Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1367 Erigeron canadensis HOM05D001969 ORTHO05D009003 1.6e-60 236.1 141 100.0
ECA233G3782 Erigeron canadensis HOM05D001969 ORTHO05D009003 2.4e-59 232.3 141 97.9
HanXRQChr09g0274351 Helianthus annuus HOM05D001969 ORTHO05D009003 1.2e-50 203.4 141 85.8
HanXRQChr11g0350221 Helianthus annuus HOM05D001969 ORTHO05D009003 7.6e-50 200.7 141 85.1
HanXRQChr06g0167021 Helianthus annuus HOM05D001969 ORTHO05D009003 2.9e-49 198.7 141 84.4
Lsat_1_v5_gn_3_137700 Lactuca sativa HOM05D001969 ORTHO05D009003 6.4e-49 197.6 141 77.3
Dinv23700 Davidia involucrata HOM05D001969 ORTHO05D009003 7.9e-39 164.1 133 75.9
Lsat_1_v5_gn_2_3941 Lactuca sativa HOM05D001969 ORTHO05D009003 2.3e-38 162.5 131 61.8
CSS0025708 Camellia sinensis var. sinensis HOM05D001969 ORTHO05D009003 3.3e-37 158.7 134 72.4
DCAR_011200 Daucus carota HOM05D001969 ORTHO05D009003 5.7e-37 157.9 129 55.8
Nitab4.5_0006575g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 8.2e-36 154.1 137 70.1
Cc11_g01780 Coffea canephora HOM05D001969 ORTHO05D009003 1.1e-35 153.7 137 70.8
Nitab4.5_0003069g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 1.4e-35 153.3 137 70.8
Solyc07g064840.3 Solanum lycopersicum HOM05D001969 ORTHO05D009003 1.4e-35 153.3 138 70.3
SalBow7G2523 Salvia bowleyana HOM05D001969 ORTHO05D009003 1.8e-35 152.9 141 68.8
MSTRG.23988 Avicennia marina HOM05D001969 ORTHO05D009003 2.4e-35 152.5 141 68.1
Sopen07g033040 Solanum pennellii HOM05D001969 ORTHO05D009003 2.4e-35 152.5 138 69.6
Actinidia39674 Actinidia chinensis HOM05D001969 ORTHO05D003463 3.1e-35 152.1 138 65.9
CANSAT78G0375 Cannabis sativa HOM05D001969 ORTHO05D003463 3.1e-35 152.1 137 69.3
PGSC0003DMG400022306 Solanum tuberosum HOM05D001969 ORTHO05D009003 5.3e-35 151.4 138 69.6
vmacro09267 Vaccinium macrocarpon HOM05D001969 ORTHO05D009003 5.3e-35 151.4 132 70.5
Actinidia39300 Actinidia chinensis HOM05D001969 ORTHO05D009003 9.0e-35 150.6 141 66.7
QL08p048209 Quercus lobata HOM05D001969 ORTHO05D009003 9.0e-35 150.6 137 68.6
SalBow1G0343 Salvia bowleyana HOM05D001969 ORTHO05D009003 9.0e-35 150.6 138 68.8
SalBow7G4035 Salvia bowleyana HOM05D001969 ORTHO05D009003 9.0e-35 150.6 138 68.8
SGA_v2.0_scaffold135G34841 Striga asiatica HOM05D001969 ORTHO05D009003 2.6e-34 149.1 137 67.2
SGA_v2.0_scaffold3G01553 Striga asiatica HOM05D001969 ORTHO05D009003 2.6e-34 149.1 130 71.5
Nn1g06730 Nelumbo nucifera HOM05D001969 ORTHO05D009003 5.9e-34 147.9 138 59.4
Peaxi162Scf00423g00066 Petunia axillaris HOM05D001969 ORTHO05D009003 7.6e-34 147.5 129 71.3
RcHm_v2.0_Chr2g0127151 Rosa chinensis HOM05D001969 ORTHO05D009003 7.6e-34 147.5 130 55.4
TAR629G1647 Trochodendron aralioides HOM05D001969 ORTHO05D009003 7.6e-34 147.5 138 65.9
Cc11_g01770 Coffea canephora HOM05D001969 ORTHO05D009003 1.3e-33 146.7 137 67.9
Nitab4.5_0002260g0270 Nicotiana tabacum HOM05D001969 ORTHO05D009003 1.7e-33 146.4 137 68.6
Oeu047331.1 Olea europaea HOM05D001969 ORTHO05D009003 1.7e-33 146.4 141 68.8
Rhsim04G0021700 Rhododendron simsii HOM05D001969 ORTHO05D009003 1.7e-33 146.4 132 70.5
CANSAT21G1059 Cannabis sativa HOM05D001969 ORTHO05D009003 2.2e-33 146.0 140 65.0
Lju41E32T0 Lonicera japonica HOM05D001969 ORTHO05D009003 2.2e-33 146.0 88 72.7
CAN.G1310.15 Capsicum annuum HOM05D001969 ORTHO05D009003 5.0e-33 144.8 137 68.6
Nitab4.5_0003358g0010 Nicotiana tabacum HOM05D001969 ORTHO05D009003 5.0e-33 144.8 137 67.2
Nn1g03931 Nelumbo nucifera HOM05D001969 ORTHO05D009003 8.5e-33 144.1 137 64.2
TAR627G0343 Trochodendron aralioides HOM05D001969 ORTHO05D009003 1.1e-32 143.7 137 66.4
TAR627G0582 Trochodendron aralioides HOM05D001969 ORTHO05D009003 1.1e-32 143.7 137 66.4
Migut.H00150 Erythranthe guttata HOM05D001969 ORTHO05D009003 1.4e-32 143.3 134 66.4
Aqoxy6G02660 Aquilegia oxysepala HOM05D001969 ORTHO05D009003 5.5e-32 141.4 137 66.4
CAN.G1720.5 Capsicum annuum HOM05D001969 ORTHO05D009003 2.1e-31 139.4 137 66.4
MD09G1092600 Malus domestica HOM05D001969 ORTHO05D009003 2.1e-31 139.4 141 66.0
MBI04_g38761_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 3.6e-31 138.7 137 66.4
Sed0009336 Sechium edule HOM05D001969 ORTHO05D009003 3.6e-31 138.7 138 67.4
ATR1001G005 Amborella trichopoda HOM05D001969 ORTHO05D009003 4.6e-31 138.3 138 62.3
Thecc.02G172900 Theobroma cacao HOM05D001969 ORTHO05D009003 4.6e-31 138.3 141 63.8
unitig_748.g8143 Utricularia gibba HOM05D001969 ORTHO05D009003 1.0e-30 137.1 141 62.4
COL.COLO4_13690 Corchorus olitorius HOM05D001969 ORTHO05D009003 1.3e-30 136.7 141 64.5
VMungo1127G0255 Vigna mungo HOM05D001969 ORTHO05D009003 1.8e-30 136.3 138 62.3
MBI06_g08467_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 3.0e-30 135.6 137 62.8
Atru.chr6.3054 Acer truncatum HOM05D001969 ORTHO05D009003 3.9e-30 135.2 137 64.2
Glyma.09G257600 Glycine max HOM05D001969 ORTHO05D009003 3.9e-30 135.2 138 60.9
Ciclev10017445m.g Citrus clementina HOM05D001969 ORTHO05D003463 6.7e-30 134.4 127 59.1
Glyma.18G235000 Glycine max HOM05D001969 ORTHO05D009003 6.7e-30 134.4 138 61.6
MD17G1082700 Malus domestica HOM05D001969 ORTHO05D009003 8.7e-30 134.0 131 68.7
Duzib248G0251 Durio zibethinus HOM05D001969 ORTHO05D009003 1.5e-29 133.3 141 63.1
EL10Ac3g05654 Beta vulgaris HOM05D001969 ORTHO05D003463 2.5e-29 132.5 131 66.4
AUR62029451 Chenopodium quinoa HOM05D001969 ORTHO05D009003 2.5e-29 132.5 130 61.5
Gohir.D02G182700 Gossypium hirsutum HOM05D001969 ORTHO05D009003 2.5e-29 132.5 141 62.4
Gohir.A03G159600 Gossypium hirsutum HOM05D001969 ORTHO05D009003 3.3e-29 132.1 141 63.1
Phvul.011G177800 Phaseolus vulgaris HOM05D001969 ORTHO05D009003 4.3e-29 131.7 138 59.4
Eucgr.K00935 Eucalyptus grandis HOM05D001969 ORTHO05D009003 5.7e-29 131.3 140 58.6
Cfa003704 Carpinus fangiana HOM05D001969 ORTHO05D009003 7.4e-29 131.0 129 66.7
Manes.13G150950 Manihot esculenta HOM05D001969 ORTHO05D009003 9.7e-29 130.6 92 65.2
Sed0013701 Sechium edule HOM05D001969 ORTHO05D009003 9.7e-29 130.6 92 63.0
Potri.013G145800 Populus trichocarpa HOM05D001969 ORTHO05D009003 1.3e-28 130.2 137 63.5
TWI18G1087 Tripterygium wilfordii HOM05D001969 ORTHO05D009003 1.3e-28 130.2 138 52.2
Lalb_Chr19g0135421 Lupinus albus HOM05D001969 ORTHO05D009003 2.2e-28 129.4 138 60.9
PGR142G0421 Punica granatum HOM05D001969 ORTHO05D003463 3.7e-28 128.6 127 65.4
SEGI_26592 Sequoiadendron giganteum HOM05D001969 ORTHO05D009003 8.2e-28 127.5 130 59.2
CiPaw.16G086600 Carya illinoinensis HOM05D001969 ORTHO05D009003 1.4e-27 126.7 138 63.8
GSVIVG01030575001 Vitis vinifera HOM05D001969 ORTHO05D009003 9.1e-27 124.0 116 69.8
TPR.G21647 Trifolium pratense HOM05D001969 ORTHO05D009003 2.6e-26 122.5 135 56.3
Lj3g0006045 Lotus japonicus HOM05D001969 ORTHO05D009003 3.4e-26 122.1 137 56.2
Ca_20693_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 4.5e-26 121.7 137 56.9
Ca_30106_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 4.5e-26 121.7 137 56.9
FAN05G0495 Fragaria x ananassa HOM05D001969 ORTHO05D003463 5.9e-26 121.3 82 59.8
CDE04G1317 Ceratophyllum demersum HOM05D004539 ORTHO05D009003 7.7e-26 120.9 121 65.3
Sc03g0002190 Simmondsia chinensis HOM05D001969 ORTHO05D009003 1.0e-25 120.6 137 50.4
Medtr4g065010 Medicago truncatula HOM05D001969 ORTHO05D009003 2.2e-25 119.4 130 58.5
Psat7g197120 Pisum sativum HOM05D001969 ORTHO05D009003 2.2e-25 119.4 133 56.4
Haze_15783 Corylus avellana HOM05D001969 ORTHO05D009003 6.5e-25 117.9 121 66.9
Medtr4g046043 Medicago truncatula HOM05D001969 ORTHO05D009003 8.5e-25 117.5 135 53.3
Lj2g0006312 Lotus japonicus HOM05D001969 ORTHO05D009003 2.5e-24 115.9 137 54.7
Gorai.005G205100 Gossypium raimondii HOM05D001969 ORTHO05D003463 1.2e-23 113.6 135 58.5
THA.LOC104811178 Tarenaya hassleriana HOM05D001969 ORTHO05D009003 1.2e-23 113.6 136 40.4
TPR.G31971 Trifolium pratense HOM05D001669 ORTHO05D006496 1.6e-23 113.2 85 51.8
CsaV3_6G012510 Cucumis sativus L. HOM05D001969 ORTHO05D003463 3.0e-22 109.0 112 66.1
HPP92_010084 Vanilla planifolia HOM05D001969 ORTHO05D009003 5.1e-22 108.2 130 57.7
HPP92_010093 Vanilla planifolia HOM05D001969 ORTHO05D009003 5.1e-22 108.2 130 57.7
Mapoly0071s0092 Marchantia polymorpha HOM05D001969 ORTHO05D009003 8.8e-22 107.5 140 50.7
Aa31LG9G15650 Aethionema arabicum HOM05D001969 ORTHO05D009003 1.1e-21 107.1 144 37.5
Zm00001eb414500 Zea mays HOM05D001969 ORTHO05D009003 2.0e-21 106.3 128 56.2
PSO384G2148 Papaver somniferum HOM05D001969 ORTHO05D009003 2.6e-21 105.9 124 53.2
Manes.06G013500 Manihot esculenta HOM05D001969 ORTHO05D009003 3.3e-21 105.5 107 47.7
Zm00001eb072880 Zea mays HOM05D001969 ORTHO05D009003 4.4e-21 105.1 126 56.3
Zm00001eb194600 Zea mays HOM05D001969 ORTHO05D009003 7.4e-21 104.4 128 55.5
Zm00001eb225500 Zea mays HOM05D001969 ORTHO05D009003 7.4e-21 104.4 128 55.5
Zm00001eb194610 Zea mays HOM05D001969 ORTHO05D009003 1.3e-20 103.6 128 54.7
PSO339G1404 Papaver somniferum HOM05D001969 ORTHO05D009003 1.7e-20 103.2 121 52.9
Os07g0530300 Oryza sativa ssp. japonica HOM05D001969 ORTHO05D009003 3.7e-20 102.1 128 54.7
Zm00001eb350110 Zea mays HOM05D001969 ORTHO05D009003 1.1e-19 100.5 128 53.9
Rhsim04G0065900 Rhododendron simsii HOM05D001969 ORTHO05D003463 2.4e-19 99.4 100 70.0
Cpa.g.sc17.168 Carica papaya HOM05D001969 ORTHO05D003463 4.1e-19 98.6 116 58.6
Pp3c6_17280 Physcomitrium patens HOM05D001969 ORTHO05D009003 4.1e-19 98.6 137 48.9
AL3G54010 Arabidopsis lyrata HOM05D001969 ORTHO05D009003 6.9e-19 97.8 135 41.5
FAN02G3777 Fragaria x ananassa HOM05D001969 ORTHO05D009003 1.5e-18 96.7 95 61.1
Ah.07g207260 Amaranthus hybridus HOM05D001969 ORTHO05D003463 1.3e-17 93.6 116 48.3
Hma1.2p1_0832F.1_g225700 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 2.2e-17 92.8 136 52.2
SMO351G0323 Selaginella moellendorffii HOM05D001969 ORTHO05D009003 1.4e-16 90.1 129 50.4
PSO017G7338 Papaver somniferum HOM05D001969 ORTHO05D009003 7.2e-16 87.8 128 48.4
PSO675G3991 Papaver somniferum HOM05D001969 ORTHO05D009003 1.0e-14 84.0 97 43.3
Eucgr.K00932 Eucalyptus grandis HOM05D001969 ORTHO05D009003 1.5e-13 80.1 62 56.5
BcaC07g41194 Brassica carinata HOM05D001969 ORTHO05D003463 2.6e-13 79.3 119 33.6
C08p42010 Brassica napus HOM05D001969 ORTHO05D003463 2.6e-13 79.3 119 33.6
BolC8t51763H Brassica oleracea HOM05D001969 ORTHO05D003463 2.6e-13 79.3 119 33.6
Thhalv10001991m.g Eutrema salsugineum HOM05D001969 ORTHO05D003463 2.6e-13 79.3 122 32.8
Zm00001eb414510 Zea mays HOM05D001969 ORTHO05D009003 4.4e-13 78.6 60 58.3
Aa31LG8G17650 Aethionema arabicum HOM05D001969 ORTHO05D003463 1.7e-12 76.6 108 32.4
A09p58710 Brassica napus HOM05D001969 ORTHO05D003463 1.7e-12 76.6 119 31.9
BraA09t41257Z Brassica rapa HOM05D001969 ORTHO05D003463 1.7e-12 76.6 119 31.9
MCO02G305 Micromonas commoda HOM05D001969 ORTHO05D009003 1.7e-12 76.6 123 45.5
BcaB08g34941 Brassica carinata HOM05D001969 ORTHO05D003463 2.8e-12 75.9 122 30.3
Hma1.2p1_0384F.1_g141150 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 1.0e-09 67.4 73 42.5
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 1.0e-09 67.4 93 48.4
Cre02.g075550 Chlamydomonas reinhardtii HOM05D001969 ORTHO05D009003 1.3e-09 67.0 137 37.2
SEGI_38009 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 6.7e-06 54.7 66 43.9


User provided reference genes

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