Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G2706 Erigeron canadensis HOM05D002484 ORTHO05D002541 6.4e-60 233.8 112 100.0
HanXRQChr16g0505511 Helianthus annuus HOM05D002484 ORTHO05D002541 2.2e-44 182.2 107 82.2
Lsat_1_v5_gn_5_65860 Lactuca sativa HOM05D002484 ORTHO05D002541 8.5e-44 180.3 102 82.4
HanXRQChr16g0505521 Helianthus annuus HOM05D002484 ORTHO05D002541 3.6e-42 174.9 92 88.0
HanXRQChr16g0505831 Helianthus annuus HOM05D002484 ORTHO05D002541 1.3e-36 156.4 90 78.9
ECA236G3870 Erigeron canadensis HOM05D002484 ORTHO05D002541 1.6e-34 149.4 115 66.1
HanXRQChr16g0506041 Helianthus annuus HOM05D002484 ORTHO05D002541 1.8e-22 109.4 78 61.5
Lsat_1_v5_gn_7_90221 Lactuca sativa HOM05D002484 ORTHO05D002541 1.8e-22 109.4 80 66.2
ECA236G2297 Erigeron canadensis HOM05D002484 ORTHO05D002541 9.1e-22 107.1 78 60.3
TWI75G1456 Tripterygium wilfordii HOM05D002484 ORTHO05D002541 5.9e-21 104.4 73 61.6
Atru.chr5.3054 Acer truncatum HOM05D002484 ORTHO05D002541 1.3e-20 103.2 85 57.6
Atru.chr5.3052 Acer truncatum HOM05D002484 ORTHO05D002541 3.2e-19 98.6 76 61.8
HanXRQChr16g0505861 Helianthus annuus HOM05D018786 ORTHO05D002541 2.1e-18 95.9 96 52.1
DCAR_028974 Daucus carota HOM05D002484 ORTHO05D002541 4.7e-18 94.7 82 59.8
HanXRQChr16g0505571 Helianthus annuus HOM05D002484 ORTHO05D002541 1.4e-17 93.2 81 58.0
BraA08t34910Z Brassica rapa HOM05D002484 ORTHO05D002541 5.2e-17 91.3 66 56.1
AT1G19610 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 6.7e-17 90.9 78 51.3
TWI79G0221 Tripterygium wilfordii HOM05D002484 ORTHO05D002541 6.7e-17 90.9 76 55.3
AL1G32330 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 8.8e-17 90.5 78 51.3
BcaB03g12908 Brassica carinata HOM05D002484 ORTHO05D002541 1.2e-16 90.1 77 53.2
Thhalv10009242m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.5e-16 89.7 78 51.3
Sed0028225 Sechium edule HOM05D002484 ORTHO05D002541 1.5e-16 89.7 78 52.6
Carub.0001s1915 Capsella rubella HOM05D002484 ORTHO05D002541 2.0e-16 89.4 66 56.1
BolC8t49576H Brassica oleracea HOM05D002484 ORTHO05D002541 4.4e-16 88.2 78 48.7
DCAR_001564 Daucus carota HOM05D002484 ORTHO05D002541 5.7e-16 87.8 81 55.6
HanXRQChr16g0505531 Helianthus annuus HOM05D002484 ORTHO05D220526 7.5e-16 87.4 88 50.0
Sp1g17450 Schrenkiella parvula HOM05D002484 ORTHO05D002541 7.5e-16 87.4 78 48.7
Migut.N00483 Erythranthe guttata HOM05D002484 ORTHO05D002541 1.3e-15 86.7 67 52.2
PSO302G0221 Papaver somniferum HOM05D018786 ORTHO05D002541 1.3e-15 86.7 86 46.5
COL.COLO4_25964 Corchorus olitorius HOM05D002484 ORTHO05D002541 1.7e-15 86.3 72 52.8
HanXRQChr03g0074221 Helianthus annuus HOM05D002484 ORTHO05D002541 2.8e-15 85.5 49 65.3
HanXRQChr03g0074231 Helianthus annuus HOM05D002484 ORTHO05D002541 2.8e-15 85.5 49 65.3
HanXRQChr03g0074241 Helianthus annuus HOM05D002484 ORTHO05D002541 2.8e-15 85.5 49 65.3
FAN20G2159 Fragaria x ananassa HOM05D002484 ORTHO05D002541 3.7e-15 85.1 81 49.4
Lsat_1_v5_gn_7_90281 Lactuca sativa HOM05D002484 ORTHO05D002541 3.7e-15 85.1 59 61.0
Aa31LG7G4230 Aethionema arabicum HOM05D002484 ORTHO05D002541 4.8e-15 84.7 56 60.7
Lsat_1_v5_gn_7_90580 Lactuca sativa HOM05D002484 ORTHO05D002541 6.3e-15 84.3 60 60.0
HanXRQChr04g0128041 Helianthus annuus HOM05D002484 ORTHO05D002541 8.2e-15 84.0 73 47.9
ECA236G3295 Erigeron canadensis HOM05D002484 ORTHO05D002541 1.1e-14 83.6 82 52.4
Lsat_1_v5_gn_7_90700 Lactuca sativa HOM05D002484 ORTHO05D002541 1.1e-14 83.6 57 59.6
Actinidia27667 Actinidia chinensis HOM05D002484 ORTHO05D002541 1.4e-14 83.2 80 55.0
HanXRQChr16g0505921 Helianthus annuus HOM05D018786 ORTHO05D002541 1.4e-14 83.2 108 41.7
Nn3g20428 Nelumbo nucifera HOM05D002484 ORTHO05D002541 1.4e-14 83.2 81 51.9
FvH4_2g11470 Fragaria vesca HOM05D002484 ORTHO05D002541 1.8e-14 82.8 74 50.0
Thecc.02G082200 Theobroma cacao HOM05D002484 ORTHO05D002541 1.8e-14 82.8 78 47.4
Lsat_1_v5_gn_7_90181 Lactuca sativa HOM05D002484 ORTHO05D002541 2.4e-14 82.4 90 47.8
Lsat_1_v5_gn_7_90800 Lactuca sativa HOM05D002484 ORTHO05D002541 2.4e-14 82.4 61 50.8
Peaxi162Scf00324g00715 Petunia axillaris HOM05D002484 ORTHO05D002541 3.1e-14 82.0 81 48.1
HanXRQChr16g0505541 Helianthus annuus HOM05D002484 ORTHO05D002541 4.1e-14 81.6 83 51.8
HanXRQChr16g0505561 Helianthus annuus HOM05D002484 ORTHO05D002541 4.1e-14 81.6 83 51.8
ECA236G4765 Erigeron canadensis HOM05D002484 ORTHO05D002541 5.3e-14 81.3 82 51.2
COL.COLO4_25966 Corchorus olitorius HOM05D002484 ORTHO05D002541 7.0e-14 80.9 80 48.8
FAN20G1957 Fragaria x ananassa HOM05D002484 ORTHO05D002541 7.0e-14 80.9 68 48.5
Prupe.1G376000 Prunus persica HOM05D002484 ORTHO05D002541 7.0e-14 80.9 58 51.7
Peaxi162Scf00324g00722 Petunia axillaris HOM05D002484 ORTHO05D002541 9.1e-14 80.5 81 46.9
ATR1149G048 Amborella trichopoda HOM05D002484 ORTHO05D002541 1.6e-13 79.7 68 54.4
BcaC08g46653 Brassica carinata HOM05D002484 ORTHO05D002541 1.6e-13 79.7 58 53.4
C06p46130 Brassica napus HOM05D002484 ORTHO05D002541 1.6e-13 79.7 58 53.4
BolC6t39666H Brassica oleracea HOM05D002484 ORTHO05D002541 1.6e-13 79.7 58 53.4
Peaxi162Scf00324g00716 Petunia axillaris HOM05D002484 ORTHO05D002541 1.6e-13 79.7 72 48.6
ECA236G0419 Erigeron canadensis HOM05D002484 ORTHO05D002541 4.5e-13 78.2 81 48.1
DCAR_028972 Daucus carota HOM05D002484 ORTHO05D002541 7.7e-13 77.4 86 41.9
PGR031G2841 Punica granatum HOM05D002484 ORTHO05D002541 7.7e-13 77.4 67 49.3
RcHm_v2.0_Chr6g0301471 Rosa chinensis HOM05D002484 ORTHO05D002541 1.0e-12 77.0 73 45.2
AL7G45400 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 2.2e-12 75.9 78 46.2
BcaB03g14925 Brassica carinata HOM05D002484 ORTHO05D002541 2.2e-12 75.9 76 46.1
BraA07t31386Z Brassica rapa HOM05D002484 ORTHO05D002541 2.9e-12 75.5 86 40.7
TWI56G0984 Tripterygium wilfordii HOM05D002484 ORTHO05D002541 5.0e-12 74.7 72 50.0
BcaC08g43338 Brassica carinata HOM05D002484 ORTHO05D002541 8.5e-12 73.9 75 49.3
ECA236G0027 Erigeron canadensis HOM05D002484 ORTHO05D002541 8.5e-12 73.9 54 51.9
Carub.0007s0108 Capsella rubella HOM05D002484 ORTHO05D002541 1.9e-11 72.8 78 39.7
COL.COLO4_25963 Corchorus olitorius HOM05D002484 ORTHO05D002541 4.2e-11 71.6 77 45.5
MELO3C018229.2 Cucumis melo HOM05D002484 ORTHO05D002541 7.2e-11 70.9 77 48.1
Glyma.18G027700 Glycine max HOM05D002484 ORTHO05D002541 9.4e-11 70.5 49 59.2
Solyc01g011495.1 Solanum lycopersicum HOM05D002484 ORTHO05D002541 1.6e-10 69.7 78 46.2
CsaV3_3G044510 Cucumis sativus L. HOM05D002484 ORTHO05D002541 2.1e-10 69.3 77 46.8
Carub.0007s3201 Capsella rubella HOM05D002484 ORTHO05D002541 2.7e-10 68.9 79 43.0
MD08G1027500 Malus domestica HOM05D002484 ORTHO05D002541 2.7e-10 68.9 67 41.8
arahy.Tifrunner.gnm1.ann1.81M2S6 Arachis hypogaea HOM05D002484 ORTHO05D002541 3.6e-10 68.6 75 45.3
BcaC08g45552 Brassica carinata HOM05D002484 ORTHO05D002541 3.6e-10 68.6 79 44.3
C06p32340 Brassica napus HOM05D002484 ORTHO05D002541 3.6e-10 68.6 79 44.3
Atru.chr13.431 Acer truncatum HOM05D002484 ORTHO05D002541 4.7e-10 68.2 75 42.7
A08p29750 Brassica napus HOM05D002484 ORTHO05D002541 4.7e-10 68.2 41 63.4
C08p19530 Brassica napus HOM05D002484 ORTHO05D002541 4.7e-10 68.2 41 63.4
Nitab4.5_0000023g0340 Nicotiana tabacum HOM05D002484 ORTHO05D002541 4.7e-10 68.2 78 44.9
Atru.chr5.3053 Acer truncatum HOM05D002484 ORTHO05D002541 6.1e-10 67.8 57 54.4
Aqoxy5G01512 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 6.1e-10 67.8 80 43.8
Lsat_1_v5_gn_7_90161 Lactuca sativa HOM05D002484 ORTHO05D002541 6.1e-10 67.8 51 54.9
Psat4g203560 Pisum sativum HOM05D002484 ORTHO05D002541 6.1e-10 67.8 78 46.2
Psat4g203640 Pisum sativum HOM05D002484 ORTHO05D002541 6.1e-10 67.8 79 46.8
PGR031G0268 Punica granatum HOM05D002484 ORTHO05D002541 6.1e-10 67.8 71 42.3
Sp5g30950 Schrenkiella parvula HOM05D002484 ORTHO05D002541 6.1e-10 67.8 79 44.3
Thhalv10019398m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 8.0e-10 67.4 79 43.0
Aqoxy4G00457 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 1.0e-09 67.0 79 44.3
Carub.0002s2269 Capsella rubella HOM05D002484 ORTHO05D002541 1.0e-09 67.0 80 45.0
C06p32380 Brassica napus HOM05D002484 ORTHO05D002541 1.4e-09 66.6 79 43.0
CARHR247530 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.4e-09 66.6 78 38.5
Medtr8g012805 Medicago truncatula HOM05D002484 ORTHO05D002541 1.4e-09 66.6 81 46.9
BcaC08g45554 Brassica carinata HOM05D002484 ORTHO05D002541 1.8e-09 66.2 74 41.9
BcaC08g45556 Brassica carinata HOM05D002484 ORTHO05D002541 1.8e-09 66.2 74 41.9
Ciclev10030125m.g Citrus clementina HOM05D002484 ORTHO05D002541 1.8e-09 66.2 78 39.7
A07p41390 Brassica napus HOM05D002484 ORTHO05D002541 2.3e-09 65.9 79 43.0
BraA07t31672Z Brassica rapa HOM05D002484 ORTHO05D002541 2.3e-09 65.9 79 43.0
Carub.0002s2270 Capsella rubella HOM05D002484 ORTHO05D002541 2.3e-09 65.9 80 45.0
AT2G26010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 3.0e-09 65.5 81 46.9
Carub.0002s2268 Capsella rubella HOM05D002484 ORTHO05D002541 3.0e-09 65.5 80 43.8
Duzib093G0380 Durio zibethinus HOM05D002484 ORTHO05D002541 3.0e-09 65.5 48 54.2
Carub.0002s2271 Capsella rubella HOM05D002484 ORTHO05D002541 4.0e-09 65.1 80 43.8
Thhalv10019399m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 4.0e-09 65.1 79 41.8
Solyc07g009260.3 Solanum lycopersicum HOM05D002484 ORTHO05D002541 4.0e-09 65.1 69 43.5
Thecc.08G031200 Theobroma cacao HOM05D002484 ORTHO05D002541 4.0e-09 65.1 53 49.1
BcaB02g07044 Brassica carinata HOM05D002484 ORTHO05D002541 5.2e-09 64.7 68 44.1
Ciclev10029712m.g Citrus clementina HOM05D002484 ORTHO05D002541 5.2e-09 64.7 71 43.7
Ciclev10029828m.g Citrus clementina HOM05D002484 ORTHO05D002541 5.2e-09 64.7 71 43.7
FAN20G0586 Fragaria x ananassa HOM05D002484 ORTHO05D002541 6.8e-09 64.3 82 41.5
Solyc01g011435.1 Solanum lycopersicum HOM05D002484 ORTHO05D002541 6.8e-09 64.3 80 41.2
Aqoxy4G00455 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 8.8e-09 63.9 53 50.9
AL2G35830 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 8.8e-09 63.9 49 55.1
Medtr8g012835 Medicago truncatula HOM05D002484 ORTHO05D002541 8.8e-09 63.9 68 45.6
Prupe.8G071600 Prunus persica HOM05D002484 ORTHO05D002541 8.8e-09 63.9 87 41.4
A07p41370 Brassica napus HOM05D002484 ORTHO05D002541 1.2e-08 63.5 75 42.7
BraA07t31670Z Brassica rapa HOM05D002484 ORTHO05D002541 1.2e-08 63.5 75 42.7
CAN.G1126.34 Capsicum annuum HOM05D002484 ORTHO05D002541 1.2e-08 63.5 69 42.0
Sp5g30970 Schrenkiella parvula HOM05D002484 ORTHO05D002541 1.2e-08 63.5 79 41.8
AL7G11150 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 1.5e-08 63.2 79 41.8
Duzib248G1325 Durio zibethinus HOM05D001795 ORTHO05D002541 2.0e-08 62.8 56 48.2
AL2G35840 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 2.6e-08 62.4 80 42.5
Lj3g0015575 Lotus japonicus HOM05D002484 ORTHO05D002541 2.6e-08 62.4 68 41.2
AT5G44430 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 3.4e-08 62.0 80 42.5
BolC6t38355H Brassica oleracea HOM05D002484 ORTHO05D002541 3.4e-08 62.0 80 42.5
CAN.G559.4 Capsicum annuum HOM05D002484 ORTHO05D002541 3.4e-08 62.0 84 42.9
Thhalv10019395m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 3.4e-08 62.0 75 41.3
Thhalv10029442m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 3.4e-08 62.0 78 34.6
AT2G26020 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 4.4e-08 61.6 80 42.5
CARHR069280 Cardamine hirsuta HOM05D002484 ORTHO05D002541 4.4e-08 61.6 66 45.5
AT5G44420 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 7.5e-08 60.8 80 42.5
Thhalv10000662m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 7.5e-08 60.8 70 45.7
AT1G75830 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 9.8e-08 60.5 80 41.2
CARHR069310 Cardamine hirsuta HOM05D002484 ORTHO05D002541 9.8e-08 60.5 80 42.5
CARHR069320 Cardamine hirsuta HOM05D002484 ORTHO05D002541 9.8e-08 60.5 83 39.8
Medtr8g012795 Medicago truncatula HOM05D002484 ORTHO05D002541 9.8e-08 60.5 68 42.6
Actinidia25332 Actinidia chinensis HOM05D002484 ORTHO05D002541 1.3e-07 60.1 73 45.2
BcaC08g47074 Brassica carinata HOM05D002484 ORTHO05D002541 1.3e-07 60.1 75 41.3
Carub.0002s2274 Capsella rubella HOM05D002484 ORTHO05D002541 1.3e-07 60.1 80 40.0
BcaC03g15629 Brassica carinata HOM05D002484 ORTHO05D002541 1.7e-07 59.7 80 41.2
C02p33630 Brassica napus HOM05D002484 ORTHO05D002541 1.7e-07 59.7 80 41.2
BolC2t09341H Brassica oleracea HOM05D002484 ORTHO05D002541 1.7e-07 59.7 80 41.2
CARHR069270 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.7e-07 59.7 80 40.0
Nitab4.5_0005600g0020 Nicotiana tabacum HOM05D002484 ORTHO05D002541 1.7e-07 59.7 60 50.0
A05p26930 Brassica napus HOM05D002484 ORTHO05D002541 2.2e-07 59.3 70 40.0
BraA05t21573Z Brassica rapa HOM05D002484 ORTHO05D002541 2.2e-07 59.3 70 40.0
Carub.0002s2272 Capsella rubella HOM05D002484 ORTHO05D002541 2.2e-07 59.3 80 41.2
Carub.0002s2273 Capsella rubella HOM05D002484 ORTHO05D002541 2.2e-07 59.3 80 41.2
CARHR069370 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.2e-07 59.3 80 41.2
CARHR284300 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.2e-07 59.3 74 41.9
BcaB05g24952 Brassica carinata HOM05D002484 ORTHO05D002541 2.8e-07 58.9 80 41.2
BcaNung01275 Brassica carinata HOM05D002484 ORTHO05D002541 2.8e-07 58.9 53 43.4
Thhalv10019394m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 2.8e-07 58.9 71 45.1
Hma1.2p1_1051F.1_g252040 Hydrangea macrophylla HOM05D002484 ORTHO05D002541 2.8e-07 58.9 80 42.5
Medtr8g012775 Medicago truncatula HOM05D002484 ORTHO05D002541 3.7e-07 58.5 74 44.6
BcaB02g07045 Brassica carinata HOM05D002484 ORTHO05D002541 4.8e-07 58.2 73 41.1
BcaC08g47321 Brassica carinata HOM05D002484 ORTHO05D002541 4.8e-07 58.2 80 41.2
A02p20270 Brassica napus HOM05D002484 ORTHO05D002541 4.8e-07 58.2 69 42.0
A07p41360 Brassica napus HOM05D002484 ORTHO05D002541 4.8e-07 58.2 75 38.7
C01p00390 Brassica napus HOM05D002484 ORTHO05D002541 4.8e-07 58.2 76 38.2
BraA02t07061Z Brassica rapa HOM05D002484 ORTHO05D002541 4.8e-07 58.2 69 42.0
BraA07t31669Z Brassica rapa HOM05D002484 ORTHO05D002541 4.8e-07 58.2 75 38.7
Thhalv10019396m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 4.8e-07 58.2 80 38.8
C06p32330 Brassica napus HOM05D002484 ORTHO05D002541 6.3e-07 57.8 80 40.0
C06p49790 Brassica napus HOM05D002484 ORTHO05D002541 6.3e-07 57.8 80 41.2
TPR.G11190 Trifolium pratense HOM05D002484 ORTHO05D002541 6.3e-07 57.8 66 43.9
TPR.G17112 Trifolium pratense HOM05D002484 ORTHO05D002541 8.3e-07 57.4 70 40.0
A07p28700 Brassica napus HOM05D002484 ORTHO05D002541 1.1e-06 57.0 80 40.0
BraA07t30510Z Brassica rapa HOM05D002484 ORTHO05D002541 1.1e-06 57.0 80 40.0
Carub.0007s0110 Capsella rubella HOM05D002484 ORTHO05D002541 1.1e-06 57.0 82 41.5
CARHR069380 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.1e-06 57.0 78 41.0
Medtr8g012785 Medicago truncatula HOM05D002484 ORTHO05D002541 1.1e-06 57.0 53 49.1
CARHR216420 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.4e-06 56.6 80 37.5
Nitab4.5_0000023g0290 Nicotiana tabacum HOM05D002484 ORTHO05D002541 1.4e-06 56.6 78 41.0
Thhalv10019397m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.8e-06 56.2 80 40.0
Medtr8g012800 Medicago truncatula HOM05D002484 ORTHO05D002541 2.4e-06 55.8 69 37.7
Nitab4.5_0000023g0330 Nicotiana tabacum HOM05D002484 ORTHO05D002541 3.1e-06 55.5 95 37.9
CARHR069290 Cardamine hirsuta HOM05D002484 ORTHO05D002541 5.4e-06 54.7 80 41.2
BcaC08g45551 Brassica carinata HOM05D002484 ORTHO05D002541 9.1e-06 53.9 74 39.2
BcaC08g47323 Brassica carinata HOM05D002484 ORTHO05D002541 9.1e-06 53.9 46 47.8
PSO675G3522 Papaver somniferum HOM05D018786 ORTHO05D050213 9.1e-06 53.9 91 35.2
Peaxi162Scf00324g00714 Petunia axillaris HOM05D024896 ORTHO05D002541 9.1e-06 53.9 73 34.2


User provided reference genes

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