Gene: AT5G44420

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G44420
  • Transcript Identifier AT5G44420.1
  • Gene Type Coding gene
  • Location Chr5 : 17907216-17907550 : negative

Gene Family Information

  • ID HOM05D002484
  • #Genes/#Species 274/52
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G44420.1
  • symbol PDF1.2
  • Alias LCR77,LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 77,PDF1.2A,PLANT DEFENSIN 1.2A
  • uniprot Q9FI23

Descriptions

  • Description plant defensin 1.2
  • Computational description plant defensin 1.2 (PDF1.2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to ethylene stimulus, response to jasmonic acid stimulus, jasmonic acid and ethylene-dependent systemic resistance, defense response, response to insect; LOCATED IN: endomembrane system, cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Gamma thionin (InterPro:IPR008176), Knottin (InterPro:IPR003614); BEST Arabidopsis thaliana protein match is: plant defensin 1.2b (TAIR:AT2G26020.1); Has 182 Blast hits to 182 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 181; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009625
IEP
Gene Ontologyresponse to insect1
GO:0009753
IEP
Gene Ontologyresponse to jasmonic acid2
GO:0009723
IEP
Gene Ontologyresponse to ethylene3
GO:0009861
TAS
Gene Ontologyjasmonic acid and ethylene-dependent systemic resistance3
GO:0009751
IEP
Gene Ontologyresponse to salicylic acid4
GO:0006952
IEA
GOA Databasedefense response
GO:0006952
TAS
Gene Ontologydefense response5
GO:0006952
IEA
InterProdefense response
GO:0050832
IEA
GOA Databasedefense response to fungus
GO:0031640
IEA
GOA Databasekilling of cells of other organism

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding6

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036574 Knottin, scorpion toxin-like superfamily
IPR003614 Knottin, scorpion toxin-like
Mapman id Description
26.9.3.2.1 External stimuli response.pathogen.defense mechanisms.defensin activities.defensin (PDF1)