Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 1.5e-162 576.2 325 100.0
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 4.3e-149 531.6 325 81.2
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 7.9e-143 510.8 322 78.3
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 1.4e-142 510.0 325 77.2
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.1e-141 506.9 325 77.5
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 1.1e-141 506.9 327 77.1
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 1.1e-141 506.9 325 76.6
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 2.5e-141 505.8 325 76.3
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 2.5e-141 505.8 325 76.6
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.7e-140 503.1 325 77.2
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 3.7e-140 501.9 325 76.0
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 8.2e-140 500.7 325 75.7
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.1e-139 500.4 325 76.6
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 1.8e-139 499.6 325 76.0
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 4.1e-139 498.4 325 76.0
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 6.9e-139 497.7 325 75.1
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 9.1e-139 497.3 325 77.2
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 9.1e-139 497.3 325 76.0
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 9.1e-139 497.3 325 76.0
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 1.2e-138 496.9 324 76.2
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.5e-138 496.5 325 74.5
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.5e-138 496.5 325 75.7
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 2.6e-138 495.7 325 75.4
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 5.9e-138 494.6 325 73.8
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 7.7e-138 494.2 325 75.1
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 7.7e-138 494.2 325 74.8
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 1.7e-137 493.0 325 74.5
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 2.9e-137 492.3 326 75.5
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 2.9e-137 492.3 325 74.2
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 2.9e-137 492.3 325 75.4
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 3.8e-137 491.9 326 74.8
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 3.8e-137 491.9 326 74.8
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 6.5e-137 491.1 326 73.9
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 8.5e-137 490.7 340 73.5
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 8.5e-137 490.7 324 74.1
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 8.5e-137 490.7 328 73.2
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 1.1e-136 490.3 325 75.1
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 1.1e-136 490.3 325 75.4
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.9e-136 489.6 328 72.9
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 2.5e-136 489.2 325 74.8
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 3.2e-136 488.8 325 74.5
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 4.2e-136 488.4 325 73.8
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 7.2e-136 487.6 326 75.2
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 7.2e-136 487.6 325 74.5
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 7.2e-136 487.6 325 73.8
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 9.4e-136 487.3 328 72.6
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 1.6e-135 486.5 325 74.2
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 1.6e-135 486.5 326 75.5
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 2.1e-135 486.1 325 74.2
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 2.1e-135 486.1 325 74.2
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 2.7e-135 485.7 325 73.8
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 2.7e-135 485.7 325 73.8
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 2.7e-135 485.7 325 73.5
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.7e-135 485.7 326 73.6
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 3.6e-135 485.3 325 74.2
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 4.7e-135 485.0 325 74.8
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 4.7e-135 485.0 326 73.6
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 4.7e-135 485.0 325 74.5
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 6.1e-135 484.6 332 73.8
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 6.1e-135 484.6 325 73.8
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 1.4e-134 483.4 325 73.5
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 1.4e-134 483.4 326 73.3
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 1.4e-134 483.4 324 72.8
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 1.8e-134 483.0 326 73.6
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 2.3e-134 482.6 327 74.3
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 5.1e-134 481.5 325 75.1
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 8.8e-134 480.7 324 75.3
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 8.8e-134 480.7 352 70.2
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 1.1e-133 480.3 328 73.2
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 1.1e-133 480.3 280 83.6
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 4.4e-133 478.4 324 73.5
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 5.7e-133 478.0 364 67.0
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 9.7e-133 477.2 339 71.4
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 1.3e-132 476.9 326 73.6
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 2.8e-132 475.7 326 72.4
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 2.8e-132 475.7 326 73.0
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 3.7e-132 475.3 326 72.7
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 3.7e-132 475.3 325 72.3
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 6.3e-132 474.6 326 72.4
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 6.3e-132 474.6 326 72.4
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 6.3e-132 474.6 326 73.9
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 6.3e-132 474.6 326 72.4
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 6.3e-132 474.6 326 72.4
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 6.3e-132 474.6 326 72.4
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 8.2e-132 474.2 326 73.3
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 8.2e-132 474.2 326 73.3
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 1.4e-131 473.4 326 73.6
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 1.8e-131 473.0 326 73.6
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.8e-131 473.0 328 72.6
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 2.4e-131 472.6 326 73.6
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 3.1e-131 472.2 280 81.1
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 3.1e-131 472.2 328 72.6
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 4.1e-131 471.9 326 72.7
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 4.1e-131 471.9 326 72.7
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 5.3e-131 471.5 325 73.2
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 1.2e-130 470.3 280 81.4
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.2e-130 470.3 324 73.1
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 2.0e-130 469.5 325 71.4
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 3.5e-130 468.8 326 72.1
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 4.5e-130 468.4 326 71.8
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 5.9e-130 468.0 326 73.0
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 2.9e-129 465.7 280 80.7
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 2.9e-129 465.7 324 71.9
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 2.9e-129 465.7 325 70.5
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 1.5e-128 463.4 325 71.4
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 2.5e-128 462.6 324 71.9
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 5.5e-128 461.5 325 71.1
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 1.6e-127 459.9 296 76.0
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 2.7e-127 459.1 325 70.2
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 1.8e-126 456.4 280 79.6
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 2.3e-126 456.1 325 69.5
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 3.0e-126 455.7 325 71.4
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 4.0e-126 455.3 357 66.9
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 5.2e-126 454.9 325 71.1
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 8.8e-126 454.1 326 69.9
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 2.0e-125 453.0 326 69.9
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 2.0e-125 453.0 325 69.2
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 2.6e-125 452.6 326 69.6
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 2.8e-124 449.1 389 62.0
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 8.2e-124 447.6 320 70.3
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.1e-123 445.7 281 78.6
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 2.0e-122 443.0 323 65.9
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 2.7e-122 442.6 325 69.8
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 4.5e-122 441.8 328 68.9
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 5.9e-122 441.4 326 68.7
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 7.7e-122 441.0 323 65.9
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 7.7e-122 441.0 327 68.5
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 8.5e-121 437.6 324 68.5
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 4.2e-120 435.3 327 68.8
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 5.5e-120 434.9 326 66.9
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 1.6e-119 433.3 326 68.1
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 2.3e-118 429.5 280 76.8
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 2.3e-118 429.5 326 68.1
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 3.4e-117 425.6 280 73.9
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 3.7e-116 422.2 304 70.7
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 5.4e-115 418.3 332 63.9
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 9.1e-115 417.5 324 65.4
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 4.2e-112 408.7 288 71.2
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 6.1e-111 404.8 283 70.3
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 3.4e-109 399.1 325 59.7
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 7.5e-109 397.9 234 81.2
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 7.5e-109 397.9 287 69.0
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 2.2e-108 396.4 316 63.0
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 2.2e-108 396.4 325 60.0
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 1.8e-107 393.3 234 81.2
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 7.0e-107 391.3 325 58.8
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 1.2e-106 390.6 325 58.8
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.2e-106 390.6 325 58.8
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 3.5e-106 389.0 328 58.2
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 2.9e-105 386.0 352 60.8
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 1.9e-104 383.3 277 70.0
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 1.2e-103 380.6 236 80.1
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 1.6e-103 380.2 325 60.9
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 1.4e-102 377.1 235 77.9
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 1.8e-102 376.7 327 58.1
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 9.8e-101 370.9 326 56.7
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 1.7e-100 370.2 326 58.3
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 3.7e-100 369.0 213 83.1
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.4e-99 367.1 326 61.0
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 3.0e-97 359.4 235 73.6
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 4.9e-92 342.0 239 69.0
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 1.2e-90 337.4 266 66.2
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 1.7e-89 333.6 343 50.7
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 8.9e-86 321.2 197 76.1
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 3.7e-84 315.8 322 48.8
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 1.2e-82 310.8 358 46.9
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 3.9e-81 305.8 327 48.9
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 1.4e-70 270.8 273 54.2
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 3.5e-66 256.1 200 66.0
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.9e-64 250.4 153 79.1
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 3.3e-64 249.6 177 70.6
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 3.1e-46 189.9 126 76.2
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 3.0e-41 173.3 120 71.7
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 3.9e-41 172.9 148 64.2
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 4.3e-40 169.5 120 70.8
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 4.5e-37 159.5 260 33.5
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 8.5e-36 155.2 266 41.4
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 4.6e-34 149.4 115 62.6
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 6.9e-30 135.6 275 31.3
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 1.0e-28 131.7 90 75.6
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 2.1e-26 124.0 270 26.3
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 1.2e-18 98.2 224 27.7
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 2.3e-09 67.4 49 73.5
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 8.8e-09 65.5 39 76.9


User provided reference genes

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