Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G3394 Erigeron canadensis HOM05D007200 ORTHO05D009030 2.4e-153 545.4 273 100.0
Lsat_1_v5_gn_9_87521 Lactuca sativa HOM05D007200 ORTHO05D009030 3.4e-123 445.3 280 80.4
HanXRQChr11g0339441 Helianthus annuus HOM05D007200 ORTHO05D009030 5.5e-121 438.0 276 81.2
Lj9C128T5 Lonicera japonica HOM05D007200 ORTHO05D009030 2.1e-104 382.9 256 73.8
GSVIVG01031113001 Vitis vinifera HOM05D007200 ORTHO05D009030 1.0e-103 380.6 273 71.1
TAR365G0906 Trochodendron aralioides HOM05D007200 ORTHO05D009030 8.8e-103 377.5 293 65.5
TAR365G0308 Trochodendron aralioides HOM05D007200 ORTHO05D009030 1.1e-102 377.1 293 65.5
VMungo0720G1786 Vigna mungo HOM05D007200 ORTHO05D009030 2.8e-101 372.5 237 77.2
Peaxi162Scf00071g00636 Petunia axillaris HOM05D007200 ORTHO05D009030 3.7e-101 372.1 271 69.7
Nitab4.5_0002420g0030 Nicotiana tabacum HOM05D007200 ORTHO05D009030 6.3e-101 371.3 274 68.2
Nn3g21404 Nelumbo nucifera HOM05D007200 ORTHO05D009030 8.2e-101 370.9 296 66.2
Eucgr.B01933 Eucalyptus grandis HOM05D007200 ORTHO05D009030 1.8e-100 369.8 273 68.5
FvH4_6g06280 Fragaria vesca HOM05D007200 ORTHO05D009030 2.4e-100 369.4 247 72.9
PGSC0003DMG400007427 Solanum tuberosum HOM05D007200 ORTHO05D009030 3.1e-100 369.0 269 67.7
Lj9C124T9 Lonicera japonica HOM05D007200 ORTHO05D009030 5.3e-100 368.2 280 67.5
RcHm_v2.0_Chr3g0455321 Rosa chinensis HOM05D007200 ORTHO05D009030 5.3e-100 368.2 245 73.1
Glyma.10G153100 Glycine max HOM05D007200 ORTHO05D009030 7.0e-100 367.9 237 75.5
FAN14G1797 Fragaria x ananassa HOM05D007200 ORTHO05D009030 9.1e-100 367.5 247 72.5
FAN09G0829 Fragaria x ananassa HOM05D007200 ORTHO05D009030 2.0e-99 366.3 247 72.1
Medtr1g083110 Medicago truncatula HOM05D007200 ORTHO05D009030 2.0e-99 366.3 259 71.0
Aqoxy5G00700 Aquilegia oxysepala HOM05D007200 ORTHO05D009030 2.6e-99 365.9 275 65.8
Manes.08G119500 Manihot esculenta HOM05D007200 ORTHO05D009030 2.6e-99 365.9 287 67.2
Ciclev10002020m.g Citrus clementina HOM05D007200 ORTHO05D009030 3.5e-99 365.5 282 66.0
Phvul.007G196200 Phaseolus vulgaris HOM05D007200 ORTHO05D009030 4.5e-99 365.2 237 75.1
TWI12G0470 Tripterygium wilfordii HOM05D007200 ORTHO05D009030 5.9e-99 364.8 274 65.7
CANSAT54G2021 Cannabis sativa HOM05D007200 ORTHO05D009030 5.0e-98 361.7 268 67.9
QL03p012758 Quercus lobata HOM05D007200 ORTHO05D009030 5.0e-98 361.7 283 66.1
Actinidia24645 Actinidia chinensis HOM05D007200 ORTHO05D009030 6.5e-98 361.3 288 65.3
Aa31LG5G15970 Aethionema arabicum HOM05D007200 ORTHO05D009030 4.2e-97 358.6 268 67.5
Lalb_Chr21g0310651 Lupinus albus HOM05D007200 ORTHO05D009030 9.4e-97 357.5 281 65.8
Rhsim05G0141700 Rhododendron simsii HOM05D007200 ORTHO05D009030 9.4e-97 357.5 244 73.4
MD12G1216700 Malus domestica HOM05D007200 ORTHO05D009030 1.2e-96 357.1 273 65.6
Thecc.05G310900 Theobroma cacao HOM05D007200 ORTHO05D009030 1.2e-96 357.1 285 66.0
Haze_04164 Corylus avellana HOM05D007200 ORTHO05D009030 3.6e-96 355.5 276 65.2
Psat6g149880 Pisum sativum HOM05D007200 ORTHO05D009030 3.6e-96 355.5 251 70.5
CAN.G321.37 Capsicum annuum HOM05D007200 ORTHO05D009030 6.1e-96 354.8 270 65.9
Solyc11g008480.2 Solanum lycopersicum HOM05D007200 ORTHO05D009030 6.1e-96 354.8 269 65.4
Cfa006611 Carpinus fangiana HOM05D007200 ORTHO05D009030 1.0e-95 354.0 275 65.8
Atru.chr12.1493 Acer truncatum HOM05D007200 ORTHO05D009030 1.4e-95 353.6 290 64.1
Duzib177G0869 Durio zibethinus HOM05D007200 ORTHO05D009030 1.8e-95 353.2 285 64.2
DCAR_001939 Daucus carota HOM05D007200 ORTHO05D009030 2.3e-95 352.8 286 65.0
Thhalv10021289m.g Eutrema salsugineum HOM05D007200 ORTHO05D009030 2.3e-95 352.8 263 66.5
Sopen11g004260 Solanum pennellii HOM05D007200 ORTHO05D009030 2.3e-95 352.8 266 65.8
Carub.0003s0469 Capsella rubella HOM05D007200 ORTHO05D009030 3.0e-95 352.4 264 66.7
BolC5t34842H Brassica oleracea HOM05D007200 ORTHO05D000438 5.2e-95 351.7 260 68.1
AUR62005175 Chenopodium quinoa HOM05D007200 ORTHO05D009030 5.2e-95 351.7 272 66.5
PGR083G0889 Punica granatum HOM05D007200 ORTHO05D009030 5.2e-95 351.7 241 70.1
Sabra05G0032400 Salix brachista HOM05D007200 ORTHO05D009030 6.7e-95 351.3 287 65.2
TPR.G6036 Trifolium pratense HOM05D007200 ORTHO05D009030 8.8e-95 350.9 251 69.3
AUR62000793 Chenopodium quinoa HOM05D007200 ORTHO05D009030 1.2e-94 350.5 273 66.7
BcaC05g30124 Brassica carinata HOM05D007200 ORTHO05D009030 2.0e-94 349.7 263 66.9
BcaC05g30148 Brassica carinata HOM05D007200 ORTHO05D009030 2.0e-94 349.7 268 66.0
CSS0011307 Camellia sinensis var. sinensis HOM05D007200 ORTHO05D009030 2.0e-94 349.7 286 64.3
Migut.O00553 Erythranthe guttata HOM05D007200 ORTHO05D009030 1.3e-93 347.1 281 64.4
Prupe.6G323000 Prunus persica HOM05D007200 ORTHO05D009030 1.3e-93 347.1 247 69.6
CARHR079750 Cardamine hirsuta HOM05D007200 ORTHO05D009030 2.2e-93 346.3 268 64.9
AL3G15960 Arabidopsis lyrata HOM05D007200 ORTHO05D009030 2.8e-93 345.9 265 66.4
THA.LOC104818708 Tarenaya hassleriana HOM05D007200 ORTHO05D009030 2.8e-93 345.9 267 66.3
BraA05t23030Z Brassica rapa HOM05D007200 ORTHO05D009030 4.8e-93 345.1 260 66.9
Lj5g0005198 Lotus japonicus HOM05D007200 ORTHO05D009030 4.8e-93 345.1 282 66.0
Migut.N01991 Erythranthe guttata HOM05D007200 ORTHO05D009030 8.3e-93 344.4 281 64.1
Gohir.A11G266300 Gossypium hirsutum HOM05D007200 ORTHO05D009030 1.4e-92 343.6 272 66.5
Gohir.D11G276600 Gossypium hirsutum HOM05D007200 ORTHO05D009030 1.4e-92 343.6 272 66.5
Sp3g04270 Schrenkiella parvula HOM05D007200 ORTHO05D009030 1.4e-92 343.6 263 66.9
AT3G05410 Arabidopsis thaliana HOM05D007200 ORTHO05D009030 1.8e-92 343.2 249 67.9
Sed0020284 Sechium edule HOM05D007200 ORTHO05D009030 4.1e-92 342.0 277 63.9
Gorai.007G298700 Gossypium raimondii HOM05D007200 ORTHO05D009030 7.0e-92 341.3 272 66.2
Nitab4.5_0009303g0010 Nicotiana tabacum HOM05D007200 ORTHO05D009030 1.2e-91 340.5 274 65.7
Cc02_g31060 Coffea canephora HOM05D007200 ORTHO05D009030 1.6e-91 340.1 243 71.6
CiPaw.07G020000 Carya illinoinensis HOM05D007200 ORTHO05D009030 3.5e-91 339.0 242 69.4
COL.COLO4_10491 Corchorus olitorius HOM05D007200 ORTHO05D009030 7.7e-91 337.8 244 70.9
CsaV3_2G006520 Cucumis sativus L. HOM05D007200 ORTHO05D009030 2.9e-90 335.9 272 64.7
FAN02G4393 Fragaria x ananassa HOM05D007200 ORTHO05D009030 1.1e-89 334.0 226 70.8
FAN05G3823 Fragaria x ananassa HOM05D000179 ORTHO05D009030 3.2e-89 332.4 225 72.4
Cpa.g.sc48.76 Carica papaya HOM05D007200 ORTHO05D009030 4.2e-89 332.0 268 63.1
arahy.Tifrunner.gnm1.ann1.PH9A9F Arachis hypogaea HOM05D007200 ORTHO05D009030 7.2e-89 331.3 240 69.2
arahy.Tifrunner.gnm1.ann1.H2XQXC Arachis hypogaea HOM05D007200 ORTHO05D009030 4.7e-88 328.6 240 68.8
EL10Ac4g09392 Beta vulgaris HOM05D007200 ORTHO05D009030 2.3e-87 326.2 288 59.7
MELO3C004233.2 Cucumis melo HOM05D007200 ORTHO05D009030 1.7e-85 320.1 277 61.4
MBI19_g12813_MAGBIO Magnolia biondii HOM05D007200 ORTHO05D009030 6.3e-85 318.2 218 73.4
PSO210G0998 Papaver somniferum HOM05D007200 ORTHO05D009030 3.1e-84 315.8 241 64.3
Ah.04g160430 Amaranthus hybridus HOM05D007200 ORTHO05D009030 7.7e-83 311.2 273 59.7
CDE02G3507 Ceratophyllum demersum HOM05D007200 ORTHO05D009030 5.0e-82 308.5 247 63.6
vmacro19623 Vaccinium macrocarpon HOM05D007200 ORTHO05D009030 5.0e-82 308.5 264 63.3
SGA_v2.0_scaffold98G29315 Striga asiatica HOM05D007200 ORTHO05D009030 8.6e-82 307.8 261 60.2
PSO832G2855 Papaver somniferum HOM05D007200 ORTHO05D009030 1.5e-81 307.0 241 64.3
BcaC05g30126 Brassica carinata HOM05D007200 ORTHO05D009030 2.5e-81 306.2 263 61.2
CANSAT54G2778 Cannabis sativa HOM05D007200 ORTHO05D009030 4.2e-81 305.4 210 70.5
unitig_746.g26859 Utricularia gibba HOM05D004477 ORTHO05D005615 4.2e-81 305.4 232 64.2
MSTRG.27987 Avicennia marina HOM05D007200 ORTHO05D009030 2.1e-80 303.1 266 59.4
Zm00001eb142170 Zea mays HOM05D007200 ORTHO05D009030 8.0e-80 301.2 243 60.9
ATR0706G032 Amborella trichopoda HOM05D007200 ORTHO05D009030 5.2e-79 298.5 240 65.4
ClCG02G015570 Citrullus lanatus HOM05D007200 ORTHO05D009030 1.8e-76 290.0 270 58.1
HPP92_006928 Vanilla planifolia HOM05D000065 ORTHO05D001606 4.0e-71 272.3 227 60.4
Potri.005G027100 Populus trichocarpa HOM05D007200 ORTHO05D009030 9.8e-70 267.7 227 65.6
SMO140G0101 Selaginella moellendorffii HOM05D007200 ORTHO05D009030 2.9e-61 239.6 237 52.3
Pp3c2_22000 Physcomitrium patens HOM05D007200 ORTHO05D009030 5.4e-60 235.3 238 51.3
AagrBONN_evm.TU.Sc2ySwM_228.2760 Anthoceros agrestis HOM05D007200 ORTHO05D009030 1.3e-58 230.7 234 48.7
Os01g0934400 Oryza sativa ssp. japonica HOM05D007200 ORTHO05D009030 6.6e-58 228.4 178 62.9
Mapoly0092s0016 Marchantia polymorpha HOM05D007200 ORTHO05D009030 1.5e-57 227.3 234 49.1
Hund07085 Selenicereus undatus HOM05D007200 ORTHO05D009030 3.9e-50 202.6 184 58.7
Sc16g0008540 Simmondsia chinensis HOM05D007200 ORTHO05D009030 3.1e-47 193.0 176 58.0
CBR_g32304 Chara braunii HOM05D007200 ORTHO05D009030 4.9e-45 185.7 266 39.1
SGA_v2.0_scaffold95G28806 Striga asiatica HOM05D007200 ORTHO05D009030 7.8e-43 178.3 160 59.4
Cre09.g389578 Chlamydomonas reinhardtii HOM05D007200 ORTHO05D009030 1.5e-41 174.1 281 39.1
AUR62004827 Chenopodium quinoa HOM05D007200 ORTHO05D009030 2.5e-41 173.3 166 59.0
PRCOL_00003141 Prasinoderma coloniale HOM05D007200 ORTHO05D009030 2.6e-38 163.3 255 41.6
MCO07G015 Micromonas commoda HOM05D007200 ORTHO05D009030 3.8e-37 159.5 249 36.9
Oeu012109.1 Olea europaea HOM05D007200 ORTHO05D009030 3.0e-34 149.8 102 67.6
Actinidia19786 Actinidia chinensis HOM05D007200 ORTHO05D009030 1.4e-31 141.0 107 62.6
C05p61820 Brassica napus HOM05D000205 ORTHO05D000438 1.5e-25 120.9 161 48.4
MD04G1202900 Malus domestica HOM05D007200 ORTHO05D009030 1.8e-23 114.0 120 55.8
Os01g0934350 Oryza sativa ssp. japonica HOM05D007200 ORTHO05D009030 7.6e-14 82.0 64 57.8
AUR62032114 Chenopodium quinoa HOM05D002933 ORTHO05D007742 8.7e-10 68.6 226 24.3
AUR62039657 Chenopodium quinoa HOM05D002933 ORTHO05D007742 8.7e-10 68.6 224 24.1
Migut.B00505 Erythranthe guttata HOM05D002933 ORTHO05D007742 1.9e-09 67.4 249 24.9
CAN.G1228.6 Capsicum annuum HOM05D002933 ORTHO05D007742 1.3e-08 64.7 113 32.7
BcaC02g09745 Brassica carinata HOM05D002933 ORTHO05D007742 2.8e-08 63.5 118 32.2
BolC4t25275H Brassica oleracea HOM05D002933 ORTHO05D007742 2.8e-08 63.5 118 32.2
A04p04610 Brassica napus HOM05D002933 ORTHO05D007742 4.8e-08 62.8 118 32.2
BraA04t16171Z Brassica rapa HOM05D002933 ORTHO05D007742 4.8e-08 62.8 118 32.2
Oeu057202.1 Olea europaea HOM05D002933 ORTHO05D007742 6.3e-08 62.4 113 30.1
Hund02566 Selenicereus undatus HOM05D002933 ORTHO05D007742 6.3e-08 62.4 113 30.1
BcaB02g08429 Brassica carinata HOM05D002933 ORTHO05D007742 8.2e-08 62.0 118 31.4
Carub.0005s2198 Capsella rubella HOM05D002933 ORTHO05D007742 8.2e-08 62.0 118 30.5
Thhalv10010685m.g Eutrema salsugineum HOM05D002933 ORTHO05D007742 1.4e-07 61.2 118 30.5
EL10Ac5g11164 Beta vulgaris HOM05D002933 ORTHO05D007742 1.8e-07 60.8 113 29.2
Solyc03g114930.3 Solanum lycopersicum HOM05D002933 ORTHO05D007742 1.8e-07 60.8 99 32.3
Sopen03g034010 Solanum pennellii HOM05D002933 ORTHO05D007742 1.8e-07 60.8 99 32.3
PGSC0003DMG400024531 Solanum tuberosum HOM05D002933 ORTHO05D007742 2.4e-07 60.5 99 31.3
Ah.11g047550 Amaranthus hybridus HOM05D006809 ORTHO05D008609 3.1e-07 60.1 234 23.1


User provided reference genes

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