Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 4.8e-138 494.6 266 100.0
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 2.8e-85 319.3 225 75.6
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 2.3e-84 316.2 224 75.0
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 6.0e-72 275.0 234 66.7
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 1.5e-67 260.4 240 62.1
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 9.9e-67 257.7 224 66.1
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 1.3e-66 257.3 233 62.7
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 1.3e-66 257.3 223 65.5
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 4.9e-66 255.4 238 61.8
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 1.4e-65 253.8 225 62.2
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 2.7e-64 249.6 224 62.5
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 4.6e-64 248.8 223 63.7
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 1.3e-63 247.3 223 61.4
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 3.0e-63 246.1 222 62.2
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 3.0e-63 246.1 223 62.3
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 5.1e-63 245.4 213 64.3
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 5.1e-63 245.4 236 60.2
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 6.6e-63 245.0 213 64.3
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 6.6e-63 245.0 213 61.0
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 8.7e-63 244.6 227 62.1
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 8.7e-63 244.6 212 64.6
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 1.1e-62 244.2 224 61.2
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 1.1e-62 244.2 234 58.5
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 1.1e-62 244.2 213 62.4
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 1.9e-62 243.4 223 62.3
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.9e-62 243.4 224 60.7
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 1.9e-62 243.4 224 61.6
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 2.5e-62 243.0 212 62.7
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 2.5e-62 243.0 212 63.7
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 2.5e-62 243.0 236 59.7
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 3.3e-62 242.7 222 63.5
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 5.6e-62 241.9 224 61.2
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 7.3e-62 241.5 212 63.7
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 9.6e-62 241.1 224 60.7
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 1.3e-61 240.7 236 58.9
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 1.3e-61 240.7 226 61.9
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 1.6e-61 240.4 222 62.2
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 2.8e-61 239.6 222 62.2
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 1.4e-60 237.3 237 58.6
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 1.4e-60 237.3 212 62.7
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 1.8e-60 236.9 218 60.1
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 1.8e-60 236.9 225 60.9
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 1.8e-60 236.9 223 61.4
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 2.4e-60 236.5 235 59.6
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 3.1e-60 236.1 224 60.7
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 4.0e-60 235.7 212 60.4
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 5.3e-60 235.3 224 60.7
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 1.2e-59 234.2 236 57.2
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 1.2e-59 234.2 235 57.9
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 2.0e-59 233.4 218 59.6
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 2.0e-59 233.4 238 58.8
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 2.0e-59 233.4 233 56.7
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 2.6e-59 233.0 238 58.8
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 9.9e-59 231.1 225 59.1
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 9.9e-59 231.1 213 59.6
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 1.3e-58 230.7 225 59.6
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 1.7e-58 230.3 234 57.3
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 1.7e-58 230.3 213 59.2
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 2.2e-58 229.9 227 59.0
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 2.2e-58 229.9 222 60.4
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 2.2e-58 229.9 233 57.5
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 2.2e-58 229.9 216 58.8
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 2.2e-58 229.9 218 58.7
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 2.9e-58 229.6 234 58.1
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 3.8e-58 229.2 212 60.8
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 4.9e-58 228.8 236 59.3
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 8.4e-58 228.0 212 59.9
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 1.4e-57 227.3 217 59.4
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 2.4e-57 226.5 223 57.4
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 4.2e-57 225.7 227 56.4
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 4.2e-57 225.7 234 57.3
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 2.1e-56 223.4 236 55.9
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 2.1e-56 223.4 226 58.0
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 4.6e-56 222.2 216 57.9
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 1.0e-55 221.1 216 56.0
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 8.7e-55 218.0 212 58.5
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 4.3e-54 215.7 227 53.3
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 5.6e-54 215.3 224 57.1
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 7.4e-54 214.9 223 55.2
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 2.1e-53 213.4 223 56.1
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 6.2e-53 211.8 222 54.1
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 8.1e-53 211.5 224 55.8
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 8.1e-53 211.5 224 55.8
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 1.1e-52 211.1 231 51.9
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 1.8e-52 210.3 228 51.8
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 1.8e-52 210.3 236 53.8
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 3.1e-52 209.5 228 53.5
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 5.3e-52 208.8 223 55.6
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 5.8e-51 205.3 226 52.2
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 7.6e-51 204.9 225 50.7
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 7.6e-51 204.9 177 61.6
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 3.8e-50 202.6 231 51.5
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 8.4e-50 201.4 220 50.9
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 3.2e-49 199.5 234 52.1
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 3.2e-49 199.5 233 51.9
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 5.5e-49 198.7 234 49.6
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 7.1e-49 198.4 242 48.8
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 1.2e-48 197.6 233 50.2
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 2.7e-48 196.4 237 51.1
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 6.7e-47 191.8 227 48.9
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 6.7e-47 191.8 227 48.9
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 6.7e-47 191.8 233 48.9
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 1.1e-44 184.5 234 48.3
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 5.3e-44 182.2 227 48.0
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 6.9e-44 181.8 226 47.8
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 6.9e-44 181.8 225 47.1
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 2.6e-43 179.9 226 47.3
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 2.6e-43 179.9 226 47.3
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 5.8e-43 178.7 227 47.6
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 6.5e-42 175.3 189 54.0
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 2.5e-41 173.3 233 45.1
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 4.2e-41 172.6 162 59.9
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 3.0e-39 166.4 117 72.6
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 1.5e-38 164.1 166 58.4
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 3.3e-30 136.3 118 60.2
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 1.4e-25 120.9 79 78.5
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 2.1e-24 117.1 122 57.4
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 3.0e-23 113.2 117 59.0
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 8.8e-23 111.7 214 35.0
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 9.1e-20 101.7 122 50.8
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 7.7e-19 98.6 76 69.7
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 1.3e-18 97.8 193 34.7
Lsat_1_v5_gn_3_52480 Lactuca sativa HOM05D005854 ORTHO05D007175 3.2e-17 93.2 96 61.5
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 4.7e-16 89.4 121 43.0
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 2.6e-14 83.6 77 54.5
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 3.3e-14 83.2 115 46.1
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 2.8e-13 80.1 150 33.3
FvH4_6g03240 Fragaria vesca HOM05D005854 ORTHO05D007175 8.5e-10 68.6 45 71.1


User provided reference genes

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