Gene: AT4G11640
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G11640
- Transcript Identifier AT4G11640.1
- Gene Type Coding gene
- Location Chr4 : 7021770-7023252 : positive
Gene Family Information
- ID HOM05D001588
- #Genes/#Species 405/100
- Phylogenetic origin
- ID ORTHO05D006118
- #Genes/#Species 147/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G11640.1
- symbol SR
- Alias ATSR,serine racemase
- uniprot Q2PGG3
Descriptions
- Description serine racemase
- Computational description serine racemase (SR); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: L-O-methylthreonine resistant 1 (TAIR:AT3G10050.1); Has 19715 Blast hits to 19705 proteins in 2624 species: Archae - 539; Bacteria - 13612; Metazoa - 549; Fungi - 719; Plants - 186; Viruses - 2; Other Eukaryotes - 4108 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0070179 | IBA | Gene Ontology | D-serine biosynthetic process | 1 |
GO:0008152 | IEA | GOA Database | metabolic process | |
GO:0006520 | IEA | GOA Database | cellular amino acid metabolic process | |
GO:0070178 | IEA | GOA Database | D-serine metabolic process | |
GO:0070178 | IDA | Gene Ontology | D-serine metabolic process | 2 |
GO:0006563 | IEA | GOA Database | L-serine metabolic process | |
GO:0006563 | IDA IBA | Gene Ontology | L-serine metabolic process | 1 2 |
GO:0042866 | IBA | Gene Ontology | pyruvate biosynthetic process | 1 |
GO:0009069 | IDA | Gene Ontology | serine family amino acid metabolic process | 2 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016829 | IEA | GOA Database | lyase activity | |
GO:0003941 | IEA | GOA Database | L-serine ammonia-lyase activity | |
GO:0003941 | IDA IBA | Gene Ontology | L-serine ammonia-lyase activity | 1 2 |
GO:0008721 | IEA | GOA Database | D-serine ammonia-lyase activity | |
GO:0008721 | IDA IBA | Gene Ontology | D-serine ammonia-lyase activity | 1 2 |
GO:0030378 | IEA | GOA Database | serine racemase activity | |
GO:0030378 | IDA ISS, IBA | Gene Ontology | serine racemase activity | 1 2 |
GO:0046872 | IEA | GOA Database | metal ion binding | |
GO:0003824 | IEA | GOA Database | catalytic activity | |
GO:0016853 | IEA | GOA Database | isomerase activity | |
GO:0000287 | IBA | Gene Ontology | magnesium ion binding | 1 |
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0005524 | IBA | Gene Ontology | ATP binding | 1 |
GO:0030170 | IEA | GOA Database | pyridoxal phosphate binding | |
GO:0030170 | IBA | Gene Ontology | pyridoxal phosphate binding | 1 |
GO:0043621 | IEA | GOA Database | protein self-association | |
GO:0018114 | IBA | Gene Ontology | threonine racemase activity | 1 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
4.3.1 | Amino acid metabolism.amino acid racemization.PLP-dependent serine racemase |