Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 9.5e-259 896.3 459 100.0
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 2.8e-226 788.5 459 86.9
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 3.8e-223 778.1 454 88.3
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 9.0e-217 756.9 461 82.4
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 1.6e-210 736.1 462 81.6
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 1.1e-209 733.4 461 80.3
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 5.8e-208 727.6 462 78.4
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 1.7e-207 726.1 459 80.0
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 2.9e-207 725.3 462 79.2
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 8.4e-207 723.8 462 79.2
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 4.6e-205 718.0 460 79.1
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 4.6e-205 718.0 462 79.0
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 7.9e-205 717.2 461 79.6
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.3e-204 716.5 460 78.9
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 2.3e-204 715.7 461 77.9
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 3.9e-204 714.9 461 78.5
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 1.6e-202 709.5 461 76.8
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 2.8e-202 708.8 461 77.4
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 3.7e-202 708.4 461 77.7
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 1.4e-201 706.4 461 77.9
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.8e-201 706.1 469 78.3
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 6.9e-201 704.1 461 77.0
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 6.9e-201 704.1 462 77.1
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 9.0e-201 703.7 459 78.2
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 1.5e-200 703.0 460 76.7
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 1.7e-199 699.5 481 75.3
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 2.9e-199 698.7 460 77.2
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 2.9e-199 698.7 459 76.5
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 8.4e-199 697.2 461 77.0
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 1.1e-198 696.8 467 76.9
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 1.4e-198 696.4 468 75.6
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 1.9e-198 696.0 462 76.8
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 3.2e-198 695.3 486 74.1
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 5.5e-198 694.5 468 75.2
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 9.3e-198 693.7 416 82.0
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 1.2e-197 693.3 461 77.2
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 2.1e-197 692.6 459 75.8
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 2.7e-197 692.2 460 75.7
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 3.5e-197 691.8 465 75.9
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 4.6e-197 691.4 464 75.9
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 4.6e-197 691.4 458 77.9
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 7.9e-197 690.6 461 76.8
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 1.0e-196 690.3 465 75.7
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 1.0e-196 690.3 461 76.1
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 1.3e-196 689.9 468 76.1
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 3.0e-196 688.7 462 76.4
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 3.9e-196 688.3 462 76.4
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 3.9e-196 688.3 462 76.2
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 3.9e-196 688.3 492 72.2
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 5.1e-196 688.0 459 76.3
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 6.7e-196 687.6 464 75.6
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 1.1e-195 686.8 462 76.0
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 1.9e-195 686.0 462 76.0
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 5.7e-195 684.5 462 75.1
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 9.6e-195 683.7 462 76.0
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 6.3e-194 681.0 461 75.3
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 6.3e-194 681.0 464 75.9
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 1.8e-193 679.5 459 75.6
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 3.1e-193 678.7 462 73.2
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 4.1e-193 678.3 468 73.1
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 2.6e-192 675.6 464 74.8
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 4.5e-192 674.9 462 76.0
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 5.9e-192 674.5 509 69.5
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 1.0e-191 673.7 466 75.3
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 1.3e-191 673.3 462 72.1
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 2.2e-191 672.5 464 74.8
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 2.9e-191 672.2 426 79.8
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 8.5e-191 670.6 468 74.1
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 1.1e-190 670.2 469 74.4
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 1.4e-190 669.8 434 78.1
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 1.4e-190 669.8 462 72.1
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 1.9e-190 669.5 462 72.9
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 1.9e-190 669.5 462 72.9
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 1.9e-190 669.5 462 72.9
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 2.5e-190 669.1 427 79.2
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 3.2e-190 668.7 470 73.0
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 4.2e-190 668.3 466 74.9
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 9.3e-190 667.2 462 71.6
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.6e-189 666.4 468 74.6
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 2.1e-189 666.0 462 71.6
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 2.7e-189 665.6 468 74.6
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 1.3e-188 663.3 468 74.4
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 2.3e-188 662.5 463 72.1
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 3.0e-188 662.1 463 72.1
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 5.1e-188 661.4 464 73.5
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.5e-187 659.1 449 75.3
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 4.3e-187 658.3 462 71.4
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 4.3e-187 658.3 462 71.9
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 9.7e-187 657.1 447 75.2
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 1.6e-186 656.4 462 70.8
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 8.2e-186 654.1 463 72.6
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 1.8e-185 652.9 468 72.6
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 2.4e-185 652.5 468 71.6
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 6.9e-185 651.0 421 77.2
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 2.0e-184 649.4 468 71.2
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 7.7e-184 647.5 401 78.8
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 3.8e-183 645.2 398 78.9
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 8.5e-183 644.0 418 76.6
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 1.0e-180 637.1 461 71.6
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 3.0e-180 635.6 466 69.5
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.1e-177 627.1 464 69.4
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 6.9e-177 624.4 488 66.8
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 6.5e-175 617.8 458 69.2
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 6.1e-173 611.3 463 68.0
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 2.3e-172 609.4 454 68.5
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 2.3e-172 609.4 463 68.3
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 2.3e-172 609.4 458 67.5
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 2.0e-171 606.3 415 75.4
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 5.5e-166 588.2 421 68.9
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 3.0e-164 582.4 397 74.1
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 2.1e-149 533.1 318 84.6
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 2.3e-140 503.1 400 61.8
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 2.9e-138 496.1 381 68.0
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 1.4e-137 493.8 416 61.1
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 2.3e-132 476.5 406 58.1
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 3.5e-120 436.0 464 53.9
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 3.4e-107 392.9 418 53.6
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 3.5e-104 382.9 285 65.6
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 4.0e-100 369.4 535 39.1
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 7.1e-97 358.6 258 72.1
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 2.7e-80 303.5 188 80.3
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 5.0e-74 282.7 268 57.1
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 1.2e-64 251.5 253 55.3
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 2.7e-64 250.4 253 54.9
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 4.7e-56 223.0 207 59.4
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 6.7e-47 192.6 156 64.7
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 1.1e-44 185.3 162 64.8
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 2.2e-42 177.6 146 64.4
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 6.5e-42 176.0 119 79.8
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 1.2e-35 155.2 123 65.9
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 1.5e-33 148.3 394 31.0
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 5.2e-23 113.2 60 90.0
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 3.9e-18 97.1 57 86.0
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 4.7e-16 90.1 59 67.8
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 6.2e-16 89.7 73 69.9
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 1.1e-09 68.9 65 63.1


User provided reference genes

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