Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G0260 Erigeron canadensis HOM05D006277 ORTHO05D007673 9.1e-163 577.0 329 100.0
HanXRQChr04g0117941 Helianthus annuus HOM05D006277 ORTHO05D007673 3.6e-74 282.7 211 78.7
Lsat_1_v5_gn_2_135460 Lactuca sativa HOM05D006277 ORTHO05D007673 6.3e-71 271.9 300 58.0
Sabra12G0000500 Salix brachista HOM05D006277 ORTHO05D007673 3.4e-61 239.6 227 62.1
GSVIVG01038680001 Vitis vinifera HOM05D006277 ORTHO05D007673 4.5e-61 239.2 252 57.9
Sabra12G0006800 Salix brachista HOM05D006277 ORTHO05D007673 7.7e-61 238.4 227 62.1
Dinv29192 Davidia involucrata HOM05D006277 ORTHO05D007673 1.7e-60 237.3 269 55.8
CANSAT21G1902 Cannabis sativa HOM05D006277 ORTHO05D007673 8.5e-60 235.0 359 46.8
Potri.012G004700 Populus trichocarpa HOM05D006277 ORTHO05D007673 4.2e-59 232.6 285 53.7
TWI59G0797 Tripterygium wilfordii HOM05D006277 ORTHO05D007673 2.1e-58 230.3 289 52.2
COL.COLO4_14399 Corchorus olitorius HOM05D006277 ORTHO05D007673 2.3e-57 226.9 210 60.5
MD01G1231400 Malus domestica HOM05D006277 ORTHO05D007673 1.1e-56 224.6 330 47.6
Manes.18G108300 Manihot esculenta HOM05D006277 ORTHO05D007673 3.3e-56 223.0 238 57.1
Duzib205G1288 Durio zibethinus HOM05D006277 ORTHO05D007673 7.4e-56 221.9 289 49.5
Lj1g0014471 Lotus japonicus HOM05D006277 ORTHO05D007673 1.3e-55 221.1 238 57.6
Rhsim03G0218400 Rhododendron simsii HOM05D006277 ORTHO05D007673 1.3e-55 221.1 301 49.5
Thecc.03G212000 Theobroma cacao HOM05D006277 ORTHO05D007673 2.2e-55 220.3 212 60.8
Glyma.06G139100 Glycine max HOM05D006277 ORTHO05D007673 3.7e-55 219.5 216 57.9
MSTRG.26953 Avicennia marina HOM05D006277 ORTHO05D007673 1.4e-54 217.6 283 50.9
Atru.chr12.2525 Acer truncatum HOM05D006277 ORTHO05D007673 2.4e-54 216.9 210 60.5
Atru.chr12.2501 Acer truncatum HOM05D006277 ORTHO05D007673 3.1e-54 216.5 206 61.2
AUR62005949 Chenopodium quinoa HOM05D006277 ORTHO05D007673 3.1e-54 216.5 233 59.2
MD07G1303400 Malus domestica HOM05D006277 ORTHO05D007673 4.1e-54 216.1 237 57.0
Phvul.009G040200 Phaseolus vulgaris HOM05D006277 ORTHO05D007673 4.1e-54 216.1 304 46.7
Ca_16838_v3 Cicer arietinum L. HOM05D006277 ORTHO05D007673 5.3e-54 215.7 238 54.6
vmacro06474 Vaccinium macrocarpon HOM05D006277 ORTHO05D007673 5.3e-54 215.7 285 50.9
PGSC0003DMG400000548 Solanum tuberosum HOM05D006277 ORTHO05D007673 7.0e-54 215.3 284 50.7
Migut.F00123 Erythranthe guttata HOM05D006277 ORTHO05D007673 1.2e-53 214.5 283 50.2
Gohir.A08G106400 Gossypium hirsutum HOM05D006277 ORTHO05D007673 1.2e-53 214.5 223 57.4
CAN.G303.58 Capsicum annuum HOM05D006277 ORTHO05D007673 1.6e-53 214.2 255 51.8
Glyma.04G225700 Glycine max HOM05D006277 ORTHO05D007673 2.0e-53 213.8 237 54.4
CSS0047728 Camellia sinensis var. sinensis HOM05D006277 ORTHO05D007673 2.6e-53 213.4 204 63.7
Gorai.004G126300 Gossypium raimondii HOM05D006277 ORTHO05D007673 2.6e-53 213.4 285 50.2
PSO384G3009 Papaver somniferum HOM05D006277 ORTHO05D007673 5.9e-53 212.2 302 48.0
Prupe.2G322100 Prunus persica HOM05D006277 ORTHO05D007673 7.7e-53 211.8 190 65.3
Psat6g243000 Pisum sativum HOM05D006277 ORTHO05D007673 1.0e-52 211.5 209 57.4
EL10Ac3g05132 Beta vulgaris HOM05D006277 ORTHO05D007673 1.3e-52 211.1 226 59.3
CiPaw.06G038300 Carya illinoinensis HOM05D006277 ORTHO05D007673 1.3e-52 211.1 262 53.1
PSO170G0956 Papaver somniferum HOM05D006277 ORTHO05D007673 1.7e-52 210.7 351 44.2
PSO063G0207 Papaver somniferum HOM05D006277 ORTHO05D007673 2.9e-52 209.9 339 43.7
SalBow4G0692 Salvia bowleyana HOM05D006277 ORTHO05D007673 3.8e-52 209.5 225 56.4
arahy.Tifrunner.gnm1.ann1.NYS2P6 Arachis hypogaea HOM05D006277 ORTHO05D007673 5.0e-52 209.1 288 47.6
arahy.Tifrunner.gnm1.ann1.VE49IY Arachis hypogaea HOM05D006277 ORTHO05D007673 6.5e-52 208.8 288 47.6
Lalb_Chr23g0272041 Lupinus albus HOM05D006277 ORTHO05D007673 6.5e-52 208.8 200 60.0
RcHm_v2.0_Chr1g0383301 Rosa chinensis HOM05D006277 ORTHO05D007673 6.5e-52 208.8 208 60.6
Nitab4.5_0007121g0020 Nicotiana tabacum HOM05D006277 ORTHO05D007673 8.5e-52 208.4 280 47.5
Solyc03g079950.4 Solanum lycopersicum HOM05D006277 ORTHO05D007673 1.9e-51 207.2 176 63.6
Nitab4.5_0000021g0190 Nicotiana tabacum HOM05D006277 ORTHO05D007673 3.2e-51 206.5 251 53.8
arahy.Tifrunner.gnm1.ann1.YJ5L14 Arachis hypogaea HOM05D006277 ORTHO05D007673 4.2e-51 206.1 288 47.2
Sc19g0000370 Simmondsia chinensis HOM05D006277 ORTHO05D007673 4.2e-51 206.1 301 47.5
VMungo1309G1324 Vigna mungo HOM05D006277 ORTHO05D007673 4.2e-51 206.1 224 55.4
QL09p006002 Quercus lobata HOM05D006277 ORTHO05D007673 5.5e-51 205.7 212 58.0
THA.LOC104803317 Tarenaya hassleriana HOM05D006277 ORTHO05D007673 7.2e-51 205.3 224 56.2
Medtr3g093330 Medicago truncatula HOM05D006277 ORTHO05D007673 2.1e-50 203.8 290 48.6
TPR.G35912 Trifolium pratense HOM05D006277 ORTHO05D007673 3.6e-50 203.0 241 53.5
Aa31LG11G3890 Aethionema arabicum HOM05D006277 ORTHO05D007673 4.7e-50 202.6 189 64.0
AUR62028116 Chenopodium quinoa HOM05D006277 ORTHO05D007673 4.7e-50 202.6 238 52.5
TAR626G1328 Trochodendron aralioides HOM05D006277 ORTHO05D007673 4.7e-50 202.6 335 43.3
Ciclev10005393m.g Citrus clementina HOM05D006277 ORTHO05D007673 1.8e-49 200.7 258 48.8
Sopen03g027470 Solanum pennellii HOM05D006277 ORTHO05D007673 1.8e-49 200.7 246 51.2
SGA_v2.0_scaffold18G08496 Striga asiatica HOM05D006277 ORTHO05D007673 2.3e-49 200.3 290 48.3
Cc02_g00600 Coffea canephora HOM05D006277 ORTHO05D007673 6.7e-49 198.7 284 50.4
HPP92_017116 Vanilla planifolia HOM05D006277 ORTHO05D007673 8.8e-49 198.4 332 43.4
HPP92_017121 Vanilla planifolia HOM05D006277 ORTHO05D007673 1.2e-48 198.0 282 45.7
FAN01G0327 Fragaria x ananassa HOM05D006277 ORTHO05D007673 1.5e-48 197.6 323 45.5
LjContig00312_ERROPOS870357g0003049 Lotus japonicus HOM05D006277 ORTHO05D007673 2.0e-48 197.2 238 55.5
BcaNung02006 Brassica carinata HOM05D006277 ORTHO05D007673 2.6e-48 196.8 214 58.9
AUR62030650 Chenopodium quinoa HOM05D006277 ORTHO05D007673 2.6e-48 196.8 327 46.8
Eucgr.K00479 Eucalyptus grandis HOM05D006277 ORTHO05D007673 2.6e-48 196.8 212 57.1
FvH4_7g33320 Fragaria vesca HOM05D006277 ORTHO05D007673 2.6e-48 196.8 287 49.1
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 9.7e-48 194.9 232 57.3
Carub.0006s2249 Capsella rubella HOM05D006277 ORTHO05D007673 9.7e-48 194.9 227 57.3
Thhalv10004336m.g Eutrema salsugineum HOM05D006277 ORTHO05D007673 2.8e-47 193.4 231 56.7
AT5G24630 Arabidopsis thaliana HOM05D006277 ORTHO05D007673 3.7e-47 193.0 189 62.4
Haze_00334 Corylus avellana HOM05D006277 ORTHO05D007673 4.8e-47 192.6 328 42.7
Sp2g22750 Schrenkiella parvula HOM05D006277 ORTHO05D007673 8.2e-47 191.8 216 60.6
FAN10G3443 Fragaria x ananassa HOM05D006277 ORTHO05D007673 1.4e-46 191.0 287 47.7
Os02g0147100 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 1.4e-46 191.0 296 41.2
Aqoxy7G02781 Aquilegia oxysepala HOM05D006277 ORTHO05D007673 1.8e-46 190.7 186 60.2
AL6G36240 Arabidopsis lyrata HOM05D006277 ORTHO05D007673 1.8e-46 190.7 187 62.0
FAN10G1913 Fragaria x ananassa HOM05D006277 ORTHO05D007673 1.8e-46 190.7 318 46.2
PGR142G2769 Punica granatum HOM05D006277 ORTHO05D007673 3.1e-46 189.9 229 53.3
Peaxi162Scf01026g00268 Petunia axillaris HOM05D006277 ORTHO05D007673 7.0e-46 188.7 247 50.2
Os02g0147700 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 9.1e-46 188.3 324 39.5
C07p43080 Brassica napus HOM05D006277 ORTHO05D007673 1.2e-45 188.0 226 55.8
Hund09753 Selenicereus undatus HOM05D006277 ORTHO05D007673 1.2e-45 188.0 279 44.4
Sed0010003 Sechium edule HOM05D006277 ORTHO05D007673 4.5e-45 186.0 206 52.4
BolC7t44835H Brassica oleracea HOM05D006277 ORTHO05D007673 5.9e-45 185.7 226 55.3
ClCG07G009750 Citrullus lanatus HOM05D006277 ORTHO05D007673 5.9e-45 185.7 231 51.1
Cpa.g.sc3.186 Carica papaya HOM05D006277 ORTHO05D007673 7.7e-45 185.3 291 42.6
CARHR188820 Cardamine hirsuta HOM05D006277 ORTHO05D007673 1.3e-44 184.5 210 57.1
A06p35430 Brassica napus HOM05D006277 ORTHO05D007673 1.7e-44 184.1 203 58.1
BraA06t26466Z Brassica rapa HOM05D006277 ORTHO05D007673 1.7e-44 184.1 203 58.1
arahy.Tifrunner.gnm1.ann1.T9XRV5 Arachis hypogaea HOM05D006277 ORTHO05D007673 3.8e-44 183.0 240 51.2
CDE02G3091 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 8.5e-44 181.8 342 43.0
SEGI_26440 Sequoiadendron giganteum HOM05D006277 ORTHO05D007673 8.5e-44 181.8 354 39.8
ATR0626G063 Amborella trichopoda HOM05D006277 ORTHO05D007673 1.5e-43 181.0 335 39.4
MELO3C023191.2 Cucumis melo HOM05D006277 ORTHO05D007673 2.1e-42 177.2 203 54.2
MBI16_g10337_MAGBIO Magnolia biondii HOM05D006277 ORTHO05D007673 2.1e-42 177.2 347 41.5
CsaV3_2G019700 Cucumis sativus L. HOM05D006277 ORTHO05D007673 8.0e-42 175.3 218 50.5
FAN03G1266 Fragaria x ananassa HOM05D006277 ORTHO05D007673 8.8e-41 171.8 242 45.0
Zm00001eb232230 Zea mays HOM05D006277 ORTHO05D007673 2.6e-40 170.2 299 39.5
DCAR_010558 Daucus carota HOM05D006277 ORTHO05D007673 3.4e-40 169.9 270 50.4
PSO384G0555 Papaver somniferum HOM05D006277 ORTHO05D007673 4.8e-39 166.0 158 60.8
Oeu010718.2 Olea europaea HOM05D006277 ORTHO05D007673 3.5e-37 159.8 263 43.0
Mapoly0143s0029 Marchantia polymorpha HOM05D006277 ORTHO05D007673 6.6e-36 155.6 122 63.1
BraA09t36286Z Brassica rapa HOM05D000010 ORTHO05D000063 2.8e-34 150.2 180 52.2
BolC9t53629H Brassica oleracea HOM05D003313 ORTHO05D004217 5.2e-33 146.0 190 53.7
BcaNung01248 Brassica carinata HOM05D006277 ORTHO05D007673 1.7e-31 141.0 411 33.3
Actinidia08720 Actinidia chinensis HOM05D006277 ORTHO05D007673 2.8e-31 140.2 269 40.9
Cfa016128 Carpinus fangiana HOM05D006277 ORTHO05D007673 1.4e-30 137.9 188 46.3
A09p06430 Brassica napus HOM05D000010 ORTHO05D000063 1.8e-30 137.5 202 49.0
AagrBONN_evm.TU.Sc2ySwM_362.1883 Anthoceros agrestis HOM05D006277 ORTHO05D007673 1.7e-28 131.0 191 45.0
Pp3c7_3940 Physcomitrium patens HOM05D006277 ORTHO05D007673 1.7e-28 131.0 257 37.7
CBR_g24064 Chara braunii HOM05D006277 ORTHO05D007673 2.3e-28 130.6 202 41.1
Gohir.D08G117800 Gossypium hirsutum HOM05D006277 ORTHO05D007673 2.3e-28 130.6 177 46.3
Pp3c11_21910 Physcomitrium patens HOM05D006277 ORTHO05D007673 1.5e-27 127.9 221 40.7
Nn7g37003 Nelumbo nucifera HOM05D006277 ORTHO05D007673 7.3e-27 125.6 239 38.9
C09p07160 Brassica napus HOM05D000010 ORTHO05D000063 1.4e-25 121.3 325 35.1
CBR_g39579 Chara braunii HOM05D000601 ORTHO05D007673 4.0e-25 119.8 110 52.7
arahy.Tifrunner.gnm1.ann1.Z5WHM0 Arachis hypogaea HOM05D006277 ORTHO05D007673 2.9e-23 113.6 235 38.3
CDE06G1557 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 3.2e-22 110.2 244 38.9
Potri.015G000701 Populus trichocarpa HOM05D006277 ORTHO05D007673 3.2e-22 110.2 94 58.5
CBR_g31160 Chara braunii HOM05D006277 ORTHO05D007673 6.0e-21 105.9 147 43.5
CiPaw.10G123600 Carya illinoinensis HOM05D006277 ORTHO05D007673 6.6e-12 75.9 59 69.5
Nn5g26949 Nelumbo nucifera HOM05D006277 ORTHO05D007673 3.3e-11 73.6 49 69.4
MCO04G384 Micromonas commoda HOM05D006277 ORTHO05D007673 1.4e-09 68.2 153 33.3


User provided reference genes

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