Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1893 Erigeron canadensis HOM05D004784 ORTHO05D005762 3.6e-216 754.6 373 100.0
Lsat_1_v5_gn_7_16480 Lactuca sativa HOM05D004784 ORTHO05D005762 1.8e-191 672.5 388 87.6
Lj1A1232G87 Lonicera japonica HOM05D004784 ORTHO05D005762 6.9e-191 670.6 404 81.2
MELO3C002444.2 Cucumis melo HOM05D004784 ORTHO05D005762 1.2e-190 669.8 408 81.4
FvH4_3g01820 Fragaria vesca HOM05D004784 ORTHO05D005762 2.0e-190 669.1 406 81.8
RcHm_v2.0_Chr5g0002651 Rosa chinensis HOM05D004784 ORTHO05D005762 2.0e-190 669.1 406 81.8
FAN25G0478 Fragaria x ananassa HOM05D004784 ORTHO05D005762 3.4e-190 668.3 406 81.8
CsaV3_1G010620 Cucumis sativus L. HOM05D004784 ORTHO05D005762 7.6e-190 667.2 408 80.9
SalBow8G0639 Salvia bowleyana HOM05D004784 ORTHO05D005762 7.6e-190 667.2 406 81.3
FAN21G1227 Fragaria x ananassa HOM05D004784 ORTHO05D005762 6.4e-189 664.1 406 81.3
Lj6g0010262 Lotus japonicus HOM05D004784 ORTHO05D005762 6.4e-189 664.1 408 81.1
Nitab4.5_0007963g0010 Nicotiana tabacum HOM05D004784 ORTHO05D005762 8.4e-189 663.7 406 79.8
Cc09_g01490 Coffea canephora HOM05D004784 ORTHO05D005762 1.4e-188 662.9 408 80.1
Solyc02g080810.3 Solanum lycopersicum HOM05D004784 ORTHO05D005762 1.4e-188 662.9 406 80.0
Nitab4.5_0002695g0040 Nicotiana tabacum HOM05D004784 ORTHO05D005762 3.2e-188 661.8 406 79.6
Sed0013135 Sechium edule HOM05D004784 ORTHO05D005762 3.2e-188 661.8 408 80.1
Gohir.A06G149200 Gossypium hirsutum HOM05D004784 ORTHO05D005762 4.2e-188 661.4 408 80.4
Sed0006727 Sechium edule HOM05D004784 ORTHO05D005762 4.2e-188 661.4 408 79.7
CANSAT56G2555 Cannabis sativa HOM05D004784 ORTHO05D005762 1.2e-187 659.8 408 79.7
Prupe.4G018500 Prunus persica HOM05D004784 ORTHO05D005762 1.2e-187 659.8 409 80.2
Lalb_Chr18g0056491 Lupinus albus HOM05D004784 ORTHO05D005762 1.6e-187 659.4 406 80.5
DCAR_008168 Daucus carota HOM05D004784 ORTHO05D005762 2.1e-187 659.1 421 79.1
Medtr4g132360 Medicago truncatula HOM05D004784 ORTHO05D005762 2.1e-187 659.1 408 79.2
Sopen02g025500 Solanum pennellii HOM05D004784 ORTHO05D005762 2.1e-187 659.1 406 79.3
PGSC0003DMG400016444 Solanum tuberosum HOM05D004784 ORTHO05D005762 2.1e-187 659.1 406 79.3
Peaxi162Scf00131g01117 Petunia axillaris HOM05D004784 ORTHO05D005762 4.6e-187 657.9 407 78.9
ClCG03G004610 Citrullus lanatus HOM05D004784 ORTHO05D005762 6.0e-187 657.5 408 79.7
Ca_21072_v3 Cicer arietinum L. HOM05D004784 ORTHO05D005762 7.9e-187 657.1 408 78.9
Lalb_Chr15g0087671 Lupinus albus HOM05D004784 ORTHO05D005762 7.9e-187 657.1 406 80.5
TPR.G37066 Trifolium pratense HOM05D004784 ORTHO05D005762 7.9e-187 657.1 408 78.7
QL05p072692 Quercus lobata HOM05D004784 ORTHO05D005762 1.3e-186 656.4 407 79.1
Manes.17G025900 Manihot esculenta HOM05D004784 ORTHO05D005762 1.8e-186 656.0 408 79.4
arahy.Tifrunner.gnm1.ann1.EH8QHL Arachis hypogaea HOM05D004784 ORTHO05D005762 2.3e-186 655.6 408 80.1
Glyma.17G012000 Glycine max HOM05D004784 ORTHO05D005762 3.0e-186 655.2 408 79.2
unitig_92.g28113 Utricularia gibba HOM05D004784 ORTHO05D005762 3.0e-186 655.2 408 79.4
Glyma.07G262100 Glycine max HOM05D004784 ORTHO05D005762 3.9e-186 654.8 408 79.2
Gorai.010G181500 Gossypium raimondii HOM05D004784 ORTHO05D005762 3.9e-186 654.8 408 79.7
MD10G1323700 Malus domestica HOM05D004784 ORTHO05D005762 3.9e-186 654.8 409 80.0
Phvul.003G080400 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 6.7e-186 654.1 408 78.4
CAN.G1014.12 Capsicum annuum HOM05D004784 ORTHO05D005762 1.5e-185 652.9 406 79.1
Gohir.D06G155300 Gossypium hirsutum HOM05D004784 ORTHO05D005762 1.5e-185 652.9 408 79.4
COL.COLO4_31797 Corchorus olitorius HOM05D004784 ORTHO05D005762 1.9e-185 652.5 408 79.4
Hma1.2p1_0091F.1_g046500 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 1.9e-185 652.5 406 79.3
Hma1.2p1_0298F.1_g117720 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 1.9e-185 652.5 405 79.8
Thecc.06G223500 Theobroma cacao HOM05D004784 ORTHO05D005762 1.9e-185 652.5 408 79.7
QL02p099920 Quercus lobata HOM05D004784 ORTHO05D005762 3.3e-185 651.7 407 79.9
Rhsim13G0152700 Rhododendron simsii HOM05D004784 ORTHO05D005762 9.6e-185 650.2 409 80.0
VMungo1215G1817 Vigna mungo HOM05D004784 ORTHO05D005762 9.6e-185 650.2 408 78.4
Glyma.09G004700 Glycine max HOM05D004784 ORTHO05D005762 1.3e-184 649.8 408 78.7
Oeu002744.1 Olea europaea HOM05D004784 ORTHO05D005762 2.1e-184 649.0 406 78.6
Duzib192G0808 Durio zibethinus HOM05D004784 ORTHO05D005762 2.8e-184 648.7 408 78.7
Gohir.A05G171500 Gossypium hirsutum HOM05D004784 ORTHO05D005762 3.6e-184 648.3 408 79.4
MSTRG.7197 Avicennia marina HOM05D004784 ORTHO05D005762 6.2e-184 647.5 406 78.6
Haze_06821 Corylus avellana HOM05D004784 ORTHO05D005762 6.2e-184 647.5 406 78.8
Dinv13913 Davidia involucrata HOM05D004784 ORTHO05D005762 6.2e-184 647.5 406 78.8
vmacro03682 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 8.1e-184 647.1 422 77.5
TWI63G0560 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 1.1e-183 646.7 406 79.3
CiPaw.09G093700 Carya illinoinensis HOM05D004784 ORTHO05D005762 1.8e-183 646.0 406 78.1
Dinv20065 Davidia involucrata HOM05D004784 ORTHO05D005762 1.8e-183 646.0 403 78.7
PGR142G1596 Punica granatum HOM05D004784 ORTHO05D005762 1.8e-183 646.0 408 80.4
Gohir.D05G174600 Gossypium hirsutum HOM05D004784 ORTHO05D005762 2.4e-183 645.6 408 79.2
Cfa000202 Carpinus fangiana HOM05D004784 ORTHO05D005762 4.0e-183 644.8 406 78.6
HanXRQChr15g0470421 Helianthus annuus HOM05D004784 ORTHO05D005762 4.0e-183 644.8 331 94.9
Migut.M01336 Erythranthe guttata HOM05D004784 ORTHO05D005762 5.3e-183 644.4 407 77.6
THA.LOC104809494 Tarenaya hassleriana HOM05D004784 ORTHO05D005762 5.3e-183 644.4 409 78.7
Oeu013835.1 Olea europaea HOM05D004784 ORTHO05D005762 9.0e-183 643.7 406 77.8
TWI38G1114 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 9.0e-183 643.7 406 78.8
Psat4g005920 Pisum sativum HOM05D004784 ORTHO05D005762 2.0e-182 642.5 409 77.5
TAR629G2745 Trochodendron aralioides HOM05D004784 ORTHO05D005762 2.0e-182 642.5 406 77.8
C08p47920 Brassica napus HOM05D004784 ORTHO05D005762 2.6e-182 642.1 409 78.7
Hund23455 Selenicereus undatus HOM05D004784 ORTHO05D005762 2.6e-182 642.1 406 77.3
BolC8t52329H Brassica oleracea HOM05D004784 ORTHO05D005762 3.4e-182 641.7 409 78.5
Eucgr.L02773 Eucalyptus grandis HOM05D004784 ORTHO05D005762 4.5e-182 641.3 406 78.6
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 5.8e-182 641.0 408 77.5
AL1G23030 Arabidopsis lyrata HOM05D004784 ORTHO05D005762 7.6e-182 640.6 409 78.7
AT1G11860 Arabidopsis thaliana HOM05D004784 ORTHO05D005762 7.6e-182 640.6 409 78.7
CiPaw.10G073000 Carya illinoinensis HOM05D004784 ORTHO05D005762 9.9e-182 640.2 406 77.6
Glyma.15G109300 Glycine max HOM05D004784 ORTHO05D005762 9.9e-182 640.2 408 77.7
Hund21422 Selenicereus undatus HOM05D004784 ORTHO05D005762 9.9e-182 640.2 406 77.3
Carub.0001s1151 Capsella rubella HOM05D004784 ORTHO05D005762 1.3e-181 639.8 409 78.2
MSTRG.14637 Avicennia marina HOM05D004784 ORTHO05D005762 1.7e-181 639.4 409 77.0
A09p64310 Brassica napus HOM05D004784 ORTHO05D005762 1.7e-181 639.4 409 78.0
BraA09t41774Z Brassica rapa HOM05D004784 ORTHO05D005762 1.7e-181 639.4 409 78.0
Aa31LG1G2870 Aethionema arabicum HOM05D004784 ORTHO05D005762 2.2e-181 639.0 409 78.7
arahy.Tifrunner.gnm1.ann1.PLZ2LX Arachis hypogaea HOM05D004784 ORTHO05D005762 2.2e-181 639.0 398 80.2
Sp1g10470 Schrenkiella parvula HOM05D004784 ORTHO05D005762 2.9e-181 638.6 409 78.2
CARHR012170 Cardamine hirsuta HOM05D004784 ORTHO05D005762 4.9e-181 637.9 409 78.0
SGA_v2.0_scaffold7G03812 Striga asiatica HOM05D004784 ORTHO05D005762 4.9e-181 637.9 433 74.4
Aqoxy1G03119 Aquilegia oxysepala HOM05D004784 ORTHO05D005762 6.4e-181 637.5 406 76.6
Thhalv10007781m.g Eutrema salsugineum HOM05D004784 ORTHO05D005762 6.4e-181 637.5 409 78.2
Ah.09g234740 Amaranthus hybridus HOM05D004784 ORTHO05D005762 3.2e-180 635.2 409 76.8
BraA08t35239Z Brassica rapa HOM05D004784 ORTHO05D005762 3.2e-180 635.2 410 78.8
Potri.004G009600 Populus trichocarpa HOM05D004784 ORTHO05D005762 5.5e-180 634.4 406 77.1
Potri.011G006800 Populus trichocarpa HOM05D004784 ORTHO05D005762 5.5e-180 634.4 406 77.1
Ciclev10015433m.g Citrus clementina HOM05D004784 ORTHO05D005762 1.2e-179 633.3 410 77.3
C08p14960 Brassica napus HOM05D004784 ORTHO05D005762 2.1e-179 632.5 410 78.0
BolC8t49127H Brassica oleracea HOM05D004784 ORTHO05D005762 2.1e-179 632.5 410 78.0
MBI02_g15378_MAGBIO Magnolia biondii HOM05D004784 ORTHO05D005762 2.1e-179 632.5 410 77.1
CDE05G1701 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 6.0e-179 630.9 408 75.7
Atru.chr10.2254 Acer truncatum HOM05D004784 ORTHO05D005762 1.0e-178 630.2 406 76.1
PSO541G3045 Papaver somniferum HOM05D004784 ORTHO05D005762 1.0e-178 630.2 407 75.7
PSO675G1799 Papaver somniferum HOM05D004784 ORTHO05D005762 1.3e-178 629.8 407 75.7
Sabra11G0005900 Salix brachista HOM05D004784 ORTHO05D005762 1.3e-178 629.8 406 76.8
RhsimUnG0232700 Rhododendron simsii HOM05D004784 ORTHO05D005762 1.8e-178 629.4 452 72.3
AUR62012328 Chenopodium quinoa HOM05D004784 ORTHO05D005762 3.0e-178 628.6 408 75.2
AUR62022970 Chenopodium quinoa HOM05D004784 ORTHO05D005762 3.0e-178 628.6 408 75.5
vmacro22539 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 5.1e-178 627.9 473 69.3
CDE02G4424 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 1.1e-177 626.7 408 75.7
Nn1g03473 Nelumbo nucifera HOM05D004784 ORTHO05D005762 1.5e-177 626.3 450 71.6
Ah.14g087950 Amaranthus hybridus HOM05D004784 ORTHO05D005762 9.6e-177 623.6 406 74.9
Sc24g0000220 Simmondsia chinensis HOM05D004784 ORTHO05D005762 1.6e-176 622.9 406 75.1
Sc05g0009310 Simmondsia chinensis HOM05D004784 ORTHO05D005762 2.1e-176 622.5 407 75.4
EL10Ac6g15683 Beta vulgaris HOM05D004784 ORTHO05D005762 1.2e-171 606.7 449 67.9
GSVIVG01012702001 Vitis vinifera HOM05D004784 ORTHO05D005762 1.2e-171 606.7 333 86.8
Gorai.009G179900 Gossypium raimondii HOM05D004784 ORTHO05D005762 2.3e-170 602.4 382 79.6
Nn030s41595 Nelumbo nucifera HOM05D004784 ORTHO05D005762 1.1e-169 600.1 379 78.9
Oeu040336.3 Olea europaea HOM05D004784 ORTHO05D005762 1.1e-169 600.1 517 62.5
BcaB03g13227 Brassica carinata HOM05D004784 ORTHO05D005762 1.9e-169 599.4 332 87.0
A08p33210 Brassica napus HOM05D004784 ORTHO05D005762 7.4e-169 597.4 410 75.6
Sabra04G0005000 Salix brachista HOM05D004784 ORTHO05D005762 2.6e-166 589.0 382 76.4
HPP92_004130 Vanilla planifolia HOM05D004784 ORTHO05D005762 1.3e-165 586.6 410 71.0
ATR0794G107 Amborella trichopoda HOM05D004784 ORTHO05D005762 3.6e-163 578.6 417 70.5
SEGI_27497 Sequoiadendron giganteum HOM05D004784 ORTHO05D005762 6.7e-162 574.3 409 69.4
Os04g0623800 Oryza sativa ssp. japonica HOM05D004784 ORTHO05D005762 3.1e-159 565.5 332 81.0
Zm00001eb070250 Zea mays HOM05D004784 ORTHO05D005762 1.3e-157 560.1 332 80.4
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 9.1e-151 537.3 412 64.3
AagrBONN_evm.TU.Sc2ySwM_344.1952 Anthoceros agrestis HOM05D004784 ORTHO05D005762 8.5e-149 530.8 329 76.3
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 1.9e-148 529.6 330 75.2
Mapoly0129s0024 Marchantia polymorpha HOM05D004784 ORTHO05D005762 7.4e-145 517.7 405 62.2
SMO352G0047 Selaginella moellendorffii HOM05D004784 ORTHO05D005762 4.2e-140 501.9 330 72.1
Actinidia26902 Actinidia chinensis HOM05D004784 ORTHO05D005762 1.2e-139 500.4 310 80.6
TAR627G1106 Trochodendron aralioides HOM05D004784 ORTHO05D005762 3.7e-136 488.8 317 75.7
A06p08340 Brassica napus HOM05D004784 ORTHO05D005762 5.7e-129 464.9 409 63.1
CSS0014504 Camellia sinensis var. sinensis HOM05D004784 ORTHO05D005762 1.0e-125 454.1 389 62.7
TAR626G0807 Trochodendron aralioides HOM05D004784 ORTHO05D005762 5.0e-125 451.8 251 85.7
PRCOL_00007041 Prasinoderma coloniale HOM05D004784 ORTHO05D005762 9.5e-116 421.0 334 63.5
Cre03.g193750 Chlamydomonas reinhardtii HOM05D004784 ORTHO05D005762 3.0e-114 416.0 332 60.2
Eucgr.E03909 Eucalyptus grandis HOM05D004784 ORTHO05D005762 3.5e-110 402.5 220 89.1
Cpa.g.sc152.29 Carica papaya HOM05D004784 ORTHO05D005762 2.6e-97 359.8 197 85.8
MCO15G045 Micromonas commoda HOM05D004784 ORTHO05D005762 3.7e-96 355.9 333 53.8
Atru.chr8.533 Acer truncatum HOM05D004784 ORTHO05D005762 6.0e-94 348.6 255 68.6
MD05G1348800 Malus domestica HOM05D004784 ORTHO05D005762 2.6e-89 333.2 238 72.7
Lalb_Chr20g0118761 Lupinus albus HOM05D004784 ORTHO05D005762 1.4e-87 327.4 227 72.7
BraA06t24032Z Brassica rapa HOM05D000911 ORTHO05D001266 3.2e-79 299.7 239 67.8
Cfa026602 Carpinus fangiana HOM05D004784 ORTHO05D005762 4.5e-73 279.3 389 41.9
CBR_g24348 Chara braunii HOM05D004784 ORTHO05D005762 1.7e-72 277.3 180 74.4
Sopen07g011340 Solanum pennellii HOM05D004784 ORTHO05D005762 1.1e-66 258.1 180 69.4
Haze_26660 Corylus avellana HOM05D004784 ORTHO05D005762 1.8e-61 240.7 339 42.8
EL10Ac1g01135 Beta vulgaris HOM05D004784 ORTHO05D005762 8.2e-59 231.9 141 77.3
EL10Ac2g03767 Beta vulgaris HOM05D004784 ORTHO05D005762 1.4e-58 231.1 140 77.9
Atru.chr8.531 Acer truncatum HOM05D004784 ORTHO05D005762 2.7e-54 216.9 124 80.6
Actinidia05506 Actinidia chinensis HOM05D004784 ORTHO05D005762 2.9e-48 196.8 104 91.3
Actinidia15969 Actinidia chinensis HOM05D004784 ORTHO05D058202 6.3e-19 99.4 128 45.3


User provided reference genes

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