Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G1977 Erigeron canadensis HOM05D005474 ORTHO05D006551 2.1e-241 838.6 405 100.0
HanXRQChr03g0083521 Helianthus annuus HOM05D005474 ORTHO05D006551 2.8e-169 599.0 380 77.9
Lsat_1_v5_gn_6_83981 Lactuca sativa HOM05D005474 ORTHO05D006551 7.0e-165 584.3 411 70.8
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 4.3e-154 548.5 422 66.1
Lj2C167G11 Lonicera japonica HOM05D005474 ORTHO05D006551 2.8e-153 545.8 424 65.6
TAR374G0037 Trochodendron aralioides HOM05D005474 ORTHO05D006551 1.5e-151 540.0 419 64.7
CSS0001924 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 2.0e-151 539.7 429 64.3
Rhsim02G0243400 Rhododendron simsii HOM05D005474 ORTHO05D006551 2.0e-151 539.7 421 64.4
TAR629G2557 Trochodendron aralioides HOM05D005474 ORTHO05D006551 9.9e-151 537.3 423 63.4
Actinidia22160 Actinidia chinensis HOM05D005474 ORTHO05D006551 2.4e-149 532.7 426 62.9
GSVIVG01019532001 Vitis vinifera HOM05D005474 ORTHO05D006551 1.6e-148 530.0 415 64.1
Cc08_g16070 Coffea canephora HOM05D005474 ORTHO05D006551 2.3e-147 526.2 421 63.2
Prupe.5G120100 Prunus persica HOM05D005474 ORTHO05D006551 1.9e-146 523.1 423 63.4
Haze_09055 Corylus avellana HOM05D005474 ORTHO05D006551 3.3e-146 522.3 423 63.6
MD14G1128900 Malus domestica HOM05D005474 ORTHO05D006551 6.2e-145 518.1 422 63.3
CANSAT21G1635 Cannabis sativa HOM05D005474 ORTHO05D006551 6.8e-144 514.6 420 61.7
PGR042G2806 Punica granatum HOM05D005474 ORTHO05D006551 8.9e-144 514.2 418 60.0
vmacro11424 Vaccinium macrocarpon HOM05D005474 ORTHO05D006551 8.9e-144 514.2 449 59.5
Aqoxy7G00102 Aquilegia oxysepala HOM05D005474 ORTHO05D006551 1.5e-143 513.5 420 62.4
COL.COLO4_10702 Corchorus olitorius HOM05D005474 ORTHO05D006551 1.5e-143 513.5 420 60.0
RcHm_v2.0_Chr7g0194791 Rosa chinensis HOM05D005474 ORTHO05D006551 4.4e-143 511.9 415 61.9
Atru.chr9.1979 Acer truncatum HOM05D005474 ORTHO05D006551 5.8e-143 511.5 421 63.9
Cfa012014 Carpinus fangiana HOM05D005474 ORTHO05D006551 5.8e-143 511.5 425 62.1
Atru.chr9.1994 Acer truncatum HOM05D005474 ORTHO05D006551 1.3e-142 510.4 421 63.9
FAN18G1504 Fragaria x ananassa HOM05D005474 ORTHO05D006551 1.3e-142 510.4 425 61.4
Thecc.03G298100 Theobroma cacao HOM05D005474 ORTHO05D006551 1.7e-142 510.0 415 61.7
FAN04G1263 Fragaria x ananassa HOM05D005474 ORTHO05D006551 2.2e-142 509.6 426 61.5
FvH4_5g04600 Fragaria vesca HOM05D005474 ORTHO05D006551 3.8e-142 508.8 426 61.3
FAN18G3330 Fragaria x ananassa HOM05D005474 ORTHO05D006551 6.4e-142 508.1 425 61.2
QL02p030435 Quercus lobata HOM05D005474 ORTHO05D006551 6.4e-142 508.1 414 61.8
MD06G1107100 Malus domestica HOM05D005474 ORTHO05D006551 1.1e-141 507.3 424 62.7
FAN08G2748 Fragaria x ananassa HOM05D005474 ORTHO05D006551 1.4e-141 506.9 426 61.0
Gohir.D12G237600 Gossypium hirsutum HOM05D005474 ORTHO05D006551 3.2e-141 505.8 420 60.2
Duzib084G1138 Durio zibethinus HOM05D005474 ORTHO05D006551 9.2e-141 504.2 420 59.8
Eucgr.D01738 Eucalyptus grandis HOM05D005474 ORTHO05D006551 9.2e-141 504.2 418 60.5
Gohir.A12G236400 Gossypium hirsutum HOM05D005474 ORTHO05D006551 9.2e-141 504.2 420 60.5
Sed0014344 Sechium edule HOM05D005474 ORTHO05D006551 9.2e-141 504.2 417 60.7
FAN13G0565 Fragaria x ananassa HOM05D005474 ORTHO05D006551 1.2e-140 503.8 426 61.0
Gorai.008G254400 Gossypium raimondii HOM05D005474 ORTHO05D006551 6.0e-140 501.5 420 59.8
PSO170G1345 Papaver somniferum HOM05D005474 ORTHO05D006551 1.3e-139 500.4 428 58.6
Ciclev10020308m.g Citrus clementina HOM05D005474 ORTHO05D006551 5.1e-139 498.4 416 59.1
Psat2g185600 Pisum sativum HOM05D005474 ORTHO05D006551 5.1e-139 498.4 423 58.6
Oeu063522.1 Olea europaea HOM05D005474 ORTHO05D006551 1.5e-138 496.9 409 61.9
CAN.G532.121 Capsicum annuum HOM05D005474 ORTHO05D006551 2.5e-138 496.1 421 58.7
Cpa.g.sc128.67 Carica papaya HOM05D005474 ORTHO05D006551 5.6e-138 495.0 414 60.9
Manes.01G049100 Manihot esculenta HOM05D005474 ORTHO05D006551 9.6e-138 494.2 425 58.8
Sopen08g030580 Solanum pennellii HOM05D005474 ORTHO05D006551 2.1e-137 493.0 425 59.5
Nitab4.5_0002782g0080 Nicotiana tabacum HOM05D005474 ORTHO05D006551 1.1e-136 490.7 415 59.8
Phvul.002G164600 Phaseolus vulgaris HOM05D005474 ORTHO05D006551 1.8e-136 490.0 422 59.7
MELO3C005754.2 Cucumis melo HOM05D005474 ORTHO05D006551 3.1e-136 489.2 413 59.6
Ca_24501_v3 Cicer arietinum L. HOM05D005474 ORTHO05D006551 5.2e-136 488.4 424 57.5
Ca_29734_v3 Cicer arietinum L. HOM05D005474 ORTHO05D006551 5.2e-136 488.4 424 57.5
CsaV3_5G001990 Cucumis sativus L. HOM05D005474 ORTHO05D006551 5.2e-136 488.4 413 59.3
Potri.003G140000 Populus trichocarpa HOM05D005474 ORTHO05D006551 5.2e-136 488.4 418 59.6
ClCG01G001840 Citrullus lanatus HOM05D005474 ORTHO05D006551 6.9e-136 488.0 415 59.8
Solyc08g082320.3 Solanum lycopersicum HOM05D005474 ORTHO05D006551 6.9e-136 488.0 425 59.3
Glyma.01G225700 Glycine max HOM05D005474 ORTHO05D006551 1.2e-135 487.3 420 58.8
PGSC0003DMG400012286 Solanum tuberosum HOM05D005474 ORTHO05D006551 1.5e-135 486.9 419 58.7
Medtr5g009240 Medicago truncatula HOM05D005474 ORTHO05D006551 7.6e-135 484.6 414 58.9
SalBow1G1678 Salvia bowleyana HOM05D005474 ORTHO05D006551 1.3e-134 483.8 415 58.8
VMungo1215G0769 Vigna mungo HOM05D005474 ORTHO05D006551 1.3e-134 483.8 418 57.7
Potri.001G091600 Populus trichocarpa HOM05D005474 ORTHO05D006551 2.2e-134 483.0 428 57.9
SalBow1G8106 Salvia bowleyana HOM05D005474 ORTHO05D006551 2.2e-134 483.0 415 58.8
TPR.G25600 Trifolium pratense HOM05D005474 ORTHO05D006551 2.9e-134 482.6 423 56.7
Migut.E01253 Erythranthe guttata HOM05D005474 ORTHO05D006551 8.4e-134 481.1 404 60.9
Sed0020716 Sechium edule HOM05D005474 ORTHO05D006551 8.4e-134 481.1 419 58.0
SGA_v2.0_scaffold144G35858 Striga asiatica HOM05D005474 ORTHO05D006551 8.4e-134 481.1 421 59.1
Lalb_Chr05g0211531 Lupinus albus HOM05D005474 ORTHO05D006551 1.1e-133 480.7 421 57.2
Sabra01G0068000 Salix brachista HOM05D005474 ORTHO05D006551 1.4e-133 480.3 430 58.6
SalBow8G3265 Salvia bowleyana HOM05D005474 ORTHO05D006551 7.1e-133 478.0 412 60.7
TWI12G0204 Tripterygium wilfordii HOM05D005474 ORTHO05D006551 4.6e-132 475.3 422 57.1
TWI56G1439 Tripterygium wilfordii HOM05D005474 ORTHO05D006551 6.0e-132 474.9 427 55.7
Hund14220 Selenicereus undatus HOM05D005474 ORTHO05D006551 6.6e-131 471.5 426 54.7
arahy.Tifrunner.gnm1.ann1.Z0ACGZ Arachis hypogaea HOM05D005474 ORTHO05D006551 1.1e-130 470.7 500 51.0
Lalb_Chr16g0376951 Lupinus albus HOM05D005474 ORTHO05D006551 2.5e-130 469.5 410 57.1
Zm00001eb277940 Zea mays HOM05D005474 ORTHO05D006551 2.5e-130 469.5 408 55.6
Os06g0529800 Oryza sativa ssp. japonica HOM05D005474 ORTHO05D006551 3.3e-130 469.2 406 56.2
PSO063G4762 Papaver somniferum HOM05D005474 ORTHO05D006551 2.1e-129 466.5 402 58.5
Peaxi162Scf00074g00931 Petunia axillaris HOM05D005474 ORTHO05D006551 2.8e-129 466.1 388 60.3
ATR0602G179 Amborella trichopoda HOM05D005474 ORTHO05D006551 3.6e-129 465.7 466 53.4
MSTRG.13885 Avicennia marina HOM05D005474 ORTHO05D006551 3.6e-129 465.7 464 53.2
CiPaw.11G121500 Carya illinoinensis HOM05D005474 ORTHO05D006551 1.1e-128 464.2 393 59.5
AUR62010840 Chenopodium quinoa HOM05D005474 ORTHO05D006551 3.1e-128 462.6 420 54.3
AUR62019839 Chenopodium quinoa HOM05D005474 ORTHO05D006551 9.0e-128 461.1 423 55.3
Glyma.11G017200 Glycine max HOM05D005474 ORTHO05D006551 2.6e-127 459.5 393 58.3
THA.LOC104806435 Tarenaya hassleriana HOM05D005474 ORTHO05D006551 3.4e-127 459.1 411 57.4
LjContig00312_ERROPOS870357g0016174 Lotus japonicus HOM05D005474 ORTHO05D006551 2.2e-126 456.4 415 55.7
arahy.Tifrunner.gnm1.ann1.1UFI8K Arachis hypogaea HOM05D005474 ORTHO05D006551 3.8e-126 455.7 528 48.7
unitig_0.g387 Utricularia gibba HOM05D005474 ORTHO05D006551 2.4e-125 453.0 406 55.9
HPP92_026770 Vanilla planifolia HOM05D005474 ORTHO05D006551 9.3e-125 451.1 421 53.7
CARHR231240 Cardamine hirsuta HOM05D005474 ORTHO05D006551 3.5e-124 449.1 406 54.9
Sc22g0005000 Simmondsia chinensis HOM05D005474 ORTHO05D006551 3.9e-123 445.7 397 56.7
Sp7g21810 Schrenkiella parvula HOM05D005474 ORTHO05D006551 1.1e-122 444.1 412 54.1
Thhalv10025382m.g Eutrema salsugineum HOM05D005474 ORTHO05D006551 1.9e-122 443.4 411 55.7
Oeu034333.1 Olea europaea HOM05D005474 ORTHO05D006551 5.6e-122 441.8 355 62.5
BcaNung01092 Brassica carinata HOM05D005474 ORTHO05D006551 2.8e-121 439.5 408 55.1
Aa31LG6G7070 Aethionema arabicum HOM05D005474 ORTHO05D006551 6.2e-121 438.3 406 54.2
CiPaw.12G083000 Carya illinoinensis HOM05D005474 ORTHO05D006551 8.1e-121 438.0 406 55.9
Sabra03G0101000 Salix brachista HOM05D005474 ORTHO05D006551 5.3e-120 435.3 522 46.7
EL10Ac5g12915 Beta vulgaris HOM05D005474 ORTHO05D006551 7.6e-119 431.4 454 49.6
Carub.0007s1727 Capsella rubella HOM05D005474 ORTHO05D006551 1.3e-118 430.6 426 52.8
BcaC09g50941 Brassica carinata HOM05D005474 ORTHO05D006551 3.8e-118 429.1 407 52.8
C01p19060 Brassica napus HOM05D005474 ORTHO05D006551 3.8e-118 429.1 407 52.8
A01p15160 Brassica napus HOM05D005474 ORTHO05D006551 4.9e-118 428.7 409 53.3
BolC1t01832H Brassica oleracea HOM05D005474 ORTHO05D006551 4.9e-118 428.7 412 53.2
BraA01t01454Z Brassica rapa HOM05D005474 ORTHO05D006551 1.1e-117 427.6 407 52.8
AL7G29500 Arabidopsis lyrata HOM05D005474 ORTHO05D006551 1.6e-116 423.7 458 49.3
AT4G23860 Arabidopsis thaliana HOM05D005474 ORTHO05D006551 3.9e-115 419.1 456 48.9
Hma1.2p1_1746F.1_g300392 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 1.1e-104 384.4 341 58.1
Hma1.2p1_1746F.1_g300400 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 1.1e-104 384.4 341 58.1
Mapoly0095s0049 Marchantia polymorpha HOM05D005474 ORTHO05D006551 2.7e-100 369.8 433 44.3
SMO200G0193 Selaginella moellendorffii HOM05D005474 ORTHO05D006551 7.9e-100 368.2 401 46.9
Pp3c7_4800 Physcomitrium patens HOM05D005474 ORTHO05D006551 7.4e-98 361.7 436 44.0
Pp3c18_8230 Physcomitrium patens HOM05D005474 ORTHO05D006551 1.3e-97 360.9 417 46.5
MBI06_g08456_MAGBIO Magnolia biondii HOM05D005474 ORTHO05D006551 5.5e-93 345.5 237 68.4
Nn3g19016 Nelumbo nucifera HOM05D005474 ORTHO05D006551 4.1e-88 329.3 418 45.7
CDE02G2859 Ceratophyllum demersum HOM05D002290 ORTHO05D002532 4.5e-87 325.9 270 60.7
PGSC0003DMG401028714 Solanum tuberosum HOM05D005474 ORTHO05D006551 7.7e-87 325.1 273 59.7
DCAR_027700 Daucus carota HOM05D005474 ORTHO05D006551 2.0e-79 300.4 418 41.9
CSS0018913 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 3.6e-76 289.7 171 76.0
SEGI_30990 Sequoiadendron giganteum HOM05D005474 ORTHO05D006551 4.7e-76 289.3 424 39.2
TAR636G0569 Trochodendron aralioides HOM05D005474 ORTHO05D006551 3.0e-67 260.0 158 73.4
CSS0034140 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 3.4e-66 256.5 142 78.2
CBR_g50475 Chara braunii HOM05D005474 ORTHO05D006551 9.1e-64 248.4 537 31.8
CSS0004779 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 7.2e-61 238.8 142 76.8
PSO017G5523 Papaver somniferum HOM05D005474 ORTHO05D006551 3.7e-49 199.9 122 69.7
CSS0021446 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 4.4e-42 176.4 90 81.1
PGSC0003DMG400011405 Solanum tuberosum HOM05D005474 ORTHO05D006551 7.0e-40 169.1 195 45.6
unitig_0.g2293 Utricularia gibba HOM05D005474 ORTHO05D006551 4.7e-36 156.4 216 42.1
Duzib084G0281 Durio zibethinus HOM05D005474 ORTHO05D006551 2.1e-28 131.0 81 69.1
Hma1.2p1_1746F.1_g300390 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 9.9e-26 122.1 73 80.8
Hma1.2p1_1746F.1_g300398 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 9.9e-26 122.1 73 80.8
SEGI_08425 Sequoiadendron giganteum HOM05D005474 ORTHO05D006551 1.2e-23 115.2 66 77.3
Ah.07g197430 Amaranthus hybridus HOM05D005474 ORTHO05D006551 6.6e-22 109.4 86 61.6
CDE08G0829 Ceratophyllum demersum HOM05D005474 ORTHO05D006551 4.7e-20 103.2 66 72.7
SHI06991 Sapria himalayana HOM05D005474 ORTHO05D006551 4.7e-20 103.2 59 71.2
Cfa025394 Carpinus fangiana HOM05D005474 ORTHO05D122676 2.1e-15 87.8 199 30.7
MBI18_g28764_MAGBIO Magnolia biondii HOM05D005474 ORTHO05D006551 2.5e-13 80.9 61 65.6
PGSC0003DMG402028714 Solanum tuberosum HOM05D005474 ORTHO05D006551 1.3e-12 78.6 73 52.1
Nitab4.5_0000829g0030 Nicotiana tabacum HOM05D005474 ORTHO05D006551 1.2e-10 72.0 75 50.7
ECA240G3168 Erigeron canadensis HOM05D005474 ORTHO05D006551 6.4e-09 66.2 41 80.5


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