Gene: AT4G11640

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G11640
  • Transcript Identifier AT4G11640.1
  • Gene Type Coding gene
  • Location Chr4 : 7021770-7023252 : positive

Gene Family Information

  • ID HOM05D001588
  • #Genes/#Species 405/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G11640.1
  • symbol SR
  • Alias ATSR,serine racemase
  • uniprot Q2PGG3

Descriptions

  • Description serine racemase
  • Computational description serine racemase (SR); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: L-O-methylthreonine resistant 1 (TAIR:AT3G10050.1); Has 19715 Blast hits to 19705 proteins in 2624 species: Archae - 539; Bacteria - 13612; Metazoa - 549; Fungi - 719; Plants - 186; Viruses - 2; Other Eukaryotes - 4108 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070179
IBA
Gene OntologyD-serine biosynthetic process1
GO:0008152
IEA
GOA Databasemetabolic process
GO:0006520
IEA
GOA Databasecellular amino acid metabolic process
GO:0070178
IEA
GOA DatabaseD-serine metabolic process
GO:0070178
IDA
Gene OntologyD-serine metabolic process2
GO:0006563
IEA
GOA DatabaseL-serine metabolic process
GO:0006563
IDA
IBA
Gene OntologyL-serine metabolic process1 2
GO:0042866
IBA
Gene Ontologypyruvate biosynthetic process1
GO:0009069
IDA
Gene Ontologyserine family amino acid metabolic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016829
IEA
GOA Databaselyase activity
GO:0003941
IEA
GOA DatabaseL-serine ammonia-lyase activity
GO:0003941
IDA
IBA
Gene OntologyL-serine ammonia-lyase activity1 2
GO:0008721
IEA
GOA DatabaseD-serine ammonia-lyase activity
GO:0008721
IDA
IBA
Gene OntologyD-serine ammonia-lyase activity1 2
GO:0030378
IEA
GOA Databaseserine racemase activity
GO:0030378
IDA
ISS, IBA
Gene Ontologyserine racemase activity1 2
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0000287
IBA
Gene Ontologymagnesium ion binding1
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IBA
Gene OntologyATP binding1
GO:0030170
IEA
GOA Databasepyridoxal phosphate binding
GO:0030170
IBA
Gene Ontologypyridoxal phosphate binding1
GO:0043621
IEA
GOA Databaseprotein self-association
GO:0018114
IBA
Gene Ontologythreonine racemase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme
IPR001926 Pyridoxal-phosphate dependent enzyme
Mapman id Description
4.3.1 Amino acid metabolism.amino acid racemization.PLP-dependent serine racemase