Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 6.7e-125 450.7 223 100.0
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 1.4e-85 320.1 220 72.7
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 5.2e-77 291.6 191 71.2
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 7.5e-76 287.7 192 73.4
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 4.9e-75 285.0 189 73.0
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 9.2e-74 280.8 193 71.0
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 2.0e-68 263.1 189 65.6
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 7.5e-68 261.2 186 65.1
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 1.3e-67 260.4 185 67.0
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 4.9e-67 258.5 186 64.5
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 4.9e-67 258.5 191 63.9
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 8.3e-67 257.7 190 64.7
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 8.3e-67 257.7 189 65.1
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 1.4e-66 256.9 185 65.4
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.8e-66 256.5 187 65.2
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 2.4e-66 256.1 192 63.0
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 2.4e-66 256.1 184 66.3
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.1e-66 255.4 195 62.6
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 4.1e-66 255.4 185 64.9
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 4.1e-66 255.4 185 64.3
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 7.0e-66 254.6 190 64.2
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 7.0e-66 254.6 190 64.2
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 7.0e-66 254.6 185 64.9
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 7.0e-66 254.6 183 65.0
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 9.2e-66 254.2 185 63.8
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 1.2e-65 253.8 186 61.8
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 2.0e-65 253.1 183 65.6
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 5.9e-65 251.5 185 62.7
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.0e-64 250.8 217 58.5
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 1.3e-64 250.4 185 63.2
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 1.3e-64 250.4 192 62.5
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.7e-64 250.0 184 64.7
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 2.3e-64 249.6 189 63.5
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 3.0e-64 249.2 189 61.9
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 3.0e-64 249.2 189 61.9
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 5.0e-64 248.4 185 63.8
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 5.0e-64 248.4 194 61.9
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 6.6e-64 248.1 186 63.4
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 6.6e-64 248.1 194 61.3
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 8.6e-64 247.7 186 63.4
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 8.6e-64 247.7 189 63.0
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 8.6e-64 247.7 205 59.0
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.1e-63 247.3 220 56.8
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 1.5e-63 246.9 194 60.8
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 1.9e-63 246.5 190 63.2
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 1.9e-63 246.5 185 63.2
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 3.3e-63 245.7 190 62.1
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 3.3e-63 245.7 189 62.4
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 4.3e-63 245.4 189 63.0
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 5.6e-63 245.0 189 63.0
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 9.5e-63 244.2 192 61.5
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 9.5e-63 244.2 188 60.6
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.2e-62 243.8 202 59.4
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 1.6e-62 243.4 190 61.1
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 1.6e-62 243.4 183 63.9
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 2.1e-62 243.0 189 61.9
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 3.6e-62 242.3 190 62.6
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 4.7e-62 241.9 190 61.6
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 4.7e-62 241.9 189 62.4
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 4.7e-62 241.9 186 62.4
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 1.0e-61 240.7 205 56.6
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 1.4e-61 240.4 189 59.3
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 1.8e-61 240.0 188 59.6
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 2.3e-61 239.6 184 62.5
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 3.1e-61 239.2 188 62.8
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 4.0e-61 238.8 186 60.2
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 5.2e-61 238.4 188 59.0
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 6.8e-61 238.0 183 62.3
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 2.6e-60 236.1 188 60.1
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 2.6e-60 236.1 185 61.1
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 3.4e-60 235.7 184 60.9
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 4.4e-60 235.3 185 61.6
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 4.4e-60 235.3 189 61.4
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 9.8e-60 234.2 184 60.9
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 9.8e-60 234.2 186 61.8
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 9.8e-60 234.2 188 59.0
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 1.3e-59 233.8 184 60.9
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 2.2e-59 233.0 183 61.2
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 8.3e-59 231.1 188 58.0
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 1.4e-58 230.3 184 58.7
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 2.4e-58 229.6 184 59.2
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 2.4e-58 229.6 184 60.3
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 3.2e-58 229.2 184 58.7
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 3.2e-58 229.2 216 54.2
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 4.1e-58 228.8 184 59.2
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 1.2e-57 227.3 184 58.7
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 1.2e-57 227.3 184 58.7
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 1.6e-57 226.9 189 59.3
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 4.6e-57 225.3 193 54.9
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 7.8e-57 224.6 190 55.3
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 5.0e-56 221.9 190 55.3
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.9e-55 219.9 189 56.6
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 7.3e-55 218.0 224 50.0
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 7.3e-55 218.0 190 56.3
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 7.3e-55 218.0 183 56.8
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 4.0e-53 212.2 187 56.7
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 6.8e-53 211.5 214 52.3
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 1.5e-52 210.3 186 53.8
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 5.8e-52 208.4 180 56.1
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 2.2e-51 206.5 189 55.0
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 4.9e-51 205.3 187 52.9
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 8.3e-51 204.5 185 55.1
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.4e-50 203.8 189 55.0
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 1.6e-49 200.3 188 53.2
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.1e-49 199.9 190 53.7
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.7e-49 199.5 150 62.7
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 2.3e-48 196.4 188 51.6
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 2.3e-48 196.4 193 49.2
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 2.3e-48 196.4 189 51.9
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 3.9e-48 195.7 193 52.3
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 5.1e-48 195.3 146 60.3
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 6.6e-48 194.9 188 51.6
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 8.6e-48 194.5 189 50.3
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 1.6e-46 190.3 181 53.6
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.1e-46 189.9 189 52.9
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 4.7e-46 188.7 190 49.5
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 5.8e-44 181.8 180 51.7
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 3.0e-40 169.5 136 60.3
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 5.6e-39 165.2 189 47.6
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 3.1e-29 132.9 99 63.6
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 1.3e-27 127.5 112 57.1
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 2.2e-27 126.7 79 72.2
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.4e-21 107.5 101 53.5
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 5.8e-20 102.1 110 46.4
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 7.4e-15 85.1 121 42.1
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 3.4e-12 76.3 89 42.7
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 3.3e-07 59.7 101 33.7


User provided reference genes

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