Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 7.3e-270 933.3 478 100.0
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 4.4e-198 694.9 458 80.6
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 9.1e-196 687.2 484 76.2
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 2.3e-191 672.5 451 78.0
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 6.8e-167 591.3 422 69.7
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 9.2e-164 580.9 487 62.2
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 1.4e-159 567.0 415 69.2
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 4.0e-159 565.5 486 61.5
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 2.6e-158 562.8 445 65.4
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 4.1e-156 555.4 417 65.9
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 7.0e-156 554.7 447 63.8
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 4.6e-155 552.0 452 62.4
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 7.8e-155 551.2 475 60.8
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 3.0e-154 549.3 448 62.5
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 5.0e-154 548.5 487 58.9
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 1.5e-153 547.0 488 59.6
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 9.5e-153 544.3 418 64.4
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.2e-152 543.9 459 60.6
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 1.6e-152 543.5 419 64.7
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.6e-152 543.5 445 63.4
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 2.1e-152 543.1 415 66.0
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 4.7e-152 542.0 423 65.7
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 3.1e-151 539.3 415 65.5
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 1.5e-150 537.0 419 64.0
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.5e-150 537.0 484 58.1
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 4.4e-150 535.4 463 60.7
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 5.8e-150 535.0 484 58.3
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 2.2e-149 533.1 487 56.9
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 4.9e-149 531.9 422 63.3
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 8.3e-149 531.2 413 63.9
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 8.3e-149 531.2 417 64.3
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 1.1e-148 530.8 417 63.1
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 1.4e-148 530.4 408 65.2
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 1.9e-148 530.0 479 57.6
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 3.2e-148 529.3 408 65.2
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 5.4e-148 528.5 444 61.3
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 7.1e-148 528.1 445 59.8
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 9.2e-148 527.7 479 58.2
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 1.6e-147 526.9 406 64.8
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 1.6e-147 526.9 460 58.9
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 4.6e-147 525.4 414 63.8
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 4.6e-147 525.4 416 62.5
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 6.0e-147 525.0 483 58.2
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 7.8e-147 524.6 436 61.2
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.0e-146 524.2 425 60.7
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 1.0e-146 524.2 486 57.0
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 1.3e-146 523.9 478 58.4
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 3.9e-146 522.3 459 59.0
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 3.9e-146 522.3 486 57.0
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 5.1e-146 521.9 425 60.2
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 5.1e-146 521.9 486 56.4
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.5e-145 520.4 451 59.2
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.9e-145 520.0 485 56.9
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 2.5e-145 519.6 459 58.8
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 3.3e-145 519.2 416 62.3
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 4.3e-145 518.8 417 61.4
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 2.8e-144 516.2 486 56.6
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 3.6e-144 515.8 428 61.7
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 3.6e-144 515.8 448 58.9
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 6.2e-144 515.0 417 62.4
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 8.1e-144 514.6 461 57.0
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 1.4e-143 513.8 516 55.2
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 3.1e-143 512.7 486 56.2
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 5.2e-143 511.9 401 64.1
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.2e-142 510.8 418 60.3
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 2.6e-142 509.6 443 58.2
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 5.8e-142 508.4 482 56.2
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 9.9e-142 507.7 412 62.1
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 9.9e-142 507.7 478 56.3
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 3.7e-141 505.8 470 56.6
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 8.4e-141 504.6 417 59.7
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 4.1e-140 502.3 385 63.1
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 5.4e-140 501.9 466 56.2
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 7.1e-140 501.5 474 57.8
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 9.2e-140 501.1 445 56.9
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.9e-137 493.4 412 58.0
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 1.6e-136 490.3 418 58.4
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 1.4e-132 477.2 421 57.2
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 3.2e-132 476.1 415 58.1
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 7.1e-132 474.9 462 56.5
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 1.2e-131 474.2 455 56.3
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 1.6e-131 473.8 470 53.2
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 3.0e-130 469.5 495 53.7
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 1.5e-129 467.2 415 57.8
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 1.9e-129 466.8 407 58.7
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 2.1e-128 463.4 416 55.5
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 2.8e-128 463.0 496 50.4
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 6.2e-128 461.8 369 61.2
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 6.9e-127 458.4 419 53.7
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 6.4e-125 451.8 365 62.5
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 2.8e-120 436.4 483 50.9
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 6.4e-117 425.2 360 56.9
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 3.5e-115 419.5 360 57.5
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 3.4e-110 402.9 310 64.8
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 8.7e-106 388.3 277 69.7
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.1e-105 387.9 464 47.8
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 2.1e-104 383.6 465 43.7
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.9e-100 370.5 412 48.1
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 1.2e-99 367.9 427 43.8
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 4.6e-99 365.9 413 47.9
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 3.2e-92 343.2 397 45.3
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 3.7e-88 329.7 424 41.3
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 8.5e-85 318.5 222 69.4
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.6e-81 307.0 291 51.9
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 4.4e-81 306.2 357 47.9
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 1.1e-71 275.0 267 55.1
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 3.7e-64 250.0 227 57.3
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 8.3e-64 248.8 292 48.3
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 5.9e-54 216.1 230 49.6
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 3.8e-53 213.4 446 32.3
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 4.0e-42 176.8 449 31.6
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 2.4e-39 167.5 130 63.8
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 2.6e-33 147.5 102 64.7
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 7.1e-31 139.4 100 62.0
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 9.2e-31 139.0 117 59.0
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 3.5e-30 137.1 118 61.0
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 8.6e-29 132.5 97 58.8
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.2e-25 122.1 409 26.7
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 9.2e-23 112.5 64 79.7
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.6e-22 111.7 87 62.1
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 5.4e-15 86.7 69 58.0
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 9.3e-15 85.9 90 44.4
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 2.8e-11 74.3 56 67.9
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 4.8e-11 73.6 68 52.9
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.2e-09 68.9 50 66.0
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 4.5e-09 67.0 105 47.6
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 7.9e-06 56.2 435 22.1


User provided reference genes

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