Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G1497 Erigeron canadensis HOM05D002356 ORTHO05D002546 2.6e-141 505.4 250 100.0
ECA240G4646 Erigeron canadensis HOM05D002356 ORTHO05D007307 7.6e-85 317.8 226 75.7
ECA240G2397 Erigeron canadensis HOM05D002356 ORTHO05D002546 1.6e-66 256.9 189 73.0
Lsat_1_v5_gn_3_11200 Lactuca sativa HOM05D002356 ORTHO05D002546 6.7e-33 145.2 233 42.5
HanXRQChr17g0534941 Helianthus annuus HOM05D002356 ORTHO05D002546 2.6e-29 133.3 239 41.0
HanXRQChr03g0083371 Helianthus annuus HOM05D002356 ORTHO05D002546 6.1e-26 122.1 175 45.7
Actinidia22173 Actinidia chinensis HOM05D002356 ORTHO05D002546 9.7e-24 114.8 229 31.4
Dinv37516 Davidia involucrata HOM05D002356 ORTHO05D002546 1.1e-22 111.3 229 32.8
CSS0018780 Camellia sinensis var. sinensis HOM05D002356 ORTHO05D002546 1.8e-22 110.5 226 31.4
CSS0017927 Camellia sinensis var. sinensis HOM05D002356 ORTHO05D002546 2.4e-22 110.2 226 31.4
vmacro11344 Vaccinium macrocarpon HOM05D002356 ORTHO05D002546 2.7e-21 106.7 189 34.9
Nitab4.5_0000798g0060 Nicotiana tabacum HOM05D002356 ORTHO05D002546 3.8e-20 102.8 108 47.2
Peaxi162Scf00074g00626 Petunia axillaris HOM05D002356 ORTHO05D002546 5.0e-20 102.4 108 48.1
Cc08_g16250 Coffea canephora HOM05D002356 ORTHO05D002546 6.5e-20 102.1 112 43.8
Nitab4.5_0005962g0030 Nicotiana tabacum HOM05D002356 ORTHO05D002546 8.5e-20 101.7 108 47.2
Duzib068G0700 Durio zibethinus HOM05D002356 ORTHO05D002546 1.1e-19 101.3 131 40.5
Ciclev10024632m.g Citrus clementina HOM05D002356 ORTHO05D002546 1.9e-19 100.5 108 43.5
SGA_v2.0_scaffold726G53520 Striga asiatica HOM05D002356 ORTHO05D002546 3.2e-19 99.8 110 42.7
Thecc.03G300500 Theobroma cacao HOM05D002356 ORTHO05D002546 3.2e-19 99.8 110 43.6
Haze_09088 Corylus avellana HOM05D002356 ORTHO05D002546 7.2e-19 98.6 110 46.4
Cfa011984 Carpinus fangiana HOM05D002356 ORTHO05D002546 1.6e-18 97.4 110 45.5
Atru.chr9.1925 Acer truncatum HOM05D002356 ORTHO05D002546 2.1e-18 97.1 110 42.7
FAN13G1079 Fragaria x ananassa HOM05D002356 ORTHO05D007406 3.6e-18 96.3 249 28.1
LjContig00222g0002051 Lotus japonicus HOM05D002356 ORTHO05D002546 4.7e-18 95.9 108 41.7
MD06G1109600 Malus domestica HOM05D002356 ORTHO05D002546 1.0e-17 94.7 253 28.5
FAN08G0678 Fragaria x ananassa HOM05D002356 ORTHO05D007406 1.8e-17 94.0 249 27.7
MSTRG.11914 Avicennia marina HOM05D002356 ORTHO05D002546 4.0e-17 92.8 110 41.8
DCAR_030608 Daucus carota HOM05D002356 ORTHO05D002546 6.8e-17 92.0 235 28.5
GSVIVG01019558001 Vitis vinifera HOM05D002356 ORTHO05D002546 6.8e-17 92.0 110 40.9
TWI15G0564 Tripterygium wilfordii HOM05D002356 ORTHO05D002546 2.0e-16 90.5 110 40.9
Glyma.11G016300 Glycine max HOM05D002356 ORTHO05D002546 4.4e-16 89.4 108 40.7
TAR629G2074 Trochodendron aralioides HOM05D002356 ORTHO05D002546 4.4e-16 89.4 121 39.7
Phvul.002G165300 Phaseolus vulgaris HOM05D002356 ORTHO05D002546 5.7e-16 89.0 110 37.3
unitig_748.g7409 Utricularia gibba HOM05D002356 ORTHO05D002546 5.7e-16 89.0 124 34.7
Prupe.5G122600 Prunus persica HOM05D002356 ORTHO05D002546 7.5e-16 88.6 236 28.4
SalBow1G7163 Salvia bowleyana HOM05D002356 ORTHO05D002546 9.8e-16 88.2 110 40.0
Glyma.01G226400 Glycine max HOM05D002356 ORTHO05D002546 1.7e-15 87.4 108 38.9
Lj2A164G51 Lonicera japonica HOM05D002356 ORTHO05D002546 2.8e-15 86.7 233 29.6
ClCG01G001740 Citrullus lanatus HOM05D002356 ORTHO05D002546 3.7e-15 86.3 229 27.1
VMungo1215G0377 Vigna mungo HOM05D002356 ORTHO05D002546 3.7e-15 86.3 108 37.0
Psat2g186000 Pisum sativum HOM05D002356 ORTHO05D002546 6.3e-15 85.5 108 37.0
Potri.003G141500 Populus trichocarpa HOM05D002356 ORTHO05D002546 6.3e-15 85.5 101 40.6
CANSAT21G0917 Cannabis sativa HOM05D002356 ORTHO05D002546 8.3e-15 85.1 108 42.6
CsaV3_5G001880 Cucumis sativus L. HOM05D002356 ORTHO05D002546 1.1e-14 84.7 226 27.0
Sed0005802 Sechium edule HOM05D002356 ORTHO05D002546 9.1e-14 81.6 165 29.1
FAN18G2206 Fragaria x ananassa HOM05D002356 ORTHO05D007406 3.5e-13 79.7 249 25.7
CAN.G567.10 Capsicum annuum HOM05D002356 ORTHO05D002546 4.5e-13 79.3 229 27.9
PSO063G4681 Papaver somniferum HOM05D002356 ORTHO05D002546 4.5e-13 79.3 110 36.4
MBI06_g44796_MAGBIO Magnolia biondii HOM05D002356 ORTHO05D002546 5.9e-13 79.0 108 38.0
Nn1g00254 Nelumbo nucifera HOM05D002356 ORTHO05D002546 5.9e-13 79.0 109 36.7
RcHm_v2.0_Chr7g0194211 Rosa chinensis HOM05D002356 ORTHO05D002546 7.7e-13 78.6 101 40.6
FAN04G1057 Fragaria x ananassa HOM05D002356 ORTHO05D007406 1.3e-12 77.8 244 25.4
Oeu055031.1 Olea europaea HOM05D002356 ORTHO05D002546 1.3e-12 77.8 81 50.6
Sed0017112 Sechium edule HOM05D002356 ORTHO05D002546 1.7e-12 77.4 163 27.6
CSS0009774 Camellia sinensis var. sinensis HOM05D002356 ORTHO05D002546 3.8e-12 76.3 192 29.7
Eucgr.E00881 Eucalyptus grandis HOM05D002356 ORTHO05D002546 3.8e-12 76.3 110 36.4
Gorai.003G078500 Gossypium raimondii HOM05D002356 ORTHO05D002546 3.8e-12 76.3 110 34.5
Ah.12g052680 Amaranthus hybridus HOM05D002356 ORTHO05D002546 6.5e-12 75.5 131 33.6
Sabra01G0066100 Salix brachista HOM05D002356 ORTHO05D002546 8.6e-12 75.1 110 36.4
Potri.001G089700 Populus trichocarpa HOM05D002356 ORTHO05D002546 1.1e-11 74.7 100 39.0
FvH4_5g04871 Fragaria vesca HOM05D002356 ORTHO05D002546 2.5e-11 73.6 131 32.8
arahy.Tifrunner.gnm1.ann1.6P6FL8 Arachis hypogaea HOM05D002356 ORTHO05D002546 4.2e-11 72.8 107 35.5
arahy.Tifrunner.gnm1.ann1.Q3JEBE Arachis hypogaea HOM05D002356 ORTHO05D002546 5.5e-11 72.4 107 35.5
TPR.G37955 Trifolium pratense HOM05D002356 ORTHO05D002546 5.5e-11 72.4 108 35.2
ECA234G0866 Erigeron canadensis HOM05D034482 ORTHO05D186716 1.2e-10 71.2 37 83.8
Gohir.D03G084100 Gossypium hirsutum HOM05D002356 ORTHO05D002546 4.7e-10 69.3 110 30.9
Lalb_Chr16g0376881 Lupinus albus HOM05D002356 ORTHO05D002546 4.7e-10 69.3 110 33.6
EL10Ac5g12936 Beta vulgaris HOM05D002356 ORTHO05D002546 8.0e-10 68.6 110 32.7
Cpa.g.sc79.9 Carica papaya HOM05D002356 ORTHO05D002546 1.4e-09 67.8 244 24.2
Lsat_1_v5_gn_6_83700 Lactuca sativa HOM05D002356 ORTHO05D002546 1.4e-09 67.8 139 36.7
Gohir.A02G099600 Gossypium hirsutum HOM05D002356 ORTHO05D002546 1.8e-09 67.4 110 30.0
Manes.02G008500 Manihot esculenta HOM05D002356 ORTHO05D002546 1.8e-09 67.4 205 28.3
CiPaw.12G081500 Carya illinoinensis HOM05D002356 ORTHO05D002546 2.3e-09 67.0 190 30.0
Thhalv10027053m.g Eutrema salsugineum HOM05D002356 ORTHO05D002546 4.0e-09 66.2 141 30.5
QL02p030067 Quercus lobata HOM05D002356 ORTHO05D002546 8.8e-09 65.1 250 22.8
AT4G23950 Arabidopsis thaliana HOM05D002356 ORTHO05D002546 1.2e-08 64.7 146 30.1
A01p15250 Brassica napus HOM05D002356 ORTHO05D007406 1.2e-08 64.7 141 30.5
CARHR231370 Cardamine hirsuta HOM05D002356 ORTHO05D002546 1.2e-08 64.7 147 28.6
BraA01t01465Z Brassica rapa HOM05D002356 ORTHO05D007406 1.5e-08 64.3 141 30.5
PSO170G5396 Papaver somniferum HOM05D002356 ORTHO05D002546 2.0e-08 63.9 114 30.7
THA.LOC104806441 Tarenaya hassleriana HOM05D002356 ORTHO05D002546 2.0e-08 63.9 181 26.0
AL7G29360 Arabidopsis lyrata HOM05D002356 ORTHO05D002546 2.6e-08 63.5 146 30.1
BcaC09g50927 Brassica carinata HOM05D002356 ORTHO05D002546 2.6e-08 63.5 137 29.9
BolC1t01844H Brassica oleracea HOM05D002356 ORTHO05D007406 2.6e-08 63.5 137 29.9
PGR042G0815 Punica granatum HOM05D002356 ORTHO05D002546 2.6e-08 63.5 108 29.6
Migut.C01394 Erythranthe guttata HOM05D002356 ORTHO05D002546 3.4e-08 63.2 152 25.7
Sp7g21920 Schrenkiella parvula HOM05D002356 ORTHO05D002546 3.4e-08 63.2 137 29.9
C01p19180 Brassica napus HOM05D002356 ORTHO05D007406 4.4e-08 62.8 137 30.7
Ciclev10019431m.g Citrus clementina HOM05D002356 ORTHO05D002546 4.4e-08 62.8 127 25.2
PSO017G6296 Papaver somniferum HOM05D002356 ORTHO05D002546 5.7e-08 62.4 114 29.8
TAR636G0446 Trochodendron aralioides HOM05D002356 ORTHO05D002546 7.5e-08 62.0 74 37.8
vmacro00945 Vaccinium macrocarpon HOM05D002356 ORTHO05D002546 7.5e-08 62.0 107 30.8
Thecc.08G181300 Theobroma cacao HOM05D002356 ORTHO05D002546 9.8e-08 61.6 129 24.8
CSS0011212 Camellia sinensis var. sinensis HOM05D002356 ORTHO05D002546 1.3e-07 61.2 112 28.6
AUR62038536 Chenopodium quinoa HOM05D002356 ORTHO05D002546 1.7e-07 60.8 115 30.4
AUR62013385 Chenopodium quinoa HOM05D002356 ORTHO05D002546 2.8e-07 60.1 115 30.4
MBI06_g32156_MAGBIO Magnolia biondii HOM05D002356 ORTHO05D002546 2.8e-07 60.1 112 28.6
ECA233G4417 Erigeron canadensis HOM05D002406 ORTHO05D007964 3.7e-07 59.7 73 41.1
ECA246G0396 Erigeron canadensis HOM05D002356 ORTHO05D002546 3.7e-07 59.7 123 31.7
PGR042G1872 Punica granatum HOM05D002356 ORTHO05D002546 3.7e-07 59.7 110 31.8
ECA240G3479 Erigeron canadensis HOM05D000316 ORTHO05D000374 6.3e-07 58.9 43 65.1
Migut.A00622 Erythranthe guttata HOM05D002356 ORTHO05D002546 6.3e-07 58.9 224 24.6
HanXRQChr11g0343561 Helianthus annuus HOM05D002356 ORTHO05D002546 6.3e-07 58.9 107 26.2
Sopen11g020600 Solanum pennellii HOM05D002356 ORTHO05D002546 6.3e-07 58.9 145 27.6
GSVIVG01037194001 Vitis vinifera HOM05D002356 ORTHO05D002546 6.3e-07 58.9 109 28.4
Peaxi162Scf00078g00927 Petunia axillaris HOM05D002356 ORTHO05D002546 8.3e-07 58.5 145 28.3
PGSC0003DMG400022869 Solanum tuberosum HOM05D002356 ORTHO05D002546 8.3e-07 58.5 145 27.6
MSTRG.1605 Avicennia marina HOM05D002356 ORTHO05D002546 1.1e-06 58.2 151 26.5
ECA234G2877 Erigeron canadensis HOM05D009093 ORTHO05D010576 1.1e-06 58.2 31 80.6
Solyc08g082540.3 Solanum lycopersicum HOM05D002356 ORTHO05D002546 1.1e-06 58.2 110 30.9
Sopen08g030800 Solanum pennellii HOM05D002356 ORTHO05D002546 1.1e-06 58.2 110 30.9
Phvul.005G002700 Phaseolus vulgaris HOM05D002356 ORTHO05D002546 1.4e-06 57.8 90 32.2
Hund26942 Selenicereus undatus HOM05D002356 ORTHO05D002546 1.4e-06 57.8 109 31.2
EL10Ac1g01276 Beta vulgaris HOM05D002356 ORTHO05D002546 1.8e-06 57.4 115 27.0
SGA_v2.0_scaffold118G32635 Striga asiatica HOM05D002356 ORTHO05D002546 1.8e-06 57.4 146 30.1
ECA240G1578 Erigeron canadensis HOM05D011820 ORTHO05D000204 2.4e-06 57.0 46 56.5
Eucgr.F02937 Eucalyptus grandis HOM05D002356 ORTHO05D002546 2.4e-06 57.0 104 26.9
SGA_v2.0_scaffold443G51685 Striga asiatica HOM05D002356 ORTHO05D002546 2.4e-06 57.0 146 30.1
MSTRG.25502 Avicennia marina HOM05D002356 ORTHO05D002546 3.1e-06 56.6 101 32.7
Nn5g27351 Nelumbo nucifera HOM05D002356 ORTHO05D002546 4.1e-06 56.2 112 24.1
PSO782G3205 Papaver somniferum HOM05D002356 ORTHO05D002546 4.1e-06 56.2 114 28.1
ECA232G4011 Erigeron canadensis HOM05D000323 ORTHO05D000201 7.0e-06 55.5 32 71.9
ECA246G3632 Erigeron canadensis HOM05D011820 ORTHO05D188429 7.0e-06 55.5 34 64.7
PGSC0003DMG400012268 Solanum tuberosum HOM05D002356 ORTHO05D002546 7.0e-06 55.5 241 24.9
Atru.chr13.2536 Acer truncatum HOM05D002356 ORTHO05D002546 9.2e-06 55.1 127 24.4
Dinv37402 Davidia involucrata HOM05D002356 ORTHO05D002546 9.2e-06 55.1 112 25.0
ECA247G0654 Erigeron canadensis HOM05D011820 ORTHO05D004022 9.2e-06 55.1 41 58.5
Lj7A416G39 Lonicera japonica HOM05D002356 ORTHO05D002546 9.2e-06 55.1 133 25.6
PGR102G0719 Punica granatum HOM05D002356 ORTHO05D002546 9.2e-06 55.1 115 28.7
TAR381G0803 Trochodendron aralioides HOM05D002356 ORTHO05D002546 9.2e-06 55.1 112 26.8
HPP92_002036 Vanilla planifolia HOM05D002356 ORTHO05D002546 9.2e-06 55.1 112 30.4


User provided reference genes

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