Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G3466 Erigeron canadensis HOM05D003356 ORTHO05D004362 1.4e-207 726.1 382 100.0
HanXRQChr15g0482461 Helianthus annuus HOM05D003356 ORTHO05D004362 6.6e-181 637.5 382 86.4
Lsat_1_v5_gn_7_18881 Lactuca sativa HOM05D003356 ORTHO05D004362 3.0e-173 612.1 383 84.6
Actinidia01887 Actinidia chinensis HOM05D003356 ORTHO05D004362 1.8e-141 506.5 382 68.6
CsaV3_4G033780 Cucumis sativus L. HOM05D003356 ORTHO05D004362 2.1e-139 499.6 381 68.2
ClCG11G018140 Citrullus lanatus HOM05D003356 ORTHO05D004362 2.8e-139 499.2 381 68.5
FAN16G2459 Fragaria x ananassa HOM05D003356 ORTHO05D004362 2.8e-139 499.2 381 67.2
RcHm_v2.0_Chr5g0034311 Rosa chinensis HOM05D003356 ORTHO05D004362 3.7e-139 498.8 381 67.7
FAN11G2849 Fragaria x ananassa HOM05D003356 ORTHO05D004362 4.8e-139 498.4 381 67.5
FvH4_3g20420 Fragaria vesca HOM05D003356 ORTHO05D004362 1.8e-138 496.5 381 67.2
FAN21G0641 Fragaria x ananassa HOM05D003356 ORTHO05D004362 4.0e-138 495.4 381 66.9
FAN25G0303 Fragaria x ananassa HOM05D003356 ORTHO05D004362 4.0e-138 495.4 381 66.9
Sed0005873 Sechium edule HOM05D003356 ORTHO05D004362 5.3e-138 495.0 381 67.7
Duzib213G0462 Durio zibethinus HOM05D003356 ORTHO05D004362 6.9e-138 494.6 382 68.1
Gohir.D11G296752 Gossypium hirsutum HOM05D003356 ORTHO05D004362 9.0e-138 494.2 382 67.3
Gorai.007G321200 Gossypium raimondii HOM05D003356 ORTHO05D004362 9.0e-138 494.2 382 67.3
Prupe.4G183900 Prunus persica HOM05D003356 ORTHO05D004362 9.0e-138 494.2 381 68.0
CANSAT56G0567 Cannabis sativa HOM05D003356 ORTHO05D004362 1.2e-137 493.8 381 67.2
Gohir.A11G283100 Gossypium hirsutum HOM05D003356 ORTHO05D004362 1.2e-137 493.8 382 67.3
Atru.chr2.2711 Acer truncatum HOM05D003356 ORTHO05D004362 3.4e-137 492.3 382 67.5
Manes.03G112000 Manihot esculenta HOM05D003356 ORTHO05D004362 4.5e-137 491.9 382 67.5
MD11G1246200 Malus domestica HOM05D003356 ORTHO05D004362 7.6e-137 491.1 381 67.7
Hma1.2p1_0881F.1_g232075 Hydrangea macrophylla HOM05D003356 ORTHO05D004362 1.0e-136 490.7 378 67.7
Potri.011G121100 Populus trichocarpa HOM05D003356 ORTHO05D004362 1.7e-136 490.0 382 66.8
QL08p020494 Quercus lobata HOM05D003356 ORTHO05D004362 1.7e-136 490.0 394 66.0
Eucgr.F01103 Eucalyptus grandis HOM05D003356 ORTHO05D004362 2.2e-136 489.6 381 65.9
Ciclev10007637m.g Citrus clementina HOM05D003356 ORTHO05D004362 3.8e-136 488.8 382 68.1
Thecc.07G080500 Theobroma cacao HOM05D003356 ORTHO05D004362 3.8e-136 488.8 382 67.5
Nitab4.5_0003688g0040 Nicotiana tabacum HOM05D003356 ORTHO05D004362 6.5e-136 488.0 382 66.8
Hma1.2p1_0148F.1_g066130 Hydrangea macrophylla HOM05D003356 ORTHO05D004362 1.1e-135 487.3 382 66.5
Medtr8g059125 Medicago truncatula HOM05D003356 ORTHO05D004362 1.4e-135 486.9 381 65.9
CiPaw.11G172300 Carya illinoinensis HOM05D003356 ORTHO05D004362 1.9e-135 486.5 381 66.7
GSVIVG01014366001 Vitis vinifera HOM05D003356 ORTHO05D004362 1.9e-135 486.5 382 66.8
Nitab4.5_0001551g0030 Nicotiana tabacum HOM05D003356 ORTHO05D004362 2.5e-135 486.1 382 66.5
Cfa020557 Carpinus fangiana HOM05D003356 ORTHO05D004362 3.2e-135 485.7 381 67.5
Phvul.011G150000 Phaseolus vulgaris HOM05D003356 ORTHO05D004362 5.5e-135 485.0 381 65.6
TAR624G0482 Trochodendron aralioides HOM05D003356 ORTHO05D004362 5.5e-135 485.0 381 66.4
VMungo1127G2063 Vigna mungo HOM05D003356 ORTHO05D004362 5.5e-135 485.0 381 65.1
DCAR_004079 Daucus carota HOM05D003356 ORTHO05D004362 1.2e-134 483.8 392 66.6
Nn1g06580 Nelumbo nucifera HOM05D003356 ORTHO05D004362 2.7e-134 482.6 378 66.1
Actinidia35254 Actinidia chinensis HOM05D003356 ORTHO05D004362 6.1e-134 481.5 382 66.2
CDE04G3674 Ceratophyllum demersum HOM05D003356 ORTHO05D004362 7.9e-134 481.1 376 66.0
PSO675G9024 Papaver somniferum HOM05D003356 ORTHO05D004362 7.9e-134 481.1 382 66.8
PGR083G2041 Punica granatum HOM05D003356 ORTHO05D004362 7.9e-134 481.1 381 65.4
vmacro11852 Vaccinium macrocarpon HOM05D003356 ORTHO05D004362 1.3e-133 480.3 382 66.5
Manes.15G086100 Manihot esculenta HOM05D003356 ORTHO05D004362 1.8e-133 479.9 382 65.2
PSO541G1226 Papaver somniferum HOM05D003356 ORTHO05D004362 1.8e-133 479.9 382 66.8
COL.COLO4_09421 Corchorus olitorius HOM05D003356 ORTHO05D004362 2.3e-133 479.6 396 64.9
Lalb_Chr01g0006491 Lupinus albus HOM05D003356 ORTHO05D004362 3.9e-133 478.8 381 66.1
TPR.G31511 Trifolium pratense HOM05D003356 ORTHO05D004362 3.9e-133 478.8 382 65.2
Lj3g0021569 Lotus japonicus HOM05D003356 ORTHO05D004362 5.1e-133 478.4 381 65.6
Psat5g244680 Pisum sativum HOM05D003356 ORTHO05D004362 6.7e-133 478.0 381 65.1
vmacro09540 Vaccinium macrocarpon HOM05D003356 ORTHO05D004362 6.7e-133 478.0 382 64.9
MSTRG.15221 Avicennia marina HOM05D003356 ORTHO05D004362 8.7e-133 477.6 382 65.7
Ca_20647_v3 Cicer arietinum L. HOM05D003356 ORTHO05D004362 8.7e-133 477.6 382 64.4
MD03G1225500 Malus domestica HOM05D003356 ORTHO05D004362 8.7e-133 477.6 362 67.1
CDE06G0677 Ceratophyllum demersum HOM05D003356 ORTHO05D004362 1.5e-132 476.9 376 66.0
Glyma.12G150800 Glycine max HOM05D003356 ORTHO05D004362 1.5e-132 476.9 365 66.8
Rhsim06G0197100 Rhododendron simsii HOM05D003356 ORTHO05D004362 1.5e-132 476.9 382 65.2
Sabra11G0105100 Salix brachista HOM05D003356 ORTHO05D004362 2.5e-132 476.1 385 65.2
Glyma.12G223200 Glycine max HOM05D003356 ORTHO05D004362 3.3e-132 475.7 381 66.7
HanXRQChr11g0328451 Helianthus annuus HOM05D003356 ORTHO05D004362 4.3e-132 475.3 382 64.9
arahy.Tifrunner.gnm1.ann1.1CAS5W Arachis hypogaea HOM05D003356 ORTHO05D004362 5.7e-132 474.9 376 64.9
arahy.Tifrunner.gnm1.ann1.4T1P38 Arachis hypogaea HOM05D003356 ORTHO05D004362 5.7e-132 474.9 376 64.9
HanXRQChr15g0494641 Helianthus annuus HOM05D003356 ORTHO05D004362 7.4e-132 474.6 382 64.7
Os04g0681400 Oryza sativa ssp. japonica HOM05D003356 ORTHO05D004362 7.4e-132 474.6 381 65.1
Sc03g0009930 Simmondsia chinensis HOM05D003356 ORTHO05D004362 7.4e-132 474.6 382 65.7
ATR0680G284 Amborella trichopoda HOM05D003356 ORTHO05D004362 1.6e-131 473.4 382 63.9
Haze_09456 Corylus avellana HOM05D003356 ORTHO05D004362 1.6e-131 473.4 381 66.7
Glyma.13G278300 Glycine max HOM05D003356 ORTHO05D004362 1.6e-131 473.4 381 66.1
Dinv04314 Davidia involucrata HOM05D003356 ORTHO05D004362 3.7e-131 472.2 382 66.5
Peaxi162Scf00069g01337 Petunia axillaris HOM05D003356 ORTHO05D004362 3.7e-131 472.2 401 63.1
MSTRG.6840 Avicennia marina HOM05D003356 ORTHO05D004362 8.2e-131 471.1 382 64.9
CSS0023849 Camellia sinensis var. sinensis HOM05D003356 ORTHO05D004362 1.1e-130 470.7 382 64.9
ECA236G2009 Erigeron canadensis HOM05D003356 ORTHO05D004362 1.1e-130 470.7 375 64.3
Migut.M00849 Erythranthe guttata HOM05D003356 ORTHO05D004362 1.4e-130 470.3 382 64.1
Os04g0681600 Oryza sativa ssp. japonica HOM05D003356 ORTHO05D004362 1.4e-130 470.3 381 64.8
CSS0014763 Camellia sinensis var. sinensis HOM05D003356 ORTHO05D004362 2.4e-130 469.5 382 65.7
Glyma.06G246600 Glycine max HOM05D003356 ORTHO05D004362 5.3e-130 468.4 361 66.8
MBI17_g30525_MAGBIO Magnolia biondii HOM05D003356 ORTHO05D004362 6.9e-130 468.0 361 65.7
SGA_v2.0_scaffold73G24287 Striga asiatica HOM05D003356 ORTHO05D004362 6.9e-130 468.0 383 65.3
Cc05_g12210 Coffea canephora HOM05D003356 ORTHO05D004362 9.0e-130 467.6 357 67.5
Rhsim04G0020100 Rhododendron simsii HOM05D003356 ORTHO05D004362 1.2e-129 467.2 382 64.9
arahy.Tifrunner.gnm1.ann1.YHI9TY Arachis hypogaea HOM05D003356 ORTHO05D004362 2.0e-129 466.5 402 64.2
SalBow2G3561 Salvia bowleyana HOM05D003356 ORTHO05D004362 2.0e-129 466.5 385 65.2
PGSC0003DMG400012423 Solanum tuberosum HOM05D003356 ORTHO05D004362 2.0e-129 466.5 382 64.7
SGA_v2.0_scaffold34G13734 Striga asiatica HOM05D003356 ORTHO05D004362 2.0e-129 466.5 383 64.8
EL10Ac4g08143 Beta vulgaris HOM05D003356 ORTHO05D004362 2.6e-129 466.1 390 63.8
Solyc07g063230.3 Solanum lycopersicum HOM05D003356 ORTHO05D004362 5.9e-129 464.9 382 64.1
A03p39290 Brassica napus HOM05D003356 ORTHO05D004362 7.7e-129 464.5 384 65.4
Oeu005419.1 Olea europaea HOM05D003356 ORTHO05D004362 7.7e-129 464.5 382 64.4
arahy.Tifrunner.gnm1.ann1.YA7R1N Arachis hypogaea HOM05D003356 ORTHO05D004362 1.0e-128 464.2 402 63.4
BraA03t13080Z Brassica rapa HOM05D003356 ORTHO05D004362 1.0e-128 464.2 376 65.7
Phvul.005G082401 Phaseolus vulgaris HOM05D003356 ORTHO05D004362 1.0e-128 464.2 378 65.6
Zm00001eb198690 Zea mays HOM05D003356 ORTHO05D004362 1.0e-128 464.2 381 62.7
BolC3t17043H Brassica oleracea HOM05D003356 ORTHO05D004362 1.3e-128 463.8 376 66.0
CAN.G162.68 Capsicum annuum HOM05D003356 ORTHO05D004362 1.3e-128 463.8 382 63.6
Zm00001eb065890 Zea mays HOM05D003356 ORTHO05D004362 1.3e-128 463.8 381 63.8
C05p51790 Brassica napus HOM05D003356 ORTHO05D004362 1.7e-128 463.4 378 65.6
Gohir.D01G052400 Gossypium hirsutum HOM05D003356 ORTHO05D004362 1.7e-128 463.4 382 63.9
AT3G15380 Arabidopsis thaliana HOM05D003356 ORTHO05D004362 3.8e-128 462.2 376 65.4
BcaC01g03876 Brassica carinata HOM05D003356 ORTHO05D004362 3.8e-128 462.2 381 64.8
C03p47660 Brassica napus HOM05D003356 ORTHO05D004362 3.8e-128 462.2 381 64.8
Cpa.g.sc80.47 Carica papaya HOM05D003356 ORTHO05D004362 3.8e-128 462.2 375 65.1
Sopen07g031420 Solanum pennellii HOM05D003356 ORTHO05D004362 3.8e-128 462.2 382 63.9
BolC5t33865H Brassica oleracea HOM05D003356 ORTHO05D004362 5.0e-128 461.8 378 65.3
A05p34020 Brassica napus HOM05D003356 ORTHO05D004362 6.5e-128 461.5 378 65.1
BraA05t22224Z Brassica rapa HOM05D003356 ORTHO05D004362 6.5e-128 461.5 378 65.1
Hund22933 Selenicereus undatus HOM05D003356 ORTHO05D004362 6.5e-128 461.5 426 59.6
Ah.04g165130 Amaranthus hybridus HOM05D003356 ORTHO05D004362 1.1e-127 460.7 382 64.7
AL3G27880 Arabidopsis lyrata HOM05D003356 ORTHO05D004362 1.1e-127 460.7 382 63.9
Gorai.002G072200 Gossypium raimondii HOM05D003356 ORTHO05D004362 1.4e-127 460.3 382 63.4
Gohir.A01G065000 Gossypium hirsutum HOM05D003356 ORTHO05D004362 1.9e-127 459.9 378 63.5
Sp3g13630 Schrenkiella parvula HOM05D003356 ORTHO05D004362 1.9e-127 459.9 376 64.6
Aqoxy1G02485 Aquilegia oxysepala HOM05D003356 ORTHO05D004362 3.2e-127 459.1 378 63.5
Carub.0003s1510 Capsella rubella HOM05D003356 ORTHO05D004362 5.5e-127 458.4 376 64.9
Lj1A846T66 Lonicera japonica HOM05D003356 ORTHO05D004362 9.4e-127 457.6 440 57.5
Lj3g0006216 Lotus japonicus HOM05D003356 ORTHO05D004362 1.2e-126 457.2 361 65.7
CARHR090420 Cardamine hirsuta HOM05D003356 ORTHO05D004362 2.7e-126 456.1 376 64.4
Thhalv10020171m.g Eutrema salsugineum HOM05D003356 ORTHO05D004362 3.6e-126 455.7 376 64.6
Lsat_1_v5_gn_7_105200 Lactuca sativa HOM05D003356 ORTHO05D004362 4.6e-126 455.3 375 63.2
Medtr2g079490 Medicago truncatula HOM05D003356 ORTHO05D004362 1.8e-125 453.4 378 63.2
unitig_37.g12574 Utricularia gibba HOM05D003356 ORTHO05D004362 1.8e-125 453.4 379 62.3
Ca_01833_v3 Cicer arietinum L. HOM05D003356 ORTHO05D004362 2.3e-125 453.0 357 65.3
Aqoxy4G00927 Aquilegia oxysepala HOM05D003356 ORTHO05D004362 3.9e-125 452.2 356 65.4
DCAR_019547 Daucus carota HOM05D003356 ORTHO05D004362 6.7e-125 451.4 361 65.4
Ah.06g183980 Amaranthus hybridus HOM05D003356 ORTHO05D004362 1.3e-123 447.2 382 62.8
CSS0019237 Camellia sinensis var. sinensis HOM05D003356 ORTHO05D004362 4.8e-123 445.3 382 63.9
Actinidia05623 Actinidia chinensis HOM05D003356 ORTHO05D004362 6.3e-123 444.9 382 61.8
HPP92_028116 Vanilla planifolia HOM05D003356 ORTHO05D004362 1.1e-122 444.1 370 59.2
THA.LOC104810480 Tarenaya hassleriana HOM05D003356 ORTHO05D004362 1.8e-122 443.4 378 60.8
Lalb_Chr19g0134291 Lupinus albus HOM05D003356 ORTHO05D004362 2.4e-122 443.0 355 62.8
AUR62034265 Chenopodium quinoa HOM05D003356 ORTHO05D004362 3.4e-121 439.1 352 63.4
MELO3C016707.2 Cucumis melo HOM05D003356 ORTHO05D004362 2.2e-120 436.4 381 61.9
Hund02220 Selenicereus undatus HOM05D003356 ORTHO05D004362 2.5e-119 433.0 468 51.7
Aa31LG8G2610 Aethionema arabicum HOM05D003356 ORTHO05D004362 2.1e-118 429.9 348 63.2
Dinv07551 Davidia involucrata HOM05D003356 ORTHO05D004362 5.3e-114 415.2 320 69.1
Lj8C157T5 Lonicera japonica HOM05D003356 ORTHO05D004362 1.3e-112 410.6 382 58.1
BcaB06g29569 Brassica carinata HOM05D003356 ORTHO05D004362 2.9e-112 409.5 334 65.6
Lalb_Chr25g0286481 Lupinus albus HOM05D003356 ORTHO05D004362 3.2e-111 406.0 327 64.8
SEGI_21847 Sequoiadendron giganteum HOM05D003356 ORTHO05D004362 8.0e-110 401.4 385 55.3
AUR62029372 Chenopodium quinoa HOM05D003356 ORTHO05D004362 6.7e-109 398.3 352 59.4
Psat4g135280 Pisum sativum HOM05D003356 ORTHO05D004362 2.0e-108 396.7 322 64.9
THA.LOC104818067 Tarenaya hassleriana HOM05D003356 ORTHO05D004362 5.3e-106 388.7 321 63.6
Pp3c9_13290 Physcomitrium patens HOM05D003356 ORTHO05D004362 2.9e-83 313.2 381 43.3
Mapoly0001s0233 Marchantia polymorpha HOM05D003356 ORTHO05D004362 4.9e-83 312.4 373 45.8
Dinv08306 Davidia involucrata HOM05D003356 ORTHO05D004362 8.9e-77 291.6 258 64.3
TAR626G0399 Trochodendron aralioides HOM05D003356 ORTHO05D004362 8.9e-77 291.6 251 61.8
Actinidia18761 Actinidia chinensis HOM05D003356 ORTHO05D004362 4.4e-76 289.3 256 61.7
AL3G27910 Arabidopsis lyrata HOM05D003356 ORTHO05D004362 4.0e-69 266.2 217 64.1
CBR_g34644 Chara braunii HOM05D003356 ORTHO05D004362 4.0e-69 266.2 373 40.8
CBR_g50441 Chara braunii HOM05D003356 ORTHO05D004362 5.8e-68 262.3 374 38.5
CBR_g34641 Chara braunii HOM05D003356 ORTHO05D004362 1.3e-67 261.2 373 38.9
HPP92_020871 Vanilla planifolia HOM05D003356 ORTHO05D004362 1.7e-67 260.8 213 58.7
HPP92_014741 Vanilla planifolia HOM05D003356 ORTHO05D004362 4.9e-67 259.2 272 50.7
Pp3c13_16790 Physcomitrium patens HOM05D003356 ORTHO05D004362 9.2e-66 255.0 381 39.4
BcaC05g28976 Brassica carinata HOM05D003356 ORTHO05D004362 2.1e-65 253.8 204 65.7
AL230U10050 Arabidopsis lyrata HOM05D003356 ORTHO05D004362 1.0e-48 198.4 217 52.1
PRCOL_00004496 Prasinoderma coloniale HOM05D003356 ORTHO05D004362 1.1e-47 194.9 368 32.1
TWI39G1274 Tripterygium wilfordii HOM05D003356 ORTHO05D004362 1.1e-47 194.9 128 77.3
MCO09G800 Micromonas commoda HOM05D003356 ORTHO05D004362 2.5e-47 193.7 377 34.0
TAR626G1858 Trochodendron aralioides HOM05D003356 ORTHO05D004362 6.2e-46 189.1 117 79.5
PRCOL_00001307 Prasinoderma coloniale HOM05D003356 ORTHO05D004362 1.4e-45 188.0 380 31.3
AagrBONN_evm.TU.Sc2ySwM_362.248 Anthoceros agrestis HOM05D003356 ORTHO05D004362 8.1e-38 162.2 366 29.0
MCO04G353 Micromonas commoda HOM05D003356 ORTHO05D004362 4.0e-37 159.8 372 29.0
Cre01.g021500 Chlamydomonas reinhardtii HOM05D003356 ORTHO05D004362 1.5e-36 157.9 437 27.9
Dinv08305 Davidia involucrata HOM05D003356 ORTHO05D004362 1.3e-30 138.3 100 67.0
Psat7g229040 Pisum sativum HOM05D003356 ORTHO05D004362 3.4e-28 130.2 108 61.1
AagrBONN_evm.TU.Sc2ySwM_228.601 Anthoceros agrestis HOM05D003356 ORTHO05D004362 2.2e-27 127.5 131 45.0
arahy.Tifrunner.gnm1.ann1.4J6IUL Arachis hypogaea HOM05D003356 ORTHO05D004362 1.2e-25 121.7 108 63.0
TPR.G17977 Trifolium pratense HOM05D003356 ORTHO05D030555 6.5e-19 99.4 177 37.3
A01p38720 Brassica napus HOM05D003356 ORTHO05D019431 1.0e-16 92.0 178 38.8
HPP92_014740 Vanilla planifolia HOM05D003356 ORTHO05D031488 1.5e-15 88.2 77 57.1
Sabra11G0105400 Salix brachista HOM05D003356 ORTHO05D030555 1.3e-14 85.1 72 55.6
arahy.Tifrunner.gnm1.ann1.H20E9K Arachis hypogaea HOM05D003356 ORTHO05D031488 8.2e-14 82.4 59 64.4
arahy.Tifrunner.gnm1.ann1.71RN23 Arachis hypogaea HOM05D003356 ORTHO05D014021 1.0e-11 75.5 96 43.8
BcaB04g20929 Brassica carinata HOM05D003356 ORTHO05D031488 1.1e-10 72.0 55 65.5
Rhsim04G0019900 Rhododendron simsii HOM05D055487 ORTHO05D338639 4.6e-09 66.6 61 57.4
arahy.Tifrunner.gnm1.ann1.93B9CG Arachis hypogaea HOM05D003356 ORTHO05D004362 3.0e-08 63.9 43 72.1
arahy.Tifrunner.gnm1.ann1.7XQU0B Arachis hypogaea HOM05D003356 ORTHO05D083362 6.7e-08 62.8 103 39.8
arahy.Tifrunner.gnm1.ann1.QJV3PU Arachis hypogaea HOM05D003356 ORTHO05D086117 1.1e-07 62.0 100 40.0
BolC1t04870H Brassica oleracea HOM05D003356 ORTHO05D019431 3.3e-07 60.5 50 56.0
BraA01t03913Z Brassica rapa HOM05D003356 ORTHO05D019431 6.3e-06 56.2 154 35.1


User provided reference genes

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