Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 2.0e-177 625.5 298 100.0
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 5.2e-141 504.6 282 83.3
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 5.8e-116 421.4 275 68.7
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 9.9e-116 420.6 297 64.6
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 2.4e-114 416.0 280 67.1
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 1.2e-113 413.7 280 68.6
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 3.5e-113 412.1 281 66.5
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 5.1e-112 408.3 281 66.9
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 6.6e-112 407.9 281 65.8
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 1.5e-111 406.8 294 60.5
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 5.6e-111 404.8 280 66.1
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 9.6e-111 404.1 302 63.9
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 8.1e-110 401.0 292 63.4
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 6.9e-109 397.9 281 64.1
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 6.9e-109 397.9 293 62.1
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 2.0e-108 396.4 281 64.1
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 4.4e-108 395.2 288 63.5
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 4.9e-107 391.7 280 65.7
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 4.9e-107 391.7 292 61.0
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 6.4e-107 391.3 291 61.2
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 3.2e-106 389.0 294 61.2
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 4.2e-106 388.7 271 63.1
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 4.2e-106 388.7 293 60.1
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 9.3e-106 387.5 288 62.2
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 9.3e-106 387.5 280 63.9
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 1.7e-104 383.3 267 63.7
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 3.9e-104 382.1 297 59.6
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 1.5e-103 380.2 275 62.5
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 5.6e-103 378.3 295 59.7
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 7.4e-103 377.9 288 60.4
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 1.6e-102 376.7 294 59.5
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 4.8e-102 375.2 275 61.1
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 1.4e-101 373.6 280 62.1
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 1.8e-101 373.2 273 63.0
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 4.0e-101 372.1 300 58.0
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 6.9e-101 371.3 290 60.0
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 6.9e-101 371.3 290 60.0
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 1.2e-100 370.5 284 60.6
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 1.5e-100 370.2 288 60.8
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 7.6e-100 367.9 281 60.9
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 7.6e-100 367.9 288 60.1
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 1.7e-99 366.7 281 60.5
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 1.7e-99 366.7 273 61.2
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 1.6e-97 360.1 275 58.9
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 8.7e-96 354.4 277 60.3
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 3.3e-95 352.4 243 65.0
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 7.4e-95 351.3 237 68.4
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 1.6e-94 350.1 280 58.2
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 3.1e-93 345.9 273 58.6
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 4.5e-92 342.0 282 57.8
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 7.6e-92 341.3 280 58.9
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 2.5e-90 336.3 234 63.7
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 4.2e-90 335.5 276 56.9
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 5.5e-90 335.1 288 56.6
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 6.0e-89 331.6 278 55.8
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 1.0e-88 330.9 281 52.0
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 4.3e-87 325.5 272 52.9
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 1.5e-84 317.0 243 60.9
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 1.2e-81 307.4 259 56.4
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.5e-79 300.4 320 49.1
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 2.5e-79 299.7 209 66.5
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 2.6e-76 289.7 272 49.3
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 3.6e-73 279.3 223 58.3
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 1.1e-71 274.2 224 56.2
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 7.4e-71 271.6 216 58.3
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 6.3e-70 268.5 219 60.3
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 1.8e-64 250.4 361 40.4
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 7.4e-63 245.0 280 44.3
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 2.2e-62 243.4 271 41.3
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 5.9e-60 235.3 275 40.0
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 1.0e-59 234.6 218 50.9
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 3.6e-57 226.1 273 37.0
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 3.0e-56 223.0 210 50.0
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 5.3e-53 212.2 228 49.1
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 2.2e-38 163.7 110 62.7
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 1.7e-35 154.1 104 69.2
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 8.0e-33 145.2 148 48.6
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 5.2e-24 115.9 260 30.8
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 8.9e-24 115.2 174 40.2
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 7.5e-23 112.1 62 77.4
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 1.4e-16 91.3 61 68.9
MBI01_g18879_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 6.2e-09 65.9 40 65.0
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 2.6e-07 60.5 41 63.4
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 2.9e-06 57.0 92 32.6


User provided reference genes

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