Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G4226 Erigeron canadensis HOM05D005650 ORTHO05D007020 1.1e-292 1009.2 511 100.0
HanXRQChr17g0565991 Helianthus annuus HOM05D005650 ORTHO05D007020 5.8e-257 890.6 511 88.8
Lsat_1_v5_gn_4_23420 Lactuca sativa HOM05D005650 ORTHO05D007020 5.8e-249 864.0 526 84.8
CSS0031782 Camellia sinensis var. sinensis HOM05D005650 ORTHO05D007020 5.6e-228 794.3 520 76.2
Dinv26372 Davidia involucrata HOM05D005650 ORTHO05D007020 1.7e-224 782.7 520 74.6
Cfa015047 Carpinus fangiana HOM05D005650 ORTHO05D007020 5.3e-218 761.1 520 73.7
MD13G1018100 Malus domestica HOM05D005650 ORTHO05D007020 1.5e-217 759.6 516 74.2
Actinidia12402 Actinidia chinensis HOM05D005650 ORTHO05D007020 1.7e-216 756.1 533 72.6
TAR622G0850 Trochodendron aralioides HOM05D005650 ORTHO05D007020 5.0e-216 754.6 521 72.9
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla HOM05D005650 ORTHO05D007020 1.1e-215 753.4 516 72.7
Solyc02g062110.4 Solanum lycopersicum HOM05D005650 ORTHO05D007020 1.9e-215 752.7 517 73.5
Nitab4.5_0002337g0070 Nicotiana tabacum HOM05D005650 ORTHO05D007020 3.2e-215 751.9 530 72.1
Prupe.7G053000 Prunus persica HOM05D005650 ORTHO05D007020 4.2e-215 751.5 519 72.8
Sopen02g013060 Solanum pennellii HOM05D005650 ORTHO05D007020 5.5e-215 751.1 517 73.3
Ciclev10014948m.g Citrus clementina HOM05D005650 ORTHO05D007020 1.2e-214 750.0 520 72.5
Haze_10848 Corylus avellana HOM05D005650 ORTHO05D007020 1.2e-214 750.0 533 71.7
DCAR_023564 Daucus carota HOM05D005650 ORTHO05D007020 1.2e-214 750.0 521 72.0
Atru.chr11.825 Acer truncatum HOM05D005650 ORTHO05D007020 1.6e-214 749.6 533 70.9
GSVIVG01011626001 Vitis vinifera HOM05D005650 ORTHO05D007020 7.9e-214 747.3 533 71.1
Potri.008G137000 Populus trichocarpa HOM05D005650 ORTHO05D007020 1.3e-213 746.5 519 71.5
Nn8g41275 Nelumbo nucifera HOM05D005650 ORTHO05D007020 1.8e-213 746.1 522 71.6
MD16G1016000 Malus domestica HOM05D005650 ORTHO05D007020 5.1e-213 744.6 519 72.3
Thecc.02G307700 Theobroma cacao HOM05D005650 ORTHO05D007020 5.1e-213 744.6 533 71.1
Aqoxy2G00265 Aquilegia oxysepala HOM05D005650 ORTHO05D007020 6.7e-213 744.2 519 72.3
QL03p037983 Quercus lobata HOM05D005650 ORTHO05D007020 6.7e-213 744.2 520 71.9
CAN.G1206.2 Capsicum annuum HOM05D005650 ORTHO05D007020 1.5e-212 743.0 517 72.7
Glyma.05G240900 Glycine max HOM05D005650 ORTHO05D007020 1.6e-211 739.6 505 72.3
Gohir.D02G136500 Gossypium hirsutum HOM05D005650 ORTHO05D007020 2.2e-211 739.2 533 70.9
Gorai.005G152600 Gossypium raimondii HOM05D005650 ORTHO05D007020 2.2e-211 739.2 533 70.9
RcHm_v2.0_Chr4g0442431 Rosa chinensis HOM05D005650 ORTHO05D007020 3.7e-211 738.4 519 71.1
Gohir.A03G112000 Gossypium hirsutum HOM05D005650 ORTHO05D007020 1.1e-210 736.9 520 71.5
Rhsim09G0087900 Rhododendron simsii HOM05D005650 ORTHO05D007020 1.1e-210 736.9 510 72.9
Manes.15G123300 Manihot esculenta HOM05D005650 ORTHO05D007020 2.4e-210 735.7 520 71.0
Phvul.011G008500 Phaseolus vulgaris HOM05D005650 ORTHO05D007020 3.1e-210 735.3 510 71.6
FvH4_4g33280 Fragaria vesca HOM05D005650 ORTHO05D007020 9.0e-210 733.8 519 71.3
Psat4g004560 Pisum sativum HOM05D005650 ORTHO05D007020 2.6e-209 732.3 520 70.8
Duzib248G0273 Durio zibethinus HOM05D005650 ORTHO05D007020 5.9e-209 731.1 508 72.0
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea HOM05D005650 ORTHO05D007020 1.1e-207 726.9 533 68.3
Glyma.08G047900 Glycine max HOM05D005650 ORTHO05D007020 1.9e-207 726.1 531 68.9
Duzib251G0272 Durio zibethinus HOM05D005650 ORTHO05D007020 2.5e-207 725.7 534 69.3
CiPaw.06G055300 Carya illinoinensis HOM05D005650 ORTHO05D007020 9.4e-207 723.8 520 70.0
Eucgr.B02693 Eucalyptus grandis HOM05D005650 ORTHO05D007020 4.6e-206 721.5 532 69.2
Lj4g0026003 Lotus japonicus HOM05D005650 ORTHO05D007020 7.9e-206 720.7 520 69.8
VMungo1127G0110 Vigna mungo HOM05D005650 ORTHO05D007020 1.8e-205 719.5 500 71.4
MSTRG.23341 Avicennia marina HOM05D005650 ORTHO05D007020 3.9e-205 718.4 512 70.1
Sabra08G0104500 Salix brachista HOM05D005650 ORTHO05D007020 6.7e-205 717.6 557 65.5
Medtr8g105900 Medicago truncatula HOM05D005650 ORTHO05D007020 2.6e-204 715.7 533 67.9
CsaV3_5G014540 Cucumis sativus L. HOM05D005650 ORTHO05D007020 1.3e-203 713.4 511 70.8
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea HOM05D005650 ORTHO05D007020 3.7e-203 711.8 563 64.3
PSO063G5777 Papaver somniferum HOM05D005650 ORTHO05D007020 4.8e-203 711.4 521 68.7
Lj6C735G0 Lonicera japonica HOM05D005650 ORTHO05D007020 8.2e-203 710.7 552 67.8
PSO782G4204 Papaver somniferum HOM05D005650 ORTHO05D007020 1.1e-202 710.3 521 68.5
Sed0001111 Sechium edule HOM05D005650 ORTHO05D007020 1.1e-202 710.3 511 70.6
SGA_v2.0_scaffold111G31522 Striga asiatica HOM05D005650 ORTHO05D007020 1.8e-202 709.5 539 67.0
TWI74G1652 Tripterygium wilfordii HOM05D005650 ORTHO05D007020 2.4e-202 709.1 535 67.9
CANSAT78G2020 Cannabis sativa HOM05D005650 ORTHO05D007020 2.6e-201 705.7 535 68.2
Cc11_g06590 Coffea canephora HOM05D005650 ORTHO05D007020 4.5e-201 704.9 534 67.6
VMungo0251G0664 Vigna mungo HOM05D005650 ORTHO05D007020 1.0e-200 703.7 500 70.4
AUR62036082 Chenopodium quinoa HOM05D005650 ORTHO05D007020 5.0e-200 701.4 517 66.9
Sc14g0006580 Simmondsia chinensis HOM05D005650 ORTHO05D007020 5.5e-199 698.0 520 68.7
AUR62035393 Chenopodium quinoa HOM05D005650 ORTHO05D007020 5.2e-197 691.4 517 66.9
Hund07852 Selenicereus undatus HOM05D005650 ORTHO05D007020 4.4e-196 688.3 520 67.9
Dinv01894 Davidia involucrata HOM05D005650 ORTHO05D007020 1.1e-194 683.7 487 70.8
SalBow3G3602 Salvia bowleyana HOM05D005650 ORTHO05D007020 1.1e-194 683.7 536 64.7
Cpa.g.sc362.1 Carica papaya HOM05D005650 ORTHO05D007020 4.1e-194 681.8 460 74.8
Nitab4.5_0000188g0130 Nicotiana tabacum HOM05D005650 ORTHO05D007020 1.2e-193 680.2 522 67.6
AT1G80910 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 1.6e-190 669.8 515 66.2
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 8.0e-190 667.5 500 67.2
Carub.0002s2663 Capsella rubella HOM05D005650 ORTHO05D007020 8.0e-190 667.5 515 65.8
FAN07G2273 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.2e-188 663.7 508 66.7
Aa31LG7G600 Aethionema arabicum HOM05D005650 ORTHO05D007020 1.5e-188 663.3 497 67.0
AL2G40470 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 1.5e-188 663.3 515 65.8
C06p29600 Brassica napus HOM05D005650 ORTHO05D007020 3.3e-188 662.1 515 65.4
CARHR073550 Cardamine hirsuta HOM05D005650 ORTHO05D007020 3.3e-188 662.1 515 66.0
Lalb_Chr14g0362121 Lupinus albus HOM05D005650 ORTHO05D007020 4.4e-188 661.8 516 63.8
BcaC08g45346 Brassica carinata HOM05D005650 ORTHO05D007020 9.7e-188 660.6 515 65.2
BraA07t30337Z Brassica rapa HOM05D005650 ORTHO05D007020 3.7e-187 658.7 534 64.0
Sp5g34830 Schrenkiella parvula HOM05D005650 ORTHO05D007020 3.7e-187 658.7 515 65.4
Thhalv10018445m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 4.1e-186 655.2 515 65.2
FAN17G2396 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.6e-185 653.3 508 65.9
Thhalv10007433m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 2.7e-185 652.5 505 65.0
unitig_21.g20969 Utricularia gibba HOM05D005650 ORTHO05D007020 1.7e-184 649.8 518 63.1
ATR0021G018 Amborella trichopoda HOM05D005650 ORTHO05D007020 2.2e-184 649.4 515 64.5
AT1G16020 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 8.5e-184 647.5 518 63.7
TPR.G19250 Trifolium pratense HOM05D005650 ORTHO05D007020 8.5e-184 647.5 511 65.2
BolC6t38125H Brassica oleracea HOM05D005650 ORTHO05D007020 1.1e-183 647.1 535 62.8
A07p26920 Brassica napus HOM05D005650 ORTHO05D007020 2.5e-183 646.0 490 66.9
AL1G28180 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 3.6e-182 642.1 518 63.3
Aa31LG4G1220 Aethionema arabicum HOM05D005650 ORTHO05D007020 1.8e-181 639.8 506 65.4
CARHR016520 Cardamine hirsuta HOM05D005650 ORTHO05D007020 4.0e-181 638.6 505 63.6
Sp1g14330 Schrenkiella parvula HOM05D005650 ORTHO05D007020 1.5e-180 636.7 511 64.0
THA.LOC104814015 Tarenaya hassleriana HOM05D005650 ORTHO05D007020 2.6e-180 636.0 534 62.4
Peaxi162Scf00439g00528 Petunia axillaris HOM05D005650 ORTHO05D007020 1.8e-178 629.8 517 63.8
Carub.0001s1582 Capsella rubella HOM05D005650 ORTHO05D007020 7.0e-178 627.9 505 62.4
BraA09t41479Z Brassica rapa HOM05D005650 ORTHO05D007020 5.9e-177 624.8 511 62.4
A09p61060 Brassica napus HOM05D005650 ORTHO05D007020 5.0e-176 621.7 511 62.2
Os08g0427300 Oryza sativa ssp. japonica HOM05D005650 ORTHO05D007020 5.0e-176 621.7 511 62.4
C08p44650 Brassica napus HOM05D005650 ORTHO05D007020 6.5e-176 621.3 513 62.4
BolC8t52011H Brassica oleracea HOM05D005650 ORTHO05D007020 1.9e-175 619.8 513 62.6
Migut.H02363 Erythranthe guttata HOM05D005650 ORTHO05D007020 2.1e-174 616.3 512 64.8
Ah.01g015510 Amaranthus hybridus HOM05D005650 ORTHO05D007020 5.7e-172 608.2 527 60.9
Zm00001eb179310 Zea mays HOM05D005650 ORTHO05D007020 7.5e-172 607.8 511 61.1
CiPaw.05G158000 Carya illinoinensis HOM05D005650 ORTHO05D007020 9.8e-172 607.4 437 70.0
BcaB03g14509 Brassica carinata HOM05D005650 ORTHO05D007020 3.8e-168 595.5 499 61.5
SEGI_01999 Sequoiadendron giganteum HOM05D005650 ORTHO05D007020 7.3e-167 591.3 515 58.6
PGR004G1106 Punica granatum HOM05D005650 ORTHO05D007020 1.6e-166 590.1 448 68.5
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 8.3e-163 577.8 438 68.0
CDE05G1068 Ceratophyllum demersum HOM05D005650 ORTHO05D007020 5.2e-157 558.5 446 64.3
SHI04292 Sapria himalayana HOM05D005650 ORTHO05D007020 8.3e-155 551.2 489 58.1
COL.COLO4_27613 Corchorus olitorius HOM05D005650 ORTHO05D007020 1.1e-138 497.7 356 70.8
Sed0000862 Sechium edule HOM05D005650 ORTHO05D007020 1.6e-134 483.8 450 59.6
Pp3c16_7940 Physcomitrium patens HOM05D005650 ORTHO05D007020 1.3e-128 464.2 513 47.4
Mapoly0059s0063 Marchantia polymorpha HOM05D005650 ORTHO05D007020 2.9e-123 446.4 530 47.9
HPP92_009689 Vanilla planifolia HOM05D005650 ORTHO05D007020 1.1e-122 444.5 392 58.7
SMO146G0258 Selaginella moellendorffii HOM05D005650 ORTHO05D007020 1.4e-117 427.6 497 45.9
EL10Ac9g20842 Beta vulgaris HOM05D005650 ORTHO05D007020 1.5e-111 407.5 392 55.4
Oeu059514.1 Olea europaea HOM05D005650 ORTHO05D007020 6.7e-104 382.1 466 48.3
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis HOM05D005650 ORTHO05D007020 1.5e-100 370.9 473 45.2
Dinv00920 Davidia involucrata HOM05D005650 ORTHO05D007020 2.3e-59 234.2 139 80.6
DCAR_023531 Daucus carota HOM05D005650 ORTHO05D007020 2.3e-56 224.2 434 37.8
Oeu036123.1 Olea europaea HOM05D005650 ORTHO05D007020 7.8e-44 182.6 124 71.0
C06p32880 Brassica napus HOM05D005650 ORTHO05D007020 5.6e-34 149.8 137 59.1
Lsat_1_v5_gn_2_121941 Lactuca sativa HOM05D005650 ORTHO05D007020 2.2e-30 137.9 78 87.2
C05p23900 Brassica napus HOM05D005650 ORTHO05D007020 4.1e-29 133.7 260 35.4
Lsat_1_v5_gn_7_69840 Lactuca sativa HOM05D005650 ORTHO05D007020 7.8e-28 129.4 73 86.3
CiPaw.05G157900 Carya illinoinensis HOM05D005650 ORTHO05D007020 7.3e-26 122.9 79 73.4
Lsat_1_v5_gn_1_123601 Lactuca sativa HOM05D005650 ORTHO05D007020 3.1e-24 117.5 99 61.6
CBR_g31091 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-23 114.8 143 39.9
C06p32890 Brassica napus HOM05D005650 ORTHO05D007020 1.3e-22 112.1 149 45.0
MELO3C019077.2 Cucumis melo HOM05D005650 ORTHO05D007020 3.5e-20 104.0 72 70.8
Cre07.g327000 Chlamydomonas reinhardtii HOM05D005650 ORTHO05D007020 2.9e-14 84.3 248 28.2
CBR_g31097 Chara braunii HOM05D000019 ORTHO05D000048 3.6e-09 67.4 53 52.8
MCO11G935 Micromonas commoda HOM05D005650 ORTHO05D007020 8.1e-09 66.2 151 33.1
BolC6t38409H Brassica oleracea HOM05D005650 ORTHO05D007020 9.0e-08 62.8 79 50.6
C06p53600 Brassica napus HOM05D005650 ORTHO05D040396 1.5e-07 62.0 46 67.4
AagrBONN_evm.TU.Sc2ySwM_340.525 Anthoceros agrestis HOM05D005650 ORTHO05D007020 8.4e-06 56.2 43 53.5


User provided reference genes

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