Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G0502 Erigeron canadensis HOM05D007428 ORTHO05D009308 4.5e-55 217.6 105 100.0
Lsat_1_v5_gn_3_8800 Lactuca sativa HOM05D007428 ORTHO05D009308 4.5e-39 164.5 93 86.0
Dinv38899 Davidia involucrata HOM05D007428 ORTHO05D009308 5.7e-34 147.5 93 77.4
Actinidia10608 Actinidia chinensis HOM05D007428 ORTHO05D009308 7.4e-34 147.1 93 74.2
GSVIVG01019416001 Vitis vinifera HOM05D007428 ORTHO05D009308 4.1e-32 141.4 91 74.7
Manes.02G017900 Manihot esculenta HOM05D007428 ORTHO05D009308 2.0e-31 139.0 85 76.5
DCAR_005573 Daucus carota HOM05D007428 ORTHO05D009308 2.6e-31 138.7 84 78.6
ATR0661G028 Amborella trichopoda HOM05D007428 ORTHO05D009308 2.9e-30 135.2 98 69.4
Peaxi162Scf00102g01635 Petunia axillaris HOM05D007428 ORTHO05D009308 2.9e-30 135.2 90 71.1
MBI11_g02029_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 3.8e-30 134.8 91 72.5
CDE04G2716 Ceratophyllum demersum HOM05D007428 ORTHO05D009308 8.5e-30 133.7 93 71.0
AUR62000169 Chenopodium quinoa HOM05D007428 ORTHO05D009308 1.1e-29 133.3 95 70.5
PGSC0003DMG400005826 Solanum tuberosum HOM05D007428 ORTHO05D009308 1.5e-29 132.9 91 69.2
CSS0042206 Camellia sinensis var. sinensis HOM05D007428 ORTHO05D009308 2.5e-29 132.1 93 71.0
AUR62039842 Chenopodium quinoa HOM05D007428 ORTHO05D009308 2.5e-29 132.1 95 69.5
Phvul.001G130100 Phaseolus vulgaris HOM05D007428 ORTHO05D009308 3.2e-29 131.7 90 70.0
Potri.001G099200 Populus trichocarpa HOM05D007428 ORTHO05D009308 4.2e-29 131.3 85 72.9
Solyc08g008120.4 Solanum lycopersicum HOM05D007428 ORTHO05D009308 5.5e-29 131.0 91 68.1
Sopen08g003980 Solanum pennellii HOM05D007428 ORTHO05D009308 5.5e-29 131.0 91 68.1
THA.LOC104809367 Tarenaya hassleriana HOM05D007428 ORTHO05D009308 5.5e-29 131.0 89 69.7
EL10Ac4g10178 Beta vulgaris HOM05D007428 ORTHO05D009308 1.6e-28 129.4 90 66.7
Ciclev10023047m.g Citrus clementina HOM05D007428 ORTHO05D009308 1.6e-28 129.4 85 71.8
CiPaw.11G129900 Carya illinoinensis HOM05D007428 ORTHO05D009308 2.7e-28 128.6 86 72.1
Cfa012244 Carpinus fangiana HOM05D007428 ORTHO05D009308 4.7e-28 127.9 92 69.6
TAR374G0673 Trochodendron aralioides HOM05D007428 ORTHO05D009308 4.7e-28 127.9 90 67.8
PSO782G0783 Papaver somniferum HOM05D007428 ORTHO05D009308 8.0e-28 127.1 92 68.5
Aa31LG9G500 Aethionema arabicum HOM05D007428 ORTHO05D009308 1.0e-27 126.7 89 69.7
Prupe.5G106400 Prunus persica HOM05D007428 ORTHO05D009308 1.0e-27 126.7 85 71.8
Lalb_Chr25g0287261 Lupinus albus HOM05D007428 ORTHO05D009308 1.4e-27 126.3 91 68.1
Duzib084G1020 Durio zibethinus HOM05D007428 ORTHO05D009308 1.8e-27 125.9 84 71.4
Nn1g01671 Nelumbo nucifera HOM05D007428 ORTHO05D009308 1.8e-27 125.9 85 69.4
PGR031G0112 Punica granatum HOM05D007428 ORTHO05D009308 3.0e-27 125.2 85 69.4
Gohir.D03G078400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 5.2e-27 124.4 84 70.2
Gorai.003G085700 Gossypium raimondii HOM05D007428 ORTHO05D009308 5.2e-27 124.4 84 70.2
Eucgr.D01813 Eucalyptus grandis HOM05D007428 ORTHO05D009308 6.7e-27 124.0 91 64.8
Thhalv10028001m.g Eutrema salsugineum HOM05D007428 ORTHO05D009308 6.7e-27 124.0 84 70.2
Atru.chr9.2117 Acer truncatum HOM05D007428 ORTHO05D009308 8.8e-27 123.6 85 70.6
Sabra01G0074400 Salix brachista HOM05D007428 ORTHO05D009308 8.8e-27 123.6 85 70.6
Sp7g00480 Schrenkiella parvula HOM05D007428 ORTHO05D009308 1.1e-26 123.2 94 66.0
CARHR287610 Cardamine hirsuta HOM05D007428 ORTHO05D009308 2.0e-26 122.5 94 66.0
Duzib205G1701 Durio zibethinus HOM05D007428 ORTHO05D009308 2.0e-26 122.5 84 69.0
Glyma.19G137300 Glycine max HOM05D007428 ORTHO05D009308 2.0e-26 122.5 91 65.9
AT5G41560 Arabidopsis thaliana HOM05D007428 ORTHO05D009308 2.6e-26 122.1 94 64.9
BcaB06g27627 Brassica carinata HOM05D007428 ORTHO05D009308 2.6e-26 122.1 84 67.9
TAR375G0610 Trochodendron aralioides HOM05D007428 ORTHO05D009308 2.6e-26 122.1 85 64.7
Carub.0007s3391 Capsella rubella HOM05D007428 ORTHO05D009308 4.4e-26 121.3 89 66.3
Lj1g0002351 Lotus japonicus HOM05D007428 ORTHO05D009308 4.4e-26 121.3 90 63.3
AL7G47840 Arabidopsis lyrata HOM05D007428 ORTHO05D009308 5.7e-26 120.9 94 63.8
FAN04G2816 Fragaria x ananassa HOM05D007428 ORTHO05D009308 5.7e-26 120.9 91 64.8
FAN13G2357 Fragaria x ananassa HOM05D007428 ORTHO05D009308 5.7e-26 120.9 91 64.8
FAN18G4254 Fragaria x ananassa HOM05D007428 ORTHO05D009308 5.7e-26 120.9 91 64.8
ClCG01G002350 Citrullus lanatus HOM05D007428 ORTHO05D009308 7.5e-26 120.6 89 65.2
Medtr7g091260 Medicago truncatula HOM05D007428 ORTHO05D009308 7.5e-26 120.6 90 65.6
BcaC02g08952 Brassica carinata HOM05D007428 ORTHO05D009308 9.7e-26 120.2 88 64.8
C04p48540 Brassica napus HOM05D007428 ORTHO05D009308 9.7e-26 120.2 88 64.8
BolC4t26447H Brassica oleracea HOM05D007428 ORTHO05D009308 9.7e-26 120.2 88 64.8
MELO3C005713.2 Cucumis melo HOM05D007428 ORTHO05D009308 9.7e-26 120.2 89 65.2
CsaV3_5G002410 Cucumis sativus L. HOM05D007428 ORTHO05D009308 9.7e-26 120.2 89 65.2
Gohir.A08G114300 Gossypium hirsutum HOM05D007428 ORTHO05D009308 9.7e-26 120.2 91 65.9
RcHm_v2.0_Chr7g0196601 Rosa chinensis HOM05D007428 ORTHO05D009308 9.7e-26 120.2 91 64.8
TPR.G18241 Trifolium pratense HOM05D007428 ORTHO05D009308 9.7e-26 120.2 90 65.6
CANSAT21G2180 Cannabis sativa HOM05D007428 ORTHO05D009308 1.3e-25 119.8 99 64.6
Glyma.03G134700 Glycine max HOM05D007428 ORTHO05D009308 1.3e-25 119.8 95 65.3
Gohir.D08G134500 Gossypium hirsutum HOM05D001458 ORTHO05D008462 1.3e-25 119.8 91 65.9
SEGI_01808 Sequoiadendron giganteum HOM05D007428 ORTHO05D009308 1.3e-25 119.8 91 62.6
A04p14670 Brassica napus HOM05D007428 ORTHO05D009308 1.7e-25 119.4 84 66.7
BraA04t17107Z Brassica rapa HOM05D007428 ORTHO05D009308 1.7e-25 119.4 84 66.7
SGA_v2.0_scaffold111G31471 Striga asiatica HOM05D007428 ORTHO05D009308 2.2e-25 119.0 84 65.5
Rhsim02G0235600 Rhododendron simsii HOM05D007428 ORTHO05D009308 6.3e-25 117.5 142 47.2
Sed0012859 Sechium edule HOM05D007428 ORTHO05D009308 6.3e-25 117.5 89 65.2
PSO478G2995 Papaver somniferum HOM05D007428 ORTHO05D009308 8.2e-25 117.1 92 65.2
arahy.Tifrunner.gnm1.ann1.I9CJRL Arachis hypogaea HOM05D007428 ORTHO05D009308 1.1e-24 116.7 88 63.6
MD06G1090900 Malus domestica HOM05D007428 ORTHO05D009308 1.1e-24 116.7 87 66.7
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 1.1e-24 116.7 88 64.8
Cc08_g15240 Coffea canephora HOM05D007428 ORTHO05D009308 5.3e-24 114.4 89 61.8
Nn6g32110 Nelumbo nucifera HOM05D007428 ORTHO05D009308 1.2e-23 113.2 80 71.2
Aqoxy7G00179 Aquilegia oxysepala HOM05D007428 ORTHO05D009308 1.6e-23 112.8 90 57.8
CiPaw.12G089300 Carya illinoinensis HOM05D007428 ORTHO05D009308 1.0e-22 110.2 97 57.7
arahy.Tifrunner.gnm1.ann1.LGCW4P Arachis hypogaea HOM05D007428 ORTHO05D009308 1.7e-22 109.4 101 56.4
QL12p031804 Quercus lobata HOM05D007428 ORTHO05D009308 2.2e-22 109.0 128 47.7
Hma1.2p1_0216F.1_g091060 Hydrangea macrophylla HOM05D007428 ORTHO05D009308 2.9e-22 108.6 99 61.6
Duzib068G1017 Durio zibethinus HOM05D007428 ORTHO05D009308 1.5e-21 106.3 62 75.8
SMO117G0109 Selaginella moellendorffii HOM05D007428 ORTHO05D009308 2.5e-21 105.5 84 59.5
HPP92_001758 Vanilla planifolia HOM05D007428 ORTHO05D009308 2.5e-21 105.5 85 60.0
Zm00001eb001890 Zea mays HOM05D007428 ORTHO05D009308 9.4e-21 103.6 81 65.4
Gorai.004G137700 Gossypium raimondii HOM05D007428 ORTHO05D009308 1.6e-20 102.8 69 69.6
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 3.6e-20 101.7 69 66.7
Ah.06g194380 Amaranthus hybridus HOM05D007428 ORTHO05D009308 4.0e-19 98.2 171 40.4
Os03g0125700 Oryza sativa ssp. japonica HOM05D007428 ORTHO05D009308 4.0e-19 98.2 100 57.0
DCAR_008355 Daucus carota HOM05D001458 ORTHO05D008462 5.2e-19 97.8 66 74.2
Zm00001eb403670 Zea mays HOM05D007428 ORTHO05D009308 3.4e-18 95.1 87 62.1
Nitab4.5_0007906g0040 Nicotiana tabacum HOM05D007428 ORTHO05D009308 4.8e-17 91.3 91 50.5
HanXRQChr17g0533231 Helianthus annuus HOM05D007428 ORTHO05D009308 3.1e-16 88.6 52 88.5
COL.COLO4_08363 Corchorus olitorius HOM05D007428 ORTHO05D009308 5.4e-16 87.8 61 68.9
MD14G1111700 Malus domestica HOM05D007428 ORTHO05D009308 7.0e-16 87.4 64 67.2
HPP92_003464 Vanilla planifolia HOM05D007428 ORTHO05D009308 9.1e-16 87.0 72 58.3
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 7.7e-15 84.0 62 64.5
Sc01g0009840 Simmondsia chinensis HOM05D007428 ORTHO05D009308 1.7e-14 82.8 48 72.9
Cfa012240 Carpinus fangiana HOM05D007428 ORTHO05D009308 2.9e-14 82.0 63 66.7
FvH4_5g03180 Fragaria vesca HOM05D007428 ORTHO05D009308 7.2e-13 77.4 62 64.5
Thecc.03G286400 Theobroma cacao HOM05D007428 ORTHO05D009308 6.1e-12 74.3 41 78.0
Gohir.A02G105400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 1.0e-11 73.6 46 69.6
MBI17_g11952_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 1.8e-11 72.8 48 66.7
vmacro11409 Vaccinium macrocarpon HOM05D007428 ORTHO05D009308 4.9e-09 64.7 52 67.3
CAN.G792.73 Capsicum annuum HOM05D003118 ORTHO05D009308 2.7e-07 58.9 44 70.5


User provided reference genes

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