Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1777 Erigeron canadensis HOM05D004586 ORTHO05D005266 2.5e-275 951.8 609 100.0
HanXRQChr05g0140481 Helianthus annuus HOM05D004586 ORTHO05D005266 9.6e-134 481.5 571 60.8
HanXRQChr14g0441421 Helianthus annuus HOM05D004586 ORTHO05D005266 9.0e-132 474.9 575 65.2
Lsat_1_v5_gn_4_68860 Lactuca sativa HOM05D004586 ORTHO05D005266 2.2e-109 400.6 418 58.6
Hma1.2p1_0875F.1_g231553 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 5.2e-87 326.2 456 46.3
Hma1.2p1_0875F.1_g231580 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 5.2e-87 326.2 456 46.3
Actinidia09891 Actinidia chinensis HOM05D004586 ORTHO05D005266 6.4e-77 292.7 460 43.0
Lj1C734T7 Lonicera japonica HOM05D004586 ORTHO05D005266 8.3e-77 292.4 250 66.8
Nitab4.5_0009520g0030 Nicotiana tabacum HOM05D004586 ORTHO05D005266 8.3e-77 292.4 440 44.8
CSS0039758 Camellia sinensis var. sinensis HOM05D004586 ORTHO05D005266 1.4e-76 291.6 218 71.1
Nitab4.5_0003018g0070 Nicotiana tabacum HOM05D004586 ORTHO05D005266 3.2e-76 290.4 447 44.5
Actinidia12449 Actinidia chinensis HOM05D004586 ORTHO05D005266 4.1e-76 290.0 477 44.2
QL10p048480 Quercus lobata HOM05D004586 ORTHO05D005266 5.4e-76 289.7 441 44.9
FvH4_6g44910 Fragaria vesca HOM05D004586 ORTHO05D005266 3.9e-74 283.5 224 65.6
MD09G1092000 Malus domestica HOM05D004586 ORTHO05D005266 6.6e-74 282.7 220 65.9
Cpa.g.sc34.112 Carica papaya HOM05D004586 ORTHO05D005266 8.6e-74 282.3 208 68.8
FAN14G4866 Fragaria x ananassa HOM05D004586 ORTHO05D005266 1.1e-73 282.0 224 64.3
FAN05G3704 Fragaria x ananassa HOM05D004586 ORTHO05D005266 1.5e-73 281.6 224 65.2
Haze_13103 Corylus avellana HOM05D004586 ORTHO05D005266 2.5e-73 280.8 441 45.4
FAN02G1766 Fragaria x ananassa HOM05D004586 ORTHO05D005266 2.5e-73 280.8 224 64.7
Peaxi162Scf00007g02845 Petunia axillaris HOM05D004586 ORTHO05D005266 2.5e-73 280.8 448 44.4
MSTRG.14187 Avicennia marina HOM05D004586 ORTHO05D005266 9.5e-73 278.9 442 42.1
FAN09G2343 Fragaria x ananassa HOM05D004586 ORTHO05D005266 2.1e-72 277.7 228 64.0
MD17G1081900 Malus domestica HOM05D004586 ORTHO05D005266 2.8e-72 277.3 243 61.3
SGA_v2.0_scaffold159G37633 Striga asiatica HOM05D004586 ORTHO05D005266 2.8e-72 277.3 224 65.2
SGA_v2.0_scaffold49G18309 Striga asiatica HOM05D004586 ORTHO05D005266 2.8e-72 277.3 204 69.6
SalBow1G4799 Salvia bowleyana HOM05D004586 ORTHO05D005266 3.6e-72 276.9 209 68.9
SalBow7G1236 Salvia bowleyana HOM05D004586 ORTHO05D005266 3.6e-72 276.9 209 68.9
Potri.013G145300 Populus trichocarpa HOM05D004586 ORTHO05D005266 4.7e-72 276.6 483 41.4
Eucgr.B03848 Eucalyptus grandis HOM05D004586 ORTHO05D005266 6.2e-72 276.2 493 41.8
Oeu025511.1 Olea europaea HOM05D004586 ORTHO05D005266 1.1e-71 275.4 481 42.6
Solyc07g054460.4 Solanum lycopersicum HOM05D004586 ORTHO05D005266 1.8e-71 274.6 486 42.6
RcHm_v2.0_Chr2g0162091 Rosa chinensis HOM05D004586 ORTHO05D005266 3.1e-71 273.9 223 64.1
PGR042G3101 Punica granatum HOM05D004586 ORTHO05D005266 6.8e-71 272.7 456 41.7
PGSC0003DMG400018364 Solanum tuberosum HOM05D004586 ORTHO05D005266 6.8e-71 272.7 240 62.1
Ciclev10014470m.g Citrus clementina HOM05D004586 ORTHO05D005266 8.9e-71 272.3 477 40.9
Sopen07g028400 Solanum pennellii HOM05D004586 ORTHO05D005266 8.9e-71 272.3 242 62.4
GSVIVG01030569001 Vitis vinifera HOM05D004586 ORTHO05D005266 8.9e-71 272.3 448 42.6
Lj3g0023901 Lotus japonicus HOM05D004586 ORTHO05D005266 1.2e-70 271.9 218 63.8
Cfa014556 Carpinus fangiana HOM05D004586 ORTHO05D005266 2.6e-70 270.8 436 44.5
Sc12g0002770 Simmondsia chinensis HOM05D004586 ORTHO05D005266 3.4e-70 270.4 236 64.4
COL.COLO4_13701 Corchorus olitorius HOM05D004586 ORTHO05D005266 7.5e-70 269.2 407 43.7
Prupe.3G233000 Prunus persica HOM05D004586 ORTHO05D005266 7.5e-70 269.2 187 70.1
Sabra13G0117000 Salix brachista HOM05D004586 ORTHO05D005266 7.5e-70 269.2 478 40.2
TPR.G21660 Trifolium pratense HOM05D004586 ORTHO05D005266 7.5e-70 269.2 196 70.9
CAN.G78.83 Capsicum annuum HOM05D004586 ORTHO05D005266 9.8e-70 268.9 437 43.5
TWI18G0514 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 1.3e-69 268.5 244 61.9
PSO541G0834 Papaver somniferum HOM05D004586 ORTHO05D005266 2.9e-69 267.3 234 62.8
TAR627G0949 Trochodendron aralioides HOM05D004586 ORTHO05D005266 4.9e-69 266.5 468 42.1
CANSAT64G2104 Cannabis sativa HOM05D004586 ORTHO05D005266 8.3e-69 265.8 441 40.4
PSO675G0516 Papaver somniferum HOM05D004586 ORTHO05D005266 8.3e-69 265.8 234 62.8
unitig_26.g9937 Utricularia gibba HOM05D004586 ORTHO05D005266 1.4e-68 265.0 224 63.4
CiPaw.03G171000 Carya illinoinensis HOM05D004586 ORTHO05D005266 2.4e-68 264.2 429 43.4
arahy.Tifrunner.gnm1.ann1.FC6AAX Arachis hypogaea HOM05D004586 ORTHO05D005266 3.2e-68 263.8 229 62.0
vmacro12267 Vaccinium macrocarpon HOM05D004586 ORTHO05D005266 4.1e-68 263.5 481 41.2
COL.COLO4_08510 Corchorus olitorius HOM05D004586 ORTHO05D005266 5.4e-68 263.1 206 65.5
Manes.12G079600 Manihot esculenta HOM05D004586 ORTHO05D005266 5.4e-68 263.1 451 43.2
TWI36G0730 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 5.4e-68 263.1 481 41.4
Potri.019G104400 Populus trichocarpa HOM05D004586 ORTHO05D005266 7.0e-68 262.7 423 42.6
Medtr0072s0050 Medicago truncatula HOM05D004586 ORTHO05D005266 9.2e-68 262.3 203 67.5
Duzib106G1111 Durio zibethinus HOM05D004586 ORTHO05D005266 3.5e-67 260.4 449 40.8
Atru.chr6.3049 Acer truncatum HOM05D004586 ORTHO05D005266 4.6e-67 260.0 490 40.0
Migut.H01030 Erythranthe guttata HOM05D004586 ORTHO05D005266 4.6e-67 260.0 311 60.8
THA.LOC104826023 Tarenaya hassleriana HOM05D004586 ORTHO05D005266 6.6e-66 256.1 234 61.5
Lalb_Chr01g0005391 Lupinus albus HOM05D004586 ORTHO05D005266 1.1e-65 255.4 249 55.8
VMungo1127G2109 Vigna mungo HOM05D004586 ORTHO05D005266 1.1e-65 255.4 208 62.5
Thecc.02G173500 Theobroma cacao HOM05D004586 ORTHO05D005266 1.9e-65 254.6 490 39.0
Thhalv10006867m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 2.5e-65 254.2 236 58.9
Peaxi162Scf00485g00032 Petunia axillaris HOM05D004586 ORTHO05D005266 2.5e-65 254.2 504 39.7
BcaB02g06919 Brassica carinata HOM05D004586 ORTHO05D005266 4.3e-65 253.4 403 42.2
Phvul.011G112400 Phaseolus vulgaris HOM05D004586 ORTHO05D005266 5.6e-65 253.1 174 67.8
Rhsim06G0149700 Rhododendron simsii HOM05D004586 ORTHO05D005266 7.3e-65 252.7 419 42.2
Carub.0001s0267 Capsella rubella HOM05D004586 ORTHO05D005266 9.5e-65 252.3 197 65.5
Glyma.06G297000 Glycine max HOM05D004586 ORTHO05D005266 1.2e-64 251.9 189 65.6
AT1G03530 Arabidopsis thaliana HOM05D004586 ORTHO05D005266 1.6e-64 251.5 441 41.3
EL10As5g23555 Beta vulgaris HOM05D004586 ORTHO05D005266 2.1e-64 251.1 211 61.1
Psat0s4261g0040 Pisum sativum HOM05D004586 ORTHO05D005266 2.1e-64 251.1 208 64.4
Sp1g02460 Schrenkiella parvula HOM05D004586 ORTHO05D005266 2.8e-64 250.8 436 41.1
arahy.Tifrunner.gnm1.ann1.SANC69 Arachis hypogaea HOM05D004586 ORTHO05D005266 3.6e-64 250.4 246 56.9
BraA10t42477Z Brassica rapa HOM05D000330 ORTHO05D000209 3.6e-64 250.4 213 61.5
MBI02_g10548_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 3.6e-64 250.4 216 59.7
Gohir.A13G144300 Gossypium hirsutum HOM05D004586 ORTHO05D005266 8.1e-64 249.2 440 40.2
A10p02080 Brassica napus HOM05D000330 ORTHO05D005266 1.1e-63 248.8 217 60.4
BcaC05g24523 Brassica carinata HOM05D004586 ORTHO05D005266 1.4e-63 248.4 213 61.5
BolC5t28977H Brassica oleracea HOM05D004586 ORTHO05D005266 1.4e-63 248.4 213 61.5
Gohir.D13G149100 Gossypium hirsutum HOM05D004586 ORTHO05D005266 1.8e-63 248.1 445 39.3
PSO384G2677 Papaver somniferum HOM05D004586 ORTHO05D005266 2.3e-63 247.7 221 61.5
C05p01990 Brassica napus HOM05D004586 ORTHO05D005266 4.0e-63 246.9 421 40.9
AL1G13040 Arabidopsis lyrata HOM05D004586 ORTHO05D005266 6.8e-63 246.1 445 40.2
Duzib052G0504 Durio zibethinus HOM05D004586 ORTHO05D005266 6.8e-63 246.1 435 39.8
CsaV3_2G036510 Cucumis sativus L. HOM05D004586 ORTHO05D005266 8.9e-63 245.7 235 60.9
Gorai.013G166800 Gossypium raimondii HOM05D004586 ORTHO05D005266 8.9e-63 245.7 445 39.6
TAR629G0893 Trochodendron aralioides HOM05D004586 ORTHO05D005266 2.0e-62 244.6 485 45.4
MELO3C003861.2 Cucumis melo HOM05D004586 ORTHO05D005266 9.9e-62 242.3 235 59.1
Glyma.12G108100 Glycine max HOM05D004586 ORTHO05D005266 1.3e-61 241.9 188 64.9
Sed0007770 Sechium edule HOM05D004586 ORTHO05D005266 1.3e-61 241.9 236 58.5
ClCG02G017410 Citrullus lanatus HOM05D004586 ORTHO05D005266 6.4e-61 239.6 236 59.3
Ca_20687_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 8.3e-61 239.2 194 64.4
ATR0693G407 Amborella trichopoda HOM05D004586 ORTHO05D005266 1.4e-60 238.4 228 57.5
CARHR002890 Cardamine hirsuta HOM05D004586 ORTHO05D005266 1.4e-60 238.4 455 38.2
MELO3C021880.2 Cucumis melo HOM05D004586 ORTHO05D005266 1.4e-60 238.4 181 69.1
AUR62035735 Chenopodium quinoa HOM05D004586 ORTHO05D005266 1.6e-59 235.0 498 40.8
SHI10466 Sapria himalayana HOM05D004586 ORTHO05D005266 1.0e-58 232.3 248 55.6
CAN.G996.7 Capsicum annuum HOM05D004586 ORTHO05D005266 6.6e-58 229.6 437 41.0
Cc00_g21120 Coffea canephora HOM05D004586 ORTHO05D005266 1.1e-57 228.8 465 40.0
C08p00660 Brassica napus HOM05D004586 ORTHO05D005266 7.3e-57 226.1 237 55.3
Ca_27565_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 7.3e-57 226.1 200 59.5
HPP92_014062 Vanilla planifolia HOM05D004586 ORTHO05D005266 2.1e-56 224.6 247 50.6
BraA08t35631Z Brassica rapa HOM05D004586 ORTHO05D005266 8.1e-56 222.6 212 55.7
Ah.01g003940 Amaranthus hybridus HOM05D004586 ORTHO05D005266 1.1e-55 222.2 232 52.6
A08p37340 Brassica napus HOM05D004586 ORTHO05D005266 1.1e-55 222.2 247 49.8
Nitab4.5_0007732g0010 Nicotiana tabacum HOM05D004586 ORTHO05D005266 1.8e-55 221.5 175 65.7
Hund09647 Selenicereus undatus HOM05D004586 ORTHO05D005266 4.0e-55 220.3 427 41.0
Lj3g0000702 Lotus japonicus HOM05D004586 ORTHO05D005266 1.3e-53 215.3 225 55.1
DCAR_019194 Daucus carota HOM05D004586 ORTHO05D005266 2.2e-53 214.5 152 72.4
Aa31LG1G20890 Aethionema arabicum HOM05D004586 ORTHO05D005266 4.9e-53 213.4 208 53.4
Os05g0502800 Oryza sativa ssp. japonica HOM05D004586 ORTHO05D005266 4.9e-53 213.4 448 37.1
CDE02G0135 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 1.9e-52 211.5 171 63.7
Nn1g03938 Nelumbo nucifera HOM05D004586 ORTHO05D005266 2.4e-52 211.1 164 67.1
SEGI_15076 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 1.2e-51 208.8 220 51.8
AUR62000198 Chenopodium quinoa HOM05D004586 ORTHO05D005266 2.1e-51 208.0 465 41.1
Medtr2g090095 Medicago truncatula HOM05D004586 ORTHO05D005266 6.6e-50 203.0 212 52.4
Thhalv10024822m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 1.5e-49 201.8 157 61.8
BolC8t46864H Brassica oleracea HOM05D004586 ORTHO05D005266 4.3e-49 200.3 212 50.9
arahy.Tifrunner.gnm1.ann1.IS01QF Arachis hypogaea HOM05D004586 ORTHO05D005266 9.6e-49 199.1 207 55.6
Zm00001eb292050 Zea mays HOM05D004586 ORTHO05D005266 3.6e-48 197.2 206 53.9
arahy.Tifrunner.gnm1.ann1.7D4Z5S Arachis hypogaea HOM05D004586 ORTHO05D005266 6.9e-47 193.0 204 53.9
Psat5g270160 Pisum sativum HOM05D004586 ORTHO05D005266 6.9e-47 193.0 216 52.3
Dinv15471 Davidia involucrata HOM05D004586 ORTHO05D005266 1.6e-43 181.8 399 36.8
TPR.G27075 Trifolium pratense HOM05D004586 ORTHO05D005266 3.5e-43 180.6 184 54.3
CDE02G4059 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 6.6e-42 176.4 203 51.7
SMO137G0274 Selaginella moellendorffii HOM05D004586 ORTHO05D005266 4.8e-40 170.2 136 58.1
Pp3c14_14050 Physcomitrium patens HOM05D004586 ORTHO05D005266 1.1e-39 169.1 164 53.0
CBR_g12767 Chara braunii HOM05D004586 ORTHO05D005266 1.9e-36 158.3 224 44.6
Lalb_Chr22g0356411 Lupinus albus HOM05D004586 ORTHO05D005266 1.9e-36 158.3 203 47.8
SEGI_36208 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 1.2e-35 155.6 147 53.7
Pp3c10_10230 Physcomitrium patens HOM05D004586 ORTHO05D005266 1.3e-34 152.1 163 49.7
AagrBONN_evm.TU.Sc2ySwM_117.2920 Anthoceros agrestis HOM05D004586 ORTHO05D005266 9.6e-33 146.0 250 38.0
MBI02_g27225_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 3.7e-32 144.1 216 41.7
Mapoly0108s0039 Marchantia polymorpha HOM05D004586 ORTHO05D005266 4.8e-32 143.7 236 39.4
BcaB08g36102 Brassica carinata HOM05D004586 ORTHO05D005266 9.9e-30 136.0 120 58.3
BcaB01g00913 Brassica carinata HOM05D004586 ORTHO05D005266 8.4e-29 132.9 127 57.5
Psat0s10217g0080 Pisum sativum HOM05D004586 ORTHO05D005266 8.2e-24 116.3 95 67.4
PSO339G0898 Papaver somniferum HOM05D004586 ORTHO05D005266 9.3e-20 102.8 84 64.3
ECA248G3233 Erigeron canadensis HOM05D004586 ORTHO05D005266 3.5e-19 100.9 90 66.7
Medtr7g116780 Medicago truncatula HOM05D004586 ORTHO05D005266 3.1e-15 87.8 71 57.7
DCAR_012988 Daucus carota HOM05D004586 ORTHO05D005266 5.5e-12 77.0 75 61.3
MCO05G032 Micromonas commoda HOM05D004586 ORTHO05D005266 4.6e-11 73.9 194 30.4
Cre10.g467100 Chlamydomonas reinhardtii HOM05D004586 ORTHO05D005266 1.1e-09 69.3 165 28.5
AL2G23840 Arabidopsis lyrata HOM05D020923 ORTHO05D021440 6.3e-08 63.5 100 40.0
SEGI_25704 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 4.1e-07 60.8 87 44.8
AT4G03380 Arabidopsis thaliana HOM05D029365 ORTHO05D026876 4.5e-06 57.4 116 35.3


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