Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G2647 Erigeron canadensis HOM05D006521 ORTHO05D008087 1.1e-212 743.0 373 100.0
Lsat_1_v5_gn_4_21220 Lactuca sativa HOM05D006521 ORTHO05D008087 2.3e-178 629.0 378 83.3
HanXRQChr16g0527921 Helianthus annuus HOM05D006521 ORTHO05D008087 8.7e-178 627.1 372 84.4
Lsat_1_v5_gn_2_67800 Lactuca sativa HOM05D006521 ORTHO05D008087 3.0e-154 548.9 340 79.1
HanXRQChr15g0471711 Helianthus annuus HOM05D006521 ORTHO05D008087 4.2e-148 528.5 339 77.0
Dinv00937 Davidia involucrata HOM05D006521 ORTHO05D008087 2.3e-146 522.7 363 70.8
Dinv16313 Davidia involucrata HOM05D006521 ORTHO05D008087 4.4e-145 518.5 363 70.2
Hma1.2p1_0011F.1_g007170 Hydrangea macrophylla HOM05D006521 ORTHO05D008087 1.2e-142 510.4 363 70.0
TAR376G0467 Trochodendron aralioides HOM05D006521 ORTHO05D008087 1.8e-135 486.5 378 65.9
Manes.12G138400 Manihot esculenta HOM05D006521 ORTHO05D008087 9.1e-135 484.2 368 67.7
Aqoxy5G01962 Aquilegia oxysepala HOM05D006521 ORTHO05D008087 5.9e-134 481.5 366 66.9
PSO447G0171 Papaver somniferum HOM05D006521 ORTHO05D008087 1.0e-133 480.7 375 64.3
Prupe.3G102100 Prunus persica HOM05D006521 ORTHO05D008087 6.5e-133 478.0 361 67.9
PSO210G2459 Papaver somniferum HOM05D006521 ORTHO05D008087 2.5e-132 476.1 375 63.5
FAN28G0591 Fragaria x ananassa HOM05D006521 ORTHO05D008087 5.5e-132 474.9 359 68.2
RcHm_v2.0_Chr2g0115391 Rosa chinensis HOM05D006521 ORTHO05D008087 4.7e-131 471.9 359 66.3
FvH4_1g21530 Fragaria vesca HOM05D006521 ORTHO05D008087 2.3e-130 469.5 358 67.6
Thecc.01G106200 Theobroma cacao HOM05D006521 ORTHO05D008087 3.0e-130 469.2 359 66.3
FAN19G2752 Fragaria x ananassa HOM05D006521 ORTHO05D008087 5.2e-130 468.4 358 67.3
Oeu053565.1 Olea europaea HOM05D006521 ORTHO05D008087 6.8e-130 468.0 374 64.4
MELO3C007776.2 Cucumis melo HOM05D006521 ORTHO05D008087 1.2e-129 467.2 363 65.3
CANSAT01G1058 Cannabis sativa HOM05D006521 ORTHO05D008087 2.0e-129 466.5 368 64.9
Lalb_Chr11g0075241 Lupinus albus HOM05D006521 ORTHO05D008087 2.0e-129 466.5 358 66.2
FAN23G2501 Fragaria x ananassa HOM05D006521 ORTHO05D008087 3.4e-129 465.7 358 67.0
ClCG01G018970 Citrullus lanatus HOM05D006521 ORTHO05D008087 9.8e-129 464.2 366 65.0
Duzib147G0857 Durio zibethinus HOM05D006521 ORTHO05D008087 2.8e-128 462.6 360 66.1
Sed0002886 Sechium edule HOM05D006521 ORTHO05D008087 4.8e-128 461.8 365 64.9
Cc07_g15580 Coffea canephora HOM05D006521 ORTHO05D008087 6.3e-128 461.5 359 65.2
CsaV3_6G045650 Cucumis sativus L. HOM05D006521 ORTHO05D008087 1.1e-127 460.7 363 64.7
Gorai.007G061700 Gossypium raimondii HOM05D006521 ORTHO05D008087 1.4e-127 460.3 365 64.7
TWI74G1358 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 3.1e-127 459.1 370 66.2
QL06p050323 Quercus lobata HOM05D006521 ORTHO05D008087 7.0e-127 458.0 350 66.6
Atru.chr4.229 Acer truncatum HOM05D006521 ORTHO05D008087 4.5e-126 455.3 354 67.2
Ca_16545_v3 Cicer arietinum L. HOM05D006521 ORTHO05D008087 1.0e-125 454.1 354 66.7
arahy.Tifrunner.gnm1.ann1.IK9JFE Arachis hypogaea HOM05D006521 ORTHO05D008087 6.5e-125 451.4 359 63.8
SalBow3G0008 Salvia bowleyana HOM05D006521 ORTHO05D008087 6.5e-125 451.4 363 62.3
arahy.Tifrunner.gnm1.ann1.2NAN3W Arachis hypogaea HOM05D006521 ORTHO05D008087 1.1e-124 450.7 359 63.8
Eucgr.I00394 Eucalyptus grandis HOM05D006521 ORTHO05D008087 1.5e-124 450.3 367 64.0
TWI77G0511 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 1.5e-124 450.3 361 65.4
Glyma.18G019200 Glycine max HOM05D006521 ORTHO05D008087 5.5e-124 448.4 366 63.4
Phvul.001G250400 Phaseolus vulgaris HOM05D006521 ORTHO05D008087 7.2e-124 448.0 356 64.6
Duzib264G0874 Durio zibethinus HOM05D006521 ORTHO05D008087 9.5e-124 447.6 359 63.8
Medtr3g087760 Medicago truncatula HOM05D006521 ORTHO05D008087 1.2e-123 447.2 346 66.8
SGA_v2.0_scaffold2G01323 Striga asiatica HOM05D006521 ORTHO05D008087 1.2e-123 447.2 362 61.0
Gorai.008G103700 Gossypium raimondii HOM05D006521 ORTHO05D008087 1.6e-123 446.8 360 65.0
Migut.H02388 Erythranthe guttata HOM05D006521 ORTHO05D008087 2.1e-123 446.4 362 62.2
Rhsim10G0157900 Rhododendron simsii HOM05D006521 ORTHO05D008087 2.1e-123 446.4 352 64.8
Sed0013283 Sechium edule HOM05D006521 ORTHO05D008087 3.6e-123 445.7 362 62.4
VMungo1383G3636 Vigna mungo HOM05D006521 ORTHO05D008087 8.0e-123 444.5 362 63.8
Cpa.g.sc20.228 Carica papaya HOM05D006521 ORTHO05D008087 2.3e-122 443.0 367 62.9
Psat5g088760 Pisum sativum HOM05D006521 ORTHO05D008087 5.2e-122 441.8 357 65.0
Ciclev10025891m.g Citrus clementina HOM05D006521 ORTHO05D008087 8.9e-122 441.0 362 64.1
Sc16g0005450 Simmondsia chinensis HOM05D006521 ORTHO05D008087 8.9e-122 441.0 346 65.6
DCAR_011503 Daucus carota HOM05D006521 ORTHO05D008087 1.2e-121 440.7 361 64.0
THA.LOC104807700 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 1.2e-121 440.7 351 63.8
Glyma.11G238100 Glycine max HOM05D006521 ORTHO05D008087 1.5e-121 440.3 357 62.5
Lj6g0010661 Lotus japonicus HOM05D006521 ORTHO05D008087 4.4e-121 438.7 345 64.1
THA.LOC104824871 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 4.4e-121 438.7 368 61.1
PGR004G2411 Punica granatum HOM05D006521 ORTHO05D008087 3.7e-120 435.6 352 63.9
Lj4A881T25 Lonicera japonica HOM05D006521 ORTHO05D008087 1.1e-119 434.1 373 62.5
Potri.005G079300 Populus trichocarpa HOM05D006521 ORTHO05D008087 1.2e-118 430.6 352 64.2
AUR62002034 Chenopodium quinoa HOM05D006521 ORTHO05D008087 2.0e-118 429.9 339 63.4
PGSC0003DMG400021832 Solanum tuberosum HOM05D006521 ORTHO05D008087 3.5e-118 429.1 367 59.9
Solyc05g051840.1 Solanum lycopersicum HOM05D006521 ORTHO05D008087 5.9e-118 428.3 364 59.9
Carub.0007s0173 Capsella rubella HOM05D006521 ORTHO05D008087 1.0e-117 427.6 362 59.7
Sopen05g030360 Solanum pennellii HOM05D006521 ORTHO05D008087 1.3e-117 427.2 359 60.7
Thhalv10025314m.g Eutrema salsugineum HOM05D006521 ORTHO05D008087 1.7e-117 426.8 371 58.2
AUR62003763 Chenopodium quinoa HOM05D006521 ORTHO05D008087 3.8e-117 425.6 339 63.1
Nitab4.5_0000715g0180 Nicotiana tabacum HOM05D006521 ORTHO05D008087 6.6e-117 424.9 381 58.8
TPR.G22881 Trifolium pratense HOM05D006521 ORTHO05D008087 1.9e-116 423.3 382 59.4
CARHR246880 Cardamine hirsuta HOM05D006521 ORTHO05D008087 3.3e-116 422.5 370 57.6
Aa31LG6G15450 Aethionema arabicum HOM05D006521 ORTHO05D008087 5.6e-116 421.8 350 60.6
AL7G12040 Arabidopsis lyrata HOM05D006521 ORTHO05D008087 9.5e-116 421.0 364 58.5
AT4G39820 Arabidopsis thaliana HOM05D006521 ORTHO05D008087 9.5e-116 421.0 362 58.6
CAN.G1494.2 Capsicum annuum HOM05D006521 ORTHO05D008087 2.8e-115 419.5 370 59.2
Ah.02g122760 Amaranthus hybridus HOM05D006521 ORTHO05D008087 4.7e-115 418.7 341 61.9
A08p23330 Brassica napus HOM05D006521 ORTHO05D008087 4.7e-115 418.7 353 60.1
BraA08t34287Z Brassica rapa HOM05D006521 ORTHO05D008087 4.7e-115 418.7 353 60.1
C03p78340 Brassica napus HOM05D006521 ORTHO05D008087 5.2e-114 415.2 372 58.1
Ah.02g120360 Amaranthus hybridus HOM05D006521 ORTHO05D008087 1.5e-113 413.7 341 61.3
BolC3t20094H Brassica oleracea HOM05D006521 ORTHO05D008087 1.5e-113 413.7 346 60.4
Sabra05G0065200 Salix brachista HOM05D006521 ORTHO05D004292 7.5e-113 411.4 351 61.8
Sp7g36070 Schrenkiella parvula HOM05D006521 ORTHO05D008087 7.5e-113 411.4 352 58.0
Haze_24978 Corylus avellana HOM05D006521 ORTHO05D008087 3.7e-112 409.1 359 58.8
Lj4A883T21 Lonicera japonica HOM05D006521 ORTHO05D008087 6.4e-112 408.3 364 60.4
unitig_32.g11814 Utricularia gibba HOM05D006521 ORTHO05D008087 1.8e-111 406.8 359 59.1
SHI11594 Sapria himalayana HOM05D006521 ORTHO05D008087 6.0e-110 401.7 352 58.5
CiPaw.03G138700 Carya illinoinensis HOM05D006521 ORTHO05D008087 1.0e-109 401.0 359 57.7
Actinidia36602 Actinidia chinensis HOM05D006521 ORTHO05D008087 2.5e-108 396.4 308 64.6
HPP92_016137 Vanilla planifolia HOM05D006521 ORTHO05D008087 1.4e-106 390.6 377 56.2
Hund13498 Selenicereus undatus HOM05D006521 ORTHO05D008087 8.9e-106 387.9 334 59.6
Cfa002704 Carpinus fangiana HOM05D006521 ORTHO05D008087 2.7e-102 376.3 359 55.4
Nn1g05268 Nelumbo nucifera HOM05D006521 ORTHO05D008087 6.2e-99 365.2 313 59.7
Nitab4.5_0005597g0010 Nicotiana tabacum HOM05D006521 ORTHO05D008087 6.8e-98 361.7 360 53.6
CDE10G1235 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 2.2e-96 356.7 348 53.4
ATR0789G153 Amborella trichopoda HOM05D006521 ORTHO05D008087 1.2e-94 350.9 477 41.9
Atru.chr1.3715 Acer truncatum HOM05D006521 ORTHO05D008087 4.4e-89 332.4 352 54.8
COL.COLO4_09911 Corchorus olitorius HOM05D006521 ORTHO05D008087 7.1e-87 325.1 351 52.1
BcaNung05326 Brassica carinata HOM05D006521 ORTHO05D008087 1.0e-85 321.2 295 55.3
C01p00850 Brassica napus HOM05D006521 ORTHO05D008087 3.9e-77 292.7 364 46.4
SEGI_26188 Sequoiadendron giganteum HOM05D006521 ORTHO05D008087 1.9e-76 290.4 556 33.5
EL10Ac6g15070 Beta vulgaris HOM05D006521 ORTHO05D008087 6.4e-72 275.4 208 67.3
ECA238G1388 Erigeron canadensis HOM05D001700 ORTHO05D002131 7.4e-68 261.9 162 79.6
SMO353G0213 Selaginella moellendorffii HOM05D006521 ORTHO05D008087 9.6e-68 261.5 348 39.9
ECA238G2228 Erigeron canadensis HOM05D006521 ORTHO05D008087 1.1e-66 258.1 156 82.1
AagrBONN_evm.TU.Sc2ySwM_368.767 Anthoceros agrestis HOM05D006521 ORTHO05D008087 2.4e-66 256.9 403 36.2
Mapoly0165s0018 Marchantia polymorpha HOM05D006521 ORTHO05D008087 9.9e-65 251.5 434 35.5
Os02g0550400 Oryza sativa ssp. japonica HOM05D006521 ORTHO05D008087 6.4e-64 248.8 338 43.8
Pp3c22_3810 Physcomitrium patens HOM05D006521 ORTHO05D008087 3.2e-63 246.5 441 34.0
A01p00740 Brassica napus HOM05D006521 ORTHO05D008087 2.1e-62 243.8 272 48.2
Pp3c19_5060 Physcomitrium patens HOM05D006521 ORTHO05D008087 2.3e-61 240.4 405 34.3
Atru.chr1.3697 Acer truncatum HOM05D006521 ORTHO05D008087 3.1e-58 229.9 146 77.4
Pp3c10_9400 Physcomitrium patens HOM05D006521 ORTHO05D008087 3.4e-57 226.5 381 33.1
Pp3c14_5890 Physcomitrium patens HOM05D006521 ORTHO05D008087 7.1e-55 218.8 404 32.2
Peaxi162Scf00295g00033 Petunia axillaris HOM05D006521 ORTHO05D008087 6.5e-48 195.7 174 58.6
BcaNung00904 Brassica carinata HOM05D006521 ORTHO05D008087 7.9e-46 188.7 117 76.9
HanXRQChr10g0288811 Helianthus annuus HOM05D006521 ORTHO05D008087 1.5e-41 174.5 105 87.6
CBR_g34484 Chara braunii HOM05D006521 ORTHO05D008087 1.8e-34 151.0 250 35.6
TAR636G0192 Trochodendron aralioides HOM05D006521 ORTHO05D008087 1.3e-32 144.8 129 62.0
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.0e-20 104.4 113 51.3
Atru.chr1.3698 Acer truncatum HOM05D006521 ORTHO05D008087 2.7e-14 84.0 59 69.5
GSVIVG01022164001 Vitis vinifera HOM05D006521 ORTHO05D008087 1.8e-13 81.3 80 56.2
PRCOL_00001846 Prasinoderma coloniale HOM05D006521 ORTHO05D008087 4.4e-12 76.6 279 27.6
CDE10G1372 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 4.7e-06 56.6 59 47.5


User provided reference genes

Program Settings