Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 1.1e-56 223.0 105 100.0
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 1.5e-50 202.6 102 90.2
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 3.6e-44 181.4 104 76.9
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 7.9e-44 180.3 104 76.9
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 1.4e-43 179.5 104 76.9
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 3.9e-43 177.9 104 75.0
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 6.7e-43 177.2 104 76.0
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 6.7e-43 177.2 104 76.0
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 6.7e-43 177.2 104 76.0
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 6.7e-43 177.2 104 76.0
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 6.7e-43 177.2 104 76.0
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 6.7e-43 177.2 104 76.0
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 8.8e-43 176.8 104 74.0
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 1.5e-42 176.0 104 75.0
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 3.3e-42 174.9 104 75.0
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.3e-42 174.9 104 76.0
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 7.4e-42 173.7 102 75.5
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 7.4e-42 173.7 103 74.8
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 1.3e-41 172.9 103 75.7
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 2.2e-41 172.2 104 75.0
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 2.8e-41 171.8 103 73.8
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 4.8e-41 171.0 104 71.2
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 4.8e-41 171.0 103 71.8
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 6.3e-41 170.6 103 72.8
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 1.1e-40 169.9 104 74.0
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.8e-40 169.1 103 72.8
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 1.8e-40 169.1 104 73.1
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 2.4e-40 168.7 103 73.8
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.4e-40 168.7 103 72.8
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 2.4e-40 168.7 99 76.8
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 2.4e-40 168.7 103 73.8
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 5.3e-40 167.5 102 72.5
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 5.3e-40 167.5 103 72.8
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 5.3e-40 167.5 99 74.7
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 5.3e-40 167.5 99 74.7
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 5.3e-40 167.5 103 71.8
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 9.1e-40 166.8 103 70.9
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 9.1e-40 166.8 103 70.9
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 9.1e-40 166.8 105 74.3
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 1.2e-39 166.4 103 72.8
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 1.5e-39 166.0 103 71.8
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 1.5e-39 166.0 103 68.9
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 1.5e-39 166.0 103 69.9
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 2.0e-39 165.6 101 73.3
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 2.6e-39 165.2 104 74.0
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 2.6e-39 165.2 101 70.3
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 3.4e-39 164.9 102 71.6
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 5.9e-39 164.1 101 71.3
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 1.0e-38 163.3 104 71.2
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 1.0e-38 163.3 104 69.2
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 1.3e-38 162.9 103 69.9
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 1.7e-38 162.5 101 70.3
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 2.2e-38 162.2 100 72.0
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 2.9e-38 161.8 101 70.3
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 2.9e-38 161.8 104 69.2
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 2.9e-38 161.8 100 71.0
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 2.9e-38 161.8 100 71.0
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 3.8e-38 161.4 103 68.9
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 3.8e-38 161.4 104 70.2
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 3.8e-38 161.4 103 68.0
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 5.0e-38 161.0 99 72.7
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 5.0e-38 161.0 103 68.9
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 6.5e-38 160.6 103 70.9
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 8.5e-38 160.2 101 70.3
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 8.5e-38 160.2 103 68.0
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 1.1e-37 159.8 106 68.9
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 1.1e-37 159.8 103 69.9
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 1.4e-37 159.5 103 68.9
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.4e-37 159.5 101 72.3
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.9e-37 159.1 101 72.3
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 2.5e-37 158.7 99 69.7
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 4.2e-37 157.9 101 69.3
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 4.2e-37 157.9 96 72.9
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 5.5e-37 157.5 104 69.2
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 5.5e-37 157.5 101 72.3
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 5.5e-37 157.5 103 66.0
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 5.5e-37 157.5 103 68.9
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 9.4e-37 156.8 103 66.0
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 9.4e-37 156.8 103 66.0
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.2e-36 156.4 99 68.7
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.2e-36 156.4 103 65.0
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 1.2e-36 156.4 103 69.9
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 2.1e-36 155.6 102 67.6
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 2.7e-36 155.2 103 67.0
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 4.7e-36 154.5 100 71.0
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.0e-35 153.3 103 66.0
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.0e-35 153.3 101 68.3
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 1.0e-35 153.3 101 69.3
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 1.4e-35 152.9 101 68.3
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 2.3e-35 152.1 103 65.0
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 3.0e-35 151.8 101 70.3
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 1.1e-34 149.8 106 65.1
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 1.5e-34 149.4 103 64.1
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 9.7e-34 146.7 111 64.9
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.2e-31 139.8 96 63.5
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.7e-30 136.0 103 57.3
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 3.8e-30 134.8 101 59.4
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 3.8e-30 134.8 103 57.3
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 3.2e-29 131.7 101 57.4
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 4.2e-29 131.3 101 58.4
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 5.5e-29 131.0 102 60.8
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 5.5e-29 131.0 102 60.8
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 9.4e-29 130.2 103 55.3
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 1.2e-28 129.8 101 57.4
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 1.2e-28 129.8 103 58.3
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.6e-28 129.4 103 55.3
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.1e-28 129.0 101 57.4
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 2.1e-28 129.0 100 56.0
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 2.7e-28 128.6 100 56.0
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 2.7e-28 128.6 119 55.5
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 3.6e-28 128.3 101 55.4
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 6.1e-28 127.5 101 57.4
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 6.1e-28 127.5 101 57.4
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 8.0e-28 127.1 98 58.2
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 1.0e-27 126.7 100 60.0
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 1.0e-27 126.7 103 55.3
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.0e-27 126.7 101 57.4
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 1.0e-27 126.7 98 57.1
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 1.4e-27 126.3 100 57.0
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 1.8e-27 125.9 103 52.4
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.8e-27 125.9 101 55.4
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.8e-27 125.9 100 56.0
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 1.8e-27 125.9 101 54.5
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 2.3e-27 125.6 101 55.4
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 3.0e-27 125.2 98 58.2
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 3.0e-27 125.2 101 55.4
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 3.0e-27 125.2 103 54.4
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 4.0e-27 124.8 101 56.4
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 4.0e-27 124.8 103 54.4
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 6.7e-27 124.0 98 56.1
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 1.1e-26 123.2 103 54.4
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 1.5e-26 122.9 101 54.5
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 3.3e-26 121.7 101 54.5
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 5.7e-26 120.9 102 53.9
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 7.5e-26 120.6 104 53.8
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 7.5e-26 120.6 103 51.5
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 7.5e-26 120.6 98 55.1
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 9.7e-26 120.2 101 52.5
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 9.7e-26 120.2 100 51.0
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 1.7e-25 119.4 101 52.5
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 2.8e-25 118.6 101 52.5
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 2.8e-25 118.6 100 52.0
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 1.1e-24 116.7 101 52.5
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 4.1e-24 114.8 100 52.0
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 4.1e-24 114.8 93 57.0
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 2.0e-23 112.5 93 53.8
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 1.0e-22 110.2 118 44.9
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.3e-22 109.8 92 52.2
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 1.3e-22 109.8 102 48.0
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 1.3e-22 109.8 129 42.6
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 2.9e-22 108.6 102 47.1
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 6.5e-22 107.5 62 72.6
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 8.5e-22 107.1 101 52.5
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 8.5e-22 107.1 100 49.0
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 2.5e-21 105.5 92 52.2
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 3.2e-21 105.1 83 59.0
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 4.2e-21 104.8 61 73.8
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 1.2e-20 103.2 109 45.9
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 1.2e-20 103.2 109 45.9
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 6.8e-19 97.4 59 67.8
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 2.0e-18 95.9 94 45.7
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 4.4e-18 94.7 56 67.9
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 5.7e-18 94.4 185 31.4
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 1.8e-16 89.4 103 43.7
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 7.0e-16 87.4 101 46.5
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 1.2e-15 86.7 98 49.0
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 2.7e-15 85.5 208 27.9
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 3.5e-15 85.1 60 55.0
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 3.0e-11 72.0 95 37.9
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 4.0e-11 71.6 76 42.1
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 2.4e-08 62.4 43 67.4
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 6.6e-06 54.3 43 60.5


User provided reference genes

Program Settings