Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G2848 Erigeron canadensis HOM05D005507 ORTHO05D188348 1.1e-262 909.4 463 100.0
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 2.2e-45 187.6 122 82.8
ECA236G2469 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-44 185.3 177 53.7
ECA247G1102 Erigeron canadensis HOM05D003337 ORTHO05D003808 5.3e-15 86.7 54 66.7
ECA247G2722 Erigeron canadensis HOM05D006708 ORTHO05D007178 4.5e-14 83.6 99 53.5
ECA232G2349 Erigeron canadensis HOM05D006439 ORTHO05D008321 6.4e-13 79.7 144 36.8
ECA233G5482 Erigeron canadensis HOM05D006708 ORTHO05D008321 1.3e-10 72.0 103 41.7
ECA232G3517 Erigeron canadensis HOM05D006708 ORTHO05D007178 1.5e-09 68.6 217 30.4
Manes.08G080700 Manihot esculenta HOM05D005507 ORTHO05D007316 1.9e-09 68.2 79 50.6
ECA236G2467 Erigeron canadensis HOM05D005507 ORTHO05D007316 2.8e-08 64.3 38 78.9
ECA238G2984 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.8e-08 64.3 89 42.7
Glyma.18G153300 Glycine max HOM05D005507 ORTHO05D007316 2.8e-08 64.3 125 39.2
Phvul.010G010050 Phaseolus vulgaris HOM05D005507 ORTHO05D007316 2.8e-08 64.3 149 34.9
RcHm_v2.0_Chr3g0466451 Rosa chinensis HOM05D005507 ORTHO05D007316 2.8e-08 64.3 36 77.8
Aqoxy2G02218 Aquilegia oxysepala HOM05D005507 ORTHO05D007316 4.8e-08 63.5 66 53.0
Cc06_g02560 Coffea canephora HOM05D005507 ORTHO05D007316 6.2e-08 63.2 38 76.3
Dinv37165 Davidia involucrata HOM05D005507 ORTHO05D007316 6.2e-08 63.2 38 76.3
Lj2A93G83 Lonicera japonica HOM05D005507 ORTHO05D007316 6.2e-08 63.2 38 76.3
Nn2g11133 Nelumbo nucifera HOM05D005507 ORTHO05D007316 6.2e-08 63.2 38 76.3
Oeu024341.2 Olea europaea HOM05D005507 ORTHO05D007316 6.2e-08 63.2 38 76.3
COL.COLO4_14788 Corchorus olitorius HOM05D005507 ORTHO05D007316 8.1e-08 62.8 40 77.5
CAN.G499.3 Capsicum annuum HOM05D005507 ORTHO05D007316 1.1e-07 62.4 131 34.4
HanXRQChr04g0125471 Helianthus annuus HOM05D005507 ORTHO05D007316 1.1e-07 62.4 38 76.3
Potri.006G086200 Populus trichocarpa HOM05D005507 ORTHO05D007316 1.1e-07 62.4 125 36.0
TPR.G5632 Trifolium pratense HOM05D005507 ORTHO05D007316 1.1e-07 62.4 123 37.4
TAR623G0024 Trochodendron aralioides HOM05D005507 ORTHO05D007316 1.1e-07 62.4 66 51.5
TAR633G0577 Trochodendron aralioides HOM05D005507 ORTHO05D007316 1.4e-07 62.0 46 69.6
Cpa.g.sc188.6 Carica papaya HOM05D005507 ORTHO05D007316 1.8e-07 61.6 36 77.8
Gohir.A09G155500 Gossypium hirsutum HOM05D005507 ORTHO05D007316 1.8e-07 61.6 154 32.5
Lj3C966G5 Lonicera japonica HOM05D005507 ORTHO05D007316 1.8e-07 61.6 36 77.8
Actinidia11260 Actinidia chinensis HOM05D005507 ORTHO05D007316 2.4e-07 61.2 67 50.7
ATR0559G008 Amborella trichopoda HOM05D005507 ORTHO05D007316 2.4e-07 61.2 52 59.6
AL6G11510 Arabidopsis lyrata HOM05D005507 ORTHO05D007316 2.4e-07 61.2 36 75.0
AT5G02250 Arabidopsis thaliana HOM05D005507 ORTHO05D007316 2.4e-07 61.2 36 75.0
arahy.Tifrunner.gnm1.ann1.CQ4D9K Arachis hypogaea HOM05D005507 ORTHO05D007316 2.4e-07 61.2 39 79.5
Carub.0006s0109 Capsella rubella HOM05D005507 ORTHO05D007316 2.4e-07 61.2 36 75.0
COL.COLO4_18270 Corchorus olitorius HOM05D005507 ORTHO05D007316 2.4e-07 61.2 40 75.0
CsaV3_4G025060 Cucumis sativus L. HOM05D005507 ORTHO05D007316 2.4e-07 61.2 117 37.6
DCAR_028747 Daucus carota HOM05D005507 ORTHO05D007316 2.4e-07 61.2 38 73.7
Thhalv10012718m.g Eutrema salsugineum HOM05D005507 ORTHO05D007316 2.4e-07 61.2 36 75.0
FAN02G3281 Fragaria x ananassa HOM05D005507 ORTHO05D007316 2.4e-07 61.2 36 75.0
FAN09G0180 Fragaria x ananassa HOM05D005507 ORTHO05D007316 2.4e-07 61.2 36 75.0
Lalb_Chr07g0193881 Lupinus albus HOM05D005507 ORTHO05D007316 2.4e-07 61.2 122 39.3
Os01g0841800 Oryza sativa ssp. japonica HOM05D005507 ORTHO05D007316 2.4e-07 61.2 55 56.4
Rhsim05G0193600 Rhododendron simsii HOM05D005507 ORTHO05D007316 2.4e-07 61.2 38 73.7
SalBow3G2672 Salvia bowleyana HOM05D005507 ORTHO05D007316 2.4e-07 61.2 36 75.0
vmacro20162 Vaccinium macrocarpon HOM05D005507 ORTHO05D007316 2.4e-07 61.2 38 73.7
CSS0025531 Camellia sinensis var. sinensis HOM05D005507 ORTHO05D007316 3.1e-07 60.8 42 73.8
CDE04G1833 Ceratophyllum demersum HOM05D005507 ORTHO05D007316 3.1e-07 60.8 66 51.5
CDE07G0172 Ceratophyllum demersum HOM05D005507 ORTHO05D007316 3.1e-07 60.8 52 59.6
FvH4_6g13600 Fragaria vesca HOM05D005507 ORTHO05D007316 3.1e-07 60.8 70 47.1
Lalb_Chr12g0209571 Lupinus albus HOM05D005507 ORTHO05D007316 4.0e-07 60.5 125 35.2
Psat7g235360 Pisum sativum HOM05D005507 ORTHO05D007316 4.0e-07 60.5 78 47.4
Sp6g40200 Schrenkiella parvula HOM05D005507 ORTHO05D007316 4.0e-07 60.5 36 72.2
Sc07g0007070 Simmondsia chinensis HOM05D005507 ORTHO05D007316 4.0e-07 60.5 36 75.0
Sopen09g005610 Solanum pennellii HOM05D005507 ORTHO05D007316 4.0e-07 60.5 114 34.2
A10p33370 Brassica napus HOM05D005507 ORTHO05D007316 5.3e-07 60.1 80 46.2
BraA10t45368Z Brassica rapa HOM05D005507 ORTHO05D007316 5.3e-07 60.1 80 46.2
Medtr4g021750 Medicago truncatula HOM05D005507 ORTHO05D007316 5.3e-07 60.1 124 35.5
unitig_578.g15691 Utricularia gibba HOM05D005507 ORTHO05D007316 5.3e-07 60.1 36 75.0
Aa31LG1G22500 Aethionema arabicum HOM05D005507 ORTHO05D007316 6.9e-07 59.7 36 72.2
AUR62025794 Chenopodium quinoa HOM05D005507 ORTHO05D007316 6.9e-07 59.7 36 75.0
AUR62038110 Chenopodium quinoa HOM05D005507 ORTHO05D007316 6.9e-07 59.7 36 75.0
Ca_19991_v3 Cicer arietinum L. HOM05D005507 ORTHO05D007316 6.9e-07 59.7 116 37.9
Migut.J00324 Erythranthe guttata HOM05D005507 ORTHO05D007316 6.9e-07 59.7 101 40.6
Hma1.2p1_0936F.1_g238760 Hydrangea macrophylla HOM05D005507 ORTHO05D007316 6.9e-07 59.7 77 41.6
Hma1.2p1_0936F.1_g238770 Hydrangea macrophylla HOM05D005507 ORTHO05D007316 6.9e-07 59.7 36 72.2
Peaxi162Scf00165g01015 Petunia axillaris HOM05D005507 ORTHO05D007316 6.9e-07 59.7 127 33.9
Zm00001eb148300 Zea mays HOM05D005507 ORTHO05D007316 6.9e-07 59.7 38 73.7
CARHR211120 Cardamine hirsuta HOM05D005507 ORTHO05D007316 9.0e-07 59.3 36 72.2
ECA248G2923 Erigeron canadensis HOM05D006201 ORTHO05D007178 9.0e-07 59.3 73 46.6
Gohir.D09G151000 Gossypium hirsutum HOM05D005507 ORTHO05D007316 9.0e-07 59.3 125 36.0
Gorai.006G172300 Gossypium raimondii HOM05D005507 ORTHO05D007316 9.0e-07 59.3 125 36.0
Psat6g176160 Pisum sativum HOM05D005507 ORTHO05D007316 9.0e-07 59.3 78 47.4
PGSC0003DMG400008832 Solanum tuberosum HOM05D005507 ORTHO05D007316 9.0e-07 59.3 114 34.2
THA.LOC104816267 Tarenaya hassleriana HOM05D005507 ORTHO05D007316 9.0e-07 59.3 65 47.7
Thecc.05G038400 Theobroma cacao HOM05D005507 ORTHO05D007316 9.0e-07 59.3 64 50.0
Ah.13g075900 Amaranthus hybridus HOM05D005507 ORTHO05D007316 1.2e-06 58.9 79 41.8
CANSAT35G1404 Cannabis sativa HOM05D005507 ORTHO05D007316 1.2e-06 58.9 127 36.2
ClCG04G008130 Citrullus lanatus HOM05D005507 ORTHO05D007316 1.2e-06 58.9 70 47.1
MELO3C003135.2 Cucumis melo HOM05D005507 ORTHO05D007316 1.2e-06 58.9 150 32.7
Lsat_1_v5_gn_8_85360 Lactuca sativa HOM05D005507 ORTHO05D007316 1.2e-06 58.9 38 73.7
Prupe.6G256600 Prunus persica HOM05D005507 ORTHO05D007316 1.2e-06 58.9 78 43.6
GSVIVG01034161001 Vitis vinifera HOM05D005507 ORTHO05D007316 1.2e-06 58.9 72 47.2
Cfa017367 Carpinus fangiana HOM05D005507 ORTHO05D007316 1.5e-06 58.5 35 74.3
CiPaw.09G193400 Carya illinoinensis HOM05D005507 ORTHO05D007316 1.5e-06 58.5 125 34.4
Haze_20804 Corylus avellana HOM05D005507 ORTHO05D007316 1.5e-06 58.5 35 74.3
Sabra06G0065800 Salix brachista HOM05D005507 ORTHO05D007316 1.5e-06 58.5 125 35.2
HPP92_018140 Vanilla planifolia HOM05D005507 ORTHO05D007316 1.5e-06 58.5 38 71.1
C09p74280 Brassica napus HOM05D005507 ORTHO05D007316 2.0e-06 58.2 127 35.4
BolC9t60161H Brassica oleracea HOM05D005507 ORTHO05D007316 2.0e-06 58.2 127 35.4
arahy.Tifrunner.gnm1.ann1.128L9Z Arachis hypogaea HOM05D005507 ORTHO05D007316 2.6e-06 57.8 113 39.8
MSTRG.19080 Avicennia marina HOM05D005507 ORTHO05D007316 2.6e-06 57.8 36 72.2
Ciclev10011102m.g Citrus clementina HOM05D005507 ORTHO05D007316 2.6e-06 57.8 124 36.3
Eucgr.A01270 Eucalyptus grandis HOM05D005507 ORTHO05D007316 2.6e-06 57.8 122 38.5
QL07p048577 Quercus lobata HOM05D005507 ORTHO05D007316 2.6e-06 57.8 149 32.2
TWI53G1275 Tripterygium wilfordii HOM05D005507 ORTHO05D007316 2.6e-06 57.8 124 35.5
VMungo0331G0190 Vigna mungo HOM05D005507 ORTHO05D007316 3.4e-06 57.4 155 32.3
Lj3g0017176 Lotus japonicus HOM05D005507 ORTHO05D007316 4.5e-06 57.0 116 36.2
Nitab4.5_0000705g0210 Nicotiana tabacum HOM05D005507 ORTHO05D007316 4.5e-06 57.0 48 62.5
EL10As1g23036 Beta vulgaris HOM05D005507 ORTHO05D007316 5.8e-06 56.6 35 71.4
PGR004G0811 Punica granatum HOM05D005507 ORTHO05D007316 5.8e-06 56.6 122 37.7
MBI14_g36928_MAGBIO Magnolia biondii HOM05D005507 ORTHO05D007316 7.6e-06 56.2 50 56.0
Sed0014596 Sechium edule HOM05D005507 ORTHO05D007316 7.6e-06 56.2 114 32.5
ECA247G0900 Erigeron canadensis HOM05D006708 ORTHO05D008321 9.9e-06 55.8 87 42.5


User provided reference genes

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