Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 4.8e-108 394.4 190 100.0
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 6.3e-100 367.5 192 92.2
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 4.1e-99 364.8 190 92.6
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.9e-84 315.5 187 75.9
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.4e-83 312.4 187 75.4
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 2.4e-83 312.4 187 75.4
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 5.0e-81 304.7 187 74.9
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 5.0e-81 304.7 188 73.4
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 1.1e-80 303.5 188 75.5
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 1.5e-80 303.1 188 75.5
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 4.3e-80 301.6 190 73.2
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 5.6e-80 301.2 182 75.3
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 1.6e-79 299.7 189 70.9
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 2.1e-79 299.3 189 70.9
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 2.8e-79 298.9 187 71.7
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 2.8e-79 298.9 187 71.1
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 3.6e-79 298.5 187 73.3
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 4.7e-79 298.1 187 71.1
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 4.7e-79 298.1 188 71.3
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 6.2e-79 297.7 188 73.9
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.4e-78 296.6 190 71.6
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 1.4e-78 296.6 185 74.6
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 1.4e-78 296.6 188 70.2
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 1.8e-78 296.2 184 73.4
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 2.3e-78 295.8 185 76.2
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 3.1e-78 295.4 189 73.0
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 4.0e-78 295.0 188 69.1
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 4.0e-78 295.0 188 70.7
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 4.0e-78 295.0 187 72.2
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 6.8e-78 294.3 187 73.3
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 6.8e-78 294.3 188 69.7
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 8.9e-78 293.9 184 71.7
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 8.9e-78 293.9 187 71.1
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.2e-77 293.5 188 72.9
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 1.2e-77 293.5 192 73.4
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 4.4e-77 291.6 187 70.6
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 4.4e-77 291.6 188 72.9
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 5.8e-77 291.2 187 70.6
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.7e-76 289.7 192 73.4
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 1.7e-76 289.7 187 70.1
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 3.7e-76 288.5 188 71.3
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 6.4e-76 287.7 186 71.5
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.4e-75 285.8 186 71.0
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.4e-75 285.8 186 71.0
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 2.4e-75 285.8 187 69.0
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 5.4e-75 284.6 188 68.1
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 5.4e-75 284.6 187 69.5
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 7.1e-75 284.3 186 68.8
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 1.2e-74 283.5 188 68.6
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 1.2e-74 283.5 186 69.9
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 1.2e-74 283.5 187 69.5
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 1.6e-74 283.1 192 67.7
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 3.5e-74 282.0 187 70.1
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 6.0e-74 281.2 188 67.6
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 7.8e-74 280.8 184 70.7
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 7.8e-74 280.8 185 69.2
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 1.3e-73 280.0 189 68.3
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 1.3e-73 280.0 189 68.3
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.3e-73 280.0 183 68.3
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 1.7e-73 279.6 186 69.9
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.7e-73 279.6 186 69.9
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 3.0e-73 278.9 187 69.0
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 5.1e-73 278.1 190 64.7
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 5.1e-73 278.1 186 69.9
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 5.1e-73 278.1 186 67.2
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 6.6e-73 277.7 192 65.1
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 8.6e-73 277.3 203 64.0
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 8.6e-73 277.3 184 68.5
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 1.1e-72 276.9 187 69.5
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 1.5e-72 276.6 187 69.0
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 1.5e-72 276.6 186 68.8
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 1.9e-72 276.2 187 68.4
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 4.3e-72 275.0 187 68.4
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 5.6e-72 274.6 191 64.9
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 1.6e-71 273.1 190 63.2
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 4.7e-71 271.6 190 65.8
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 4.7e-71 271.6 188 65.4
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 6.2e-71 271.2 191 64.4
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 8.1e-71 270.8 190 63.2
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 1.1e-70 270.4 188 67.0
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 1.4e-70 270.0 187 66.8
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 4.0e-70 268.5 187 66.3
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 5.2e-70 268.1 227 59.5
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 1.2e-69 266.9 187 65.8
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 1.2e-69 266.9 187 65.8
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 1.2e-69 266.9 187 65.8
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 1.2e-69 266.9 196 61.7
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 1.5e-69 266.5 187 65.8
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 2.2e-68 262.7 215 60.9
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 3.7e-68 261.9 188 65.4
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 5.4e-67 258.1 187 65.8
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 9.2e-67 257.3 185 63.8
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 3.0e-65 252.3 190 64.2
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 8.6e-65 250.8 186 61.3
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 9.6e-64 247.3 192 62.5
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 3.6e-63 245.4 188 63.8
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.4e-62 243.4 187 63.6
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 4.0e-62 241.9 186 57.5
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 8.9e-62 240.7 187 59.9
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 1.2e-61 240.4 185 58.9
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 3.4e-61 238.8 148 74.3
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 5.8e-61 238.0 186 57.0
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 4.9e-60 235.0 181 62.4
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 8.4e-60 234.2 184 62.0
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 3.2e-59 232.3 181 59.1
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 1.2e-58 230.3 187 59.4
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 1.6e-58 229.9 174 64.4
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 1.3e-57 226.9 191 53.9
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 2.3e-57 226.1 187 56.7
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 3.9e-57 225.3 183 59.6
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 8.7e-57 224.2 146 67.1
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.1e-56 223.8 187 57.8
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 1.9e-56 223.0 192 57.3
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 2.5e-56 222.6 191 55.0
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 4.3e-56 221.9 191 55.0
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 3.1e-54 215.7 179 61.5
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.7e-52 209.9 189 54.5
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 4.2e-51 205.3 135 68.1
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.2e-50 203.8 188 55.3
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 4.2e-35 152.1 111 59.5
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.3e-33 147.1 84 77.4
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 9.6e-32 141.0 79 79.7
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 3.8e-28 129.0 99 63.6
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 3.9e-25 119.0 109 48.6
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 6.1e-18 95.1 120 44.2
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 5.1e-17 92.0 87 54.0
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 2.6e-08 63.2 106 36.8
PRCOL_00002298 Prasinoderma coloniale HOM05D006185 ORTHO05D007572 7.4e-08 61.6 190 27.4


User provided reference genes

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