Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 3.4e-189 664.8 339 100.0
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 1.9e-139 499.6 342 75.7
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 4.7e-138 495.0 342 75.7
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 2.3e-113 412.9 325 67.4
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 1.5e-112 410.2 323 65.6
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.4e-110 403.7 323 64.7
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.4e-110 403.7 323 64.7
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 3.5e-109 399.1 323 63.8
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 1.7e-108 396.7 325 65.2
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 2.3e-108 396.4 323 63.2
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 1.2e-106 390.6 332 61.4
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 2.4e-105 386.3 328 61.3
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 2.4e-105 386.3 328 61.3
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 2.6e-104 382.9 323 62.8
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 5.8e-104 381.7 338 60.1
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 1.7e-103 380.2 314 64.6
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 6.4e-103 378.3 323 62.5
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 2.4e-102 376.3 332 60.2
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 3.2e-102 375.9 328 60.7
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 3.2e-102 375.9 337 61.1
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 4.2e-102 375.6 329 60.5
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 4.2e-102 375.6 331 59.8
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 5.4e-102 375.2 327 60.6
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.2e-101 374.0 324 61.4
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 2.1e-101 373.2 332 58.1
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 3.5e-101 372.5 328 59.8
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 6.0e-101 371.7 333 59.2
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 3.9e-100 369.0 335 58.8
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 3.9e-100 369.0 266 68.8
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 6.6e-100 368.2 326 59.5
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 6.6e-100 368.2 331 58.0
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 1.5e-99 367.1 324 59.0
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.5e-99 366.3 328 57.9
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 2.5e-99 366.3 319 61.4
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 3.3e-99 365.9 323 61.0
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 3.3e-99 365.9 324 60.2
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 4.3e-99 365.5 332 57.2
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 4.3e-99 365.5 332 58.4
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 7.3e-99 364.8 323 59.1
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 7.3e-99 364.8 292 64.4
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 3.6e-98 362.5 323 59.4
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 4.7e-98 362.1 327 57.2
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.7e-98 362.1 323 59.4
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 4.7e-98 362.1 334 57.8
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 6.2e-98 361.7 323 59.4
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 8.1e-98 361.3 332 56.6
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 8.1e-98 361.3 343 56.3
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.1e-97 360.9 323 59.4
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 1.4e-97 360.5 329 58.7
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.8e-97 360.1 323 58.5
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 1.8e-97 360.1 327 59.3
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 2.4e-97 359.8 326 58.0
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.1e-97 359.4 323 59.1
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 3.1e-97 359.4 332 56.3
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 3.1e-97 359.4 331 56.8
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 5.3e-97 358.6 330 57.3
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.2e-96 357.5 327 57.8
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.5e-96 357.1 323 58.5
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 5.8e-96 355.1 323 58.2
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 1.3e-95 354.0 324 56.5
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 2.2e-95 353.2 346 57.2
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 4.9e-95 352.1 325 58.5
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 1.4e-94 350.5 329 56.8
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 9.3e-94 347.8 333 58.3
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 1.2e-93 347.4 325 57.2
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 7.8e-93 344.7 323 55.4
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 3.9e-92 342.4 323 55.4
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 1.1e-91 340.9 323 55.4
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 1.5e-91 340.5 327 57.8
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 1.5e-91 340.5 327 54.4
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.9e-91 340.1 322 55.9
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 1.9e-91 340.1 326 55.2
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 3.3e-91 339.3 321 55.8
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 3.3e-91 339.3 322 55.6
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 4.3e-91 339.0 323 55.7
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 2.1e-90 336.7 325 54.8
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 4.8e-90 335.5 323 54.5
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 6.2e-90 335.1 325 55.1
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 3.1e-89 332.8 323 53.9
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 3.1e-89 332.8 326 53.1
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 4.0e-89 332.4 325 54.8
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 4.5e-88 328.9 323 53.3
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 8.4e-87 324.7 267 62.9
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.1e-86 324.3 303 56.1
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 1.9e-86 323.6 323 53.9
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 9.3e-86 321.2 239 66.5
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 4.6e-85 318.9 303 55.1
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 1.1e-81 307.8 271 59.0
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 9.0e-81 304.7 323 52.0
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 2.5e-75 286.6 335 49.0
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 1.1e-73 281.2 324 49.1
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 3.1e-73 279.6 322 50.3
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 4.5e-72 275.8 331 48.0
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 3.2e-70 269.6 333 45.0
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 2.3e-68 263.5 297 51.9
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 3.3e-67 259.6 332 45.5
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 1.3e-63 247.7 203 64.5
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 2.2e-63 246.9 336 43.8
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 2.2e-58 230.3 235 56.2
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 1.0e-55 221.5 185 58.4
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 8.2e-50 201.8 205 51.7
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 4.2e-46 189.5 158 62.7
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 3.3e-43 179.9 250 41.6
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 9.7e-43 178.3 178 53.4
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.8e-34 150.2 107 70.1
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 7.0e-33 145.6 107 68.2
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 4.4e-27 126.3 266 28.9
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.1e-25 121.7 89 66.3
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 2.5e-22 110.5 126 43.7
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 1.8e-17 94.4 82 63.4
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 3.2e-17 93.6 73 61.6
Cfa026856 Carpinus fangiana HOM05D002465 ORTHO05D121771 1.9e-06 57.8 327 26.0


User provided reference genes

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