Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 1.1e-270 936.0 468 100.0
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 3.3e-182 642.1 466 71.0
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 4.5e-163 578.6 476 62.6
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 2.4e-161 572.8 463 62.2
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 9.3e-161 570.9 463 61.8
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 1.9e-158 563.1 467 60.6
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 7.4e-158 561.2 465 60.6
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 1.4e-156 557.0 430 64.9
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 1.8e-156 556.6 464 62.5
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 3.1e-156 555.8 465 60.2
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 1.2e-155 553.9 465 60.2
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 5.8e-155 551.6 449 62.1
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 7.6e-155 551.2 462 61.5
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 1.0e-154 550.8 451 61.0
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 1.0e-154 550.8 470 61.1
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.7e-154 550.1 465 60.2
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 1.7e-154 550.1 461 61.2
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 2.9e-154 549.3 448 61.6
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 1.1e-153 547.4 463 60.5
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 5.5e-153 545.0 463 59.8
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 9.3e-153 544.3 446 61.4
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 9.3e-153 544.3 446 61.7
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 1.6e-152 543.5 462 60.0
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 2.1e-152 543.1 429 63.9
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.1e-152 543.1 465 59.8
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 2.7e-152 542.7 434 62.7
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 1.8e-151 540.0 467 59.3
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 3.9e-151 538.9 470 58.1
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 5.7e-150 535.0 435 62.3
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 1.8e-148 530.0 465 56.8
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 1.8e-148 530.0 439 59.9
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 2.4e-148 529.6 430 62.1
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 4.0e-148 528.9 437 60.2
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 6.9e-148 528.1 463 57.5
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 9.0e-148 527.7 450 58.9
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.5e-147 526.9 438 61.0
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 5.8e-147 525.0 464 58.8
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 7.6e-147 524.6 468 56.2
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 1.3e-146 523.9 434 60.8
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 3.8e-146 522.3 463 58.3
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 8.4e-146 521.2 400 64.8
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 1.9e-145 520.0 483 55.1
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 3.2e-145 519.2 411 61.6
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 5.5e-145 518.5 434 60.4
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 4.6e-144 515.4 449 57.0
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.0e-143 514.2 455 57.1
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 1.3e-143 513.8 446 59.9
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 1.3e-143 513.8 474 55.5
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 3.9e-143 512.3 434 60.1
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 5.1e-143 511.9 442 58.4
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 2.5e-142 509.6 458 58.7
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 3.3e-142 509.2 461 57.3
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 4.3e-142 508.8 456 57.2
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 5.7e-142 508.4 458 57.6
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 1.3e-141 507.3 448 58.7
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 2.8e-141 506.1 443 59.1
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 4.8e-141 505.4 433 59.4
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 6.3e-141 505.0 466 56.9
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 3.1e-140 502.7 434 58.3
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 1.5e-139 500.4 431 58.9
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 2.0e-139 500.0 400 62.5
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 1.3e-138 497.3 452 56.9
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 3.8e-138 495.7 467 56.1
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 8.5e-138 494.6 450 57.8
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 2.5e-137 493.0 446 57.0
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 4.6e-136 488.8 448 57.1
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 4.6e-136 488.8 448 56.5
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 3.9e-135 485.7 460 54.8
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 8.8e-135 484.6 449 57.0
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 1.1e-134 484.2 449 57.0
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 1.1e-134 484.2 454 55.9
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 1.8e-132 476.9 470 55.1
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 2.4e-132 476.5 462 55.0
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 7.2e-129 464.9 421 57.0
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 2.1e-128 463.4 472 53.4
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 4.7e-128 462.2 501 51.5
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 1.0e-122 444.5 365 62.7
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 1.3e-122 444.1 428 52.6
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 2.5e-121 439.9 452 54.0
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 5.5e-121 438.7 448 52.2
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 1.8e-119 433.7 447 51.5
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 1.8e-119 433.7 754 38.1
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 3.9e-119 432.6 316 69.9
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 9.7e-118 427.9 433 52.2
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 2.8e-117 426.4 501 48.1
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 2.0e-115 420.2 433 48.0
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 3.5e-115 419.5 437 50.1
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 1.5e-113 414.1 378 57.4
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 2.3e-103 380.2 368 51.1
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 5.2e-103 379.0 332 56.3
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 2.4e-100 370.2 303 59.1
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 5.4e-100 369.0 325 54.8
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 6.1e-96 355.5 369 49.1
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 1.8e-95 354.0 304 56.9
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 1.2e-94 351.3 394 46.2
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 1.2e-94 351.3 318 55.7
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 7.0e-92 342.0 312 57.7
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 4.7e-88 329.3 430 44.4
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 4.9e-85 319.3 314 54.5
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 9.2e-84 315.1 318 53.5
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.6e-80 303.1 401 45.1
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 7.5e-78 295.4 238 61.8
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 3.7e-69 266.5 240 55.4
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 3.5e-67 260.0 353 43.6
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.1e-65 255.0 453 39.7
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 4.3e-65 253.1 228 59.2
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 1.5e-62 244.6 214 58.4
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 2.2e-61 240.7 219 56.6
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 6.9e-55 219.2 211 56.4
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 1.4e-47 194.9 173 56.6
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 2.0e-46 191.0 230 46.5
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.4e-44 184.1 170 54.7
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 2.8e-40 170.6 127 62.2
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 9.0e-39 165.6 109 78.0
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.3e-37 161.8 121 66.9
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 6.7e-34 149.4 144 58.3
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 3.1e-31 140.6 134 58.2
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 3.5e-27 127.1 130 55.4
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 6.5e-21 106.3 75 73.3
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 7.9e-19 99.4 408 24.5
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 2.3e-18 97.8 95 48.4
Mapoly0062s0088 Marchantia polymorpha HOM05D005800 ORTHO05D026664 1.1e-17 95.5 399 22.6
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 3.1e-15 87.4 117 41.0
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 2.0e-14 84.7 377 24.4
AagrBONN_evm.TU.Sc2ySwM_344.931 Anthoceros agrestis HOM05D005800 ORTHO05D026664 6.5e-13 79.7 399 22.8
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 7.9e-11 72.8 79 46.8
COL.COLO4_04205 Corchorus olitorius HOM05D005800 ORTHO05D007636 9.1e-07 59.3 45 60.0


User provided reference genes

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