Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 9.5e-245 849.7 428 100.0
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 2.5e-205 718.8 407 87.2
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 2.4e-203 712.2 417 84.2
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 2.5e-168 595.9 402 72.6
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 1.3e-164 583.6 402 71.9
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 4.2e-160 568.5 401 70.6
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 1.2e-159 567.0 406 69.7
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 3.6e-159 565.5 403 68.5
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 6.1e-159 564.7 418 68.7
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 1.0e-158 563.9 423 68.1
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 1.4e-158 563.5 407 68.6
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 3.0e-158 562.4 435 68.0
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 3.9e-158 562.0 409 68.9
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 1.5e-157 560.1 406 68.0
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 1.7e-156 556.6 401 69.1
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 2.2e-156 556.2 403 68.7
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 2.8e-156 555.8 417 67.9
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 3.7e-156 555.4 402 68.2
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 1.4e-155 553.5 414 67.4
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 1.8e-155 553.1 401 68.3
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 5.3e-155 551.6 402 67.9
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 7.0e-155 551.2 419 65.2
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 9.1e-155 550.8 401 68.1
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 1.6e-154 550.1 402 68.2
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 2.0e-154 549.7 404 66.3
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 1.0e-153 547.4 401 67.6
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 1.0e-153 547.4 401 67.3
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 1.3e-153 547.0 401 67.1
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 2.9e-153 545.8 426 64.6
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 2.9e-153 545.8 401 67.1
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 3.8e-153 545.4 368 71.7
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 8.5e-153 544.3 419 66.3
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.1e-152 543.9 401 67.8
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 1.1e-152 543.9 405 66.7
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 1.5e-152 543.5 400 67.8
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.5e-152 543.5 401 67.6
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 1.9e-152 543.1 417 63.8
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 3.2e-152 542.3 418 65.6
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 4.2e-152 542.0 402 68.2
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 7.2e-152 541.2 402 68.2
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 1.6e-151 540.0 426 62.9
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 2.1e-151 539.7 409 66.0
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 2.1e-151 539.7 402 66.7
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 2.1e-151 539.7 402 67.2
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 2.7e-151 539.3 402 66.4
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 4.7e-151 538.5 404 66.1
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 8.0e-151 537.7 404 67.1
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 8.0e-151 537.7 404 67.1
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 1.0e-150 537.3 407 64.9
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 1.0e-150 537.3 406 66.0
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 1.4e-150 537.0 401 65.6
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 1.4e-150 537.0 408 64.2
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 3.0e-150 535.8 417 63.3
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 1.2e-149 533.9 479 58.0
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 1.5e-149 533.5 401 67.3
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 2.0e-149 533.1 405 66.9
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 3.3e-149 532.3 410 64.9
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 9.7e-149 530.8 421 64.4
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 1.3e-148 530.4 408 66.2
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 1.3e-148 530.4 398 66.1
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 1.7e-148 530.0 408 64.2
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 2.8e-148 529.3 408 64.0
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 1.1e-147 527.3 403 65.3
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 1.8e-147 526.6 404 65.1
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 1.8e-147 526.6 404 63.6
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 2.7e-146 522.7 401 64.6
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 3.5e-146 522.3 401 64.3
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 1.7e-145 520.0 431 62.9
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 5.5e-144 515.0 402 63.2
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 7.2e-144 514.6 402 63.7
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 9.4e-144 514.2 411 61.1
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 2.7e-143 512.7 422 62.3
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 6.1e-143 511.5 431 59.9
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 2.3e-142 509.6 408 64.2
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 1.5e-141 506.9 407 61.2
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 3.4e-141 505.8 413 60.8
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 4.4e-141 505.4 406 63.1
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 3.7e-140 502.3 401 61.8
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 7.0e-139 498.0 399 62.2
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 1.6e-138 496.9 399 61.9
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 7.7e-138 494.6 405 60.0
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 1.0e-137 494.2 402 60.9
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 1.0e-137 494.2 402 60.9
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.3e-137 493.8 434 58.1
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 1.2e-135 487.3 402 60.9
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 1.2e-135 487.3 399 60.2
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.1e-135 486.5 348 67.0
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 3.6e-135 485.7 399 59.9
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 1.2e-133 480.7 338 68.9
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 4.9e-132 475.3 341 67.7
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 8.3e-132 474.6 370 64.3
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 2.4e-131 473.0 322 70.8
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 5.9e-130 468.4 487 51.1
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 2.3e-129 466.5 311 71.7
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 3.9e-129 465.7 311 74.3
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 5.8e-125 451.8 416 55.8
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 6.4e-124 448.4 311 70.4
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 8.6e-121 438.0 420 51.0
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 1.6e-111 407.1 284 70.1
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 8.1e-111 404.8 311 64.0
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 4.4e-109 399.1 290 65.2
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 8.3e-108 394.8 281 68.0
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 5.1e-105 385.6 327 58.4
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 1.5e-101 374.0 281 66.5
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 3.5e-98 362.8 432 46.8
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 7.8e-98 361.7 402 51.2
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 8.7e-97 358.2 292 59.6
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 3.3e-96 356.3 416 47.4
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 3.2e-91 339.7 344 51.7
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 1.9e-88 330.5 324 55.9
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 2.1e-87 327.0 235 66.0
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.1e-83 314.7 281 54.8
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 8.7e-81 305.1 279 57.3
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 4.8e-79 299.3 220 69.1
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 4.2e-75 286.2 307 49.5
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 2.1e-74 283.9 321 48.9
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 1.5e-72 277.7 158 84.8
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 4.0e-70 269.6 263 51.3
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 3.7e-63 246.5 169 66.3
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.2e-55 220.7 225 49.8
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 6.3e-55 219.2 163 66.3
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 2.6e-48 197.2 144 68.1
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 9.1e-38 162.2 305 33.4
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 7.7e-37 159.1 143 63.6
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 9.4e-27 125.6 193 45.1
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 8.0e-26 122.5 107 53.3
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 2.0e-24 117.9 113 50.4
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 8.6e-20 102.4 214 34.1
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.4e-17 95.1 61 73.8
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 7.3e-11 72.8 57 59.6


User provided reference genes

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