0 78 66.7
A02p26200 Brassica napus HOM05D001588 ORTHO05D006118 8.9e-24 113.6 78 64.1
BraA02t07619Z Brassica rapa HOM05D001588 ORTHO05D006118 8.9e-24 113.6 78 64.1
Manes.02G023300 Manihot esculenta HOM05D001588 ORTHO05D006118 8.9e-24 113.6 78 65.4
Medtr7g103510 Medicago truncatula HOM05D001588 ORTHO05D006118 8.9e-24 113.6 76 65.8
CANSAT21G1525 Cannabis sativa HOM05D001588 ORTHO05D006118 1.2e-23 113.2 78 67.9
HanXRQChr15g0469771 Helianthus annuus HOM05D001588 ORTHO05D006118 1.2e-23 113.2 78 67.9
Psat6g176200 Pisum sativum HOM05D001588 ORTHO05D006118 1.2e-23 113.2 78 65.4
HanXRQChr15g0469471 Helianthus annuus HOM05D001588 ORTHO05D006118 1.5e-23 112.8 78 69.2
Os04g0555900 Oryza sativa ssp. japonica HOM05D001588 ORTHO05D006118 1.5e-23 112.8 78 62.8
Peaxi162Scf00102g01542 Petunia axillaris HOM05D001588 ORTHO05D006118 1.5e-23 112.8 78 65.4
QL12p018372 Quercus lobata HOM05D001588 ORTHO05D006118 1.5e-23 112.8 78 67.9
ATR0680G293 Amborella trichopoda HOM05D001588 ORTHO05D006118 2.0e-23 112.5 79 64.6
CANSAT21G1717 Cannabis sativa HOM05D001588 ORTHO05D006118 2.0e-23 112.5 78 66.7
HPP92_008513 Vanilla planifolia HOM05D001588 ORTHO05D006118 2.0e-23 112.5 79 63.3
PGR031G0224 Punica granatum HOM05D001588 ORTHO05D006118 4.4e-23 111.3 78 62.8
PGR031G0451 Punica granatum HOM05D001588 ORTHO05D006118 4.4e-23 111.3 78 62.8
AT4G11640 Arabidopsis thaliana HOM05D001588 ORTHO05D006118 7.5e-23 110.5 78 64.1
Thecc.03G276800 Theobroma cacao HOM05D001588 ORTHO05D006118 7.5e-23 110.5 68 76.5
Ah.12g057170 Amaranthus hybridus HOM05D001588 ORTHO05D006118 9.8e-23 110.2 77 61.0
arahy.Tifrunner.gnm1.ann1.C1C7DX Arachis hypogaea HOM05D001588 ORTHO05D006118 9.8e-23 110.2 78 61.5
HanXRQChr15g0469751 Helianthus annuus HOM05D001588 ORTHO05D006118 1.3e-22 109.8 77 66.2
Glyma.08G013500 Glycine max HOM05D001588 ORTHO05D006118 2.8e-22 108.6 78 62.8
HanXRQChr15g0469451 Helianthus annuus HOM05D001588 ORTHO05D006118 2.8e-22 108.6 78 65.4
HanXRQChr15g0469621 Helianthus annuus HOM05D001588 ORTHO05D006118 1.1e-21 106.7 79 65.8
SEGI_39536 Sequoiadendron giganteum HOM05D001588 ORTHO05D006118 1.8e-21 105.9 78 62.8
THA.LOC104806384 Tarenaya hassleriana HOM05D001588 ORTHO05D006118 1.8e-21 105.9 68 72.1
Psat7g034240 Pisum sativum HOM05D001588 ORTHO05D006118 2.4e-21 105.5 74 63.5
SMO351G0491 Selaginella moellendorffii HOM05D001588 ORTHO05D006118 2.4e-21 105.5 78 61.5
HanXRQChr15g0469631 Helianthus annuus HOM05D001588 ORTHO05D006118 3.1e-21 105.1 79 64.6
BcaB05g23820 Brassica carinata HOM05D001588 ORTHO05D006118 2.7e-20 102.1 67 68.7
Ca_17543_v3 Cicer arietinum L. HOM05D001588 ORTHO05D006118 3.5e-20 101.7 71 66.2
HanXRQChr15g0469761 Helianthus annuus HOM05D001588 ORTHO05D006118 5.9e-20 100.9 70 68.6
HanXRQChr02g0046401 Helianthus annuus HOM05D001588 ORTHO05D006118 1.7e-19 99.4 68 70.6
Mapoly0138s0043 Marchantia polymorpha HOM05D001588 ORTHO05D006118 2.3e-19 99.0 78 56.4
CBR_g31514 Chara braunii HOM05D001588 ORTHO05D006118 1.1e-18 96.7 79 57.0
Nitab4.5_0004836g0070 Nicotiana tabacum HOM05D001588 ORTHO05D006118 1.5e-18 96.3 91 53.8
AagrBONN_evm.TU.Sc2ySwM_344.4994 Anthoceros agrestis HOM05D001588 ORTHO05D006118 1.9e-18 95.9 77 50.6
AagrBONN_evm.TU.Sc2ySwM_344.5005 Anthoceros agrestis HOM05D001588 ORTHO05D006118 1.9e-18 95.9 77 50.6
Lj1g0019141 Lotus japonicus HOM05D001588 ORTHO05D006118 3.3e-18 95.1 62 67.7
HanXRQChr15g0469461 Helianthus annuus HOM05D001588 ORTHO05D006118 5.6e-18 94.4 77 59.7
Actinidia33759 Actinidia chinensis HOM05D001588 ORTHO05D006118 3.6e-17 91.7 59 74.6
HanXRQChr15g0469611 Helianthus annuus HOM05D001588 ORTHO05D006118 9.8e-15 83.6 62 59.7
Lj2A189T33 Lonicera japonica HOM05D001588 ORTHO05D006118 8.3e-14 80.5 51 74.5
unitig_37.g12250 Utricularia gibba HOM05D004635 ORTHO05D005899 2.4e-13 79.0 53 71.7
PRCOL_00005312 Prasinoderma coloniale HOM05D001588 ORTHO05D006118 9.2e-13 77.0 72 48.6
MCO03G466 Micromonas commoda HOM05D001588 ORTHO05D006118 2.7e-12 75.5 84 45.2
Cre06.g278101 Chlamydomonas reinhardtii HOM05D001588 ORTHO05D006118 3.0e-11 72.0 72 45.8
CAN.G792.84 Capsicum annuum HOM05D004635 ORTHO05D005899 1.5e-07 59.7 43 62.8


User provided reference genes

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