Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 2.3e-162 575.5 290 100.0
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 2.4e-122 442.6 293 78.5
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 1.6e-118 429.9 285 76.8
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 1.1e-95 354.0 327 59.9
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 1.6e-94 350.1 307 61.9
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 6.3e-91 338.2 328 58.2
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 1.8e-90 336.7 321 57.0
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 3.1e-90 335.9 314 57.3
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 4.1e-90 335.5 324 56.5
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 5.3e-90 335.1 322 56.5
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 2.0e-89 333.2 322 56.2
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 1.0e-88 330.9 315 58.1
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 1.0e-88 330.9 329 57.1
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.7e-88 330.1 323 55.4
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 3.8e-88 328.9 331 55.9
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 5.0e-88 328.6 324 57.1
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 6.5e-88 328.2 327 55.0
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 6.5e-88 328.2 323 55.1
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 1.9e-87 326.6 319 55.8
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 3.2e-87 325.9 314 57.0
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 2.1e-86 323.2 313 55.9
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 4.7e-86 322.0 311 55.0
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 6.1e-86 321.6 316 56.6
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 1.0e-85 320.9 313 55.9
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 1.4e-85 320.5 313 55.9
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 3.9e-85 318.9 316 56.3
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 1.1e-84 317.4 331 53.2
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 3.3e-84 315.8 322 54.7
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 5.7e-84 315.1 310 57.7
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 5.7e-84 315.1 315 56.2
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 7.4e-84 314.7 313 54.0
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 1.7e-83 313.5 315 56.2
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 1.7e-83 313.5 313 54.0
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 2.2e-83 313.2 311 58.2
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 3.7e-83 312.4 313 58.1
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 8.2e-83 311.2 326 53.7
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 1.4e-82 310.5 314 56.4
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 2.4e-82 309.7 316 56.6
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 5.3e-82 308.5 326 54.0
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 7.0e-82 308.1 320 55.6
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 1.6e-81 307.0 319 56.1
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 1.6e-81 307.0 292 58.2
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 2.0e-81 306.6 312 52.9
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 2.0e-81 306.6 289 56.4
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 4.5e-81 305.4 330 51.2
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 4.5e-81 305.4 317 54.6
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 1.0e-80 304.3 321 52.3
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 1.3e-80 303.9 297 56.9
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 1.7e-80 303.5 312 54.8
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 5.0e-80 302.0 309 56.6
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 6.5e-80 301.6 308 55.5
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 1.5e-79 300.4 315 55.6
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 1.9e-79 300.1 310 55.5
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 4.2e-79 298.9 327 54.1
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 4.2e-79 298.9 295 54.9
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 4.2e-79 298.9 325 52.6
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 2.1e-78 296.6 316 54.1
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 8.0e-78 294.7 313 54.3
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 8.0e-78 294.7 308 55.5
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 1.0e-77 294.3 333 51.7
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 1.8e-77 293.5 308 54.9
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.8e-77 293.5 308 54.9
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 6.7e-77 291.6 306 55.6
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 8.8e-77 291.2 327 51.1
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 8.8e-77 291.2 327 51.1
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 1.2e-76 290.8 297 54.9
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 1.2e-76 290.8 296 54.4
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.5e-76 290.4 308 54.5
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 4.4e-76 288.9 320 50.6
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 5.7e-76 288.5 324 52.5
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 7.5e-76 288.1 308 53.6
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 3.7e-75 285.8 290 54.5
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.4e-74 283.9 320 52.5
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 1.8e-74 283.5 297 53.5
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 3.1e-74 282.7 320 52.2
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 7.0e-74 281.6 290 55.2
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 1.2e-73 280.8 299 52.5
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 2.7e-73 279.6 324 49.4
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 5.9e-73 278.5 318 50.3
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 2.5e-71 273.1 293 52.9
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 2.5e-71 273.1 308 50.6
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 1.2e-70 270.8 289 52.9
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 1.2e-70 270.8 289 52.9
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 2.1e-70 270.0 291 52.9
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 3.6e-70 269.2 365 46.3
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 8.0e-70 268.1 328 49.7
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 1.0e-69 267.7 328 50.9
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 9.8e-68 261.2 296 52.0
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 1.3e-67 260.8 334 48.2
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 2.2e-67 260.0 330 47.0
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 8.3e-67 258.1 318 46.5
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 2.4e-66 256.5 309 51.8
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 5.9e-65 251.9 318 50.0
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 2.9e-64 249.6 292 53.1
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 3.8e-64 249.2 408 41.2
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 5.0e-64 248.8 312 47.8
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 8.5e-64 248.1 316 47.5
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 1.9e-63 246.9 273 49.1
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 5.5e-63 245.4 309 49.2
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 5.5e-63 245.4 307 47.2
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 3.7e-59 232.6 140 75.7
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 9.8e-52 208.0 297 41.8
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 1.3e-51 207.6 321 41.4
Pp3c3_280 Physcomitrium patens HOM05D006355 ORTHO05D008284 3.3e-47 193.0 308 43.2
SMO200G0211 Selaginella moellendorffii HOM05D006355 ORTHO05D008284 3.7e-43 179.5 293 37.9
CBR_g39727 Chara braunii HOM05D006355 ORTHO05D008284 5.4e-42 175.6 126 65.9
Mapoly0108s0017 Marchantia polymorpha HOM05D006355 ORTHO05D008284 1.9e-39 167.2 270 40.7
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 1.7e-35 154.1 338 33.7
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 2.4e-34 150.2 324 34.3
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 4.1e-34 149.4 304 38.8
AagrBONN_evm.TU.Sc2ySwM_228.3887 Anthoceros agrestis HOM05D006355 ORTHO05D008284 9.2e-34 148.3 288 35.1
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 3.5e-33 146.4 200 42.0
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 7.3e-31 138.7 227 36.1
Cre17.g701050 Chlamydomonas reinhardtii HOM05D006355 ORTHO05D008284 5.2e-29 132.5 139 48.9
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 1.5e-28 131.0 262 40.5
PRCOL_00003845 Prasinoderma coloniale HOM05D006355 ORTHO05D008284 1.6e-25 120.9 138 44.2
MCO07G733 Micromonas commoda HOM05D006355 ORTHO05D008284 8.6e-24 115.2 138 43.5
Migut.B00896 Erythranthe guttata HOM05D002142 ORTHO05D001189 1.1e-21 108.2 150 47.3
Aqoxy7G02122 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 1.7e-19 100.9 205 37.6
SHI23456 Sapria himalayana HOM05D006355 ORTHO05D008284 3.8e-19 99.8 57 66.7
SHI30666 Sapria himalayana HOM05D006355 ORTHO05D008284 4.9e-19 99.4 57 66.7
Aqoxy4G01928 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 7.1e-18 95.5 205 36.6
SHI30664 Sapria himalayana HOM05D006355 ORTHO05D008284 1.2e-17 94.7 151 41.7
Actinidia25232 Actinidia chinensis HOM05D006355 ORTHO05D008284 3.0e-08 63.5 110 41.8
Os01g0583300 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D300111 3.3e-07 60.1 42 66.7
GSVIVG01008148001 Vitis vinifera HOM05D006355 ORTHO05D000948 7.4e-07 58.9 105 39.0


User provided reference genes

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