Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 0.0e+00 1087.0 537 100.0
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 3.8e-291 1004.2 537 90.9
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 3.9e-288 994.2 537 90.3
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 2.2e-251 872.1 561 77.0
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 2.7e-249 865.1 535 78.3
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 3.6e-249 864.8 537 79.3
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 1.8e-248 862.4 537 77.5
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 3.9e-248 861.3 537 78.6
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 2.8e-246 855.1 537 77.1
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 2.8e-246 855.1 538 76.8
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 3.7e-246 854.7 536 76.7
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 4.8e-246 854.4 537 77.8
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 4.1e-245 851.3 543 76.8
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 5.9e-244 847.4 537 77.5
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 1.0e-243 846.7 538 76.2
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 7.2e-242 840.5 536 75.2
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 1.6e-241 839.3 546 76.2
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 6.1e-241 837.4 544 75.2
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 4.0e-240 834.7 537 76.0
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 1.2e-239 833.2 537 75.4
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 2.4e-237 825.5 539 75.7
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 2.4e-237 825.5 537 75.2
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 5.4e-237 824.3 529 76.7
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 1.6e-236 822.8 537 75.8
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 2.7e-236 822.0 540 75.2
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 1.0e-235 820.1 535 74.6
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 1.1e-234 816.6 539 75.5
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 1.1e-234 816.6 540 74.1
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 2.5e-234 815.5 538 74.7
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 4.0e-232 808.1 620 66.8
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 2.4e-229 798.9 538 73.6
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 3.1e-229 798.5 537 74.1
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 9.1e-229 797.0 537 73.6
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 6.6e-227 790.8 537 73.0
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 3.3e-226 788.5 539 73.5
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 7.2e-226 787.3 537 72.4
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 2.8e-225 785.4 572 70.3
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 1.0e-224 783.5 540 71.3
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 4.0e-224 781.6 536 71.8
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 1.2e-223 780.0 545 70.5
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 1.5e-223 779.6 538 71.2
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 1.8e-221 772.7 536 71.1
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 5.4e-221 771.2 539 71.8
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 2.0e-220 769.2 540 70.4
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 2.7e-220 768.8 540 70.9
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 3.5e-220 768.5 539 71.8
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 4.6e-220 768.1 539 71.4
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 1.0e-219 766.9 549 69.0
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 1.7e-219 766.1 488 75.8
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.3e-219 765.8 539 71.4
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 5.0e-219 764.6 538 70.1
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 6.6e-219 764.2 539 71.4
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 2.5e-218 762.3 538 71.0
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 7.3e-218 760.8 545 69.4
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 9.5e-218 760.4 537 69.6
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 1.2e-217 760.0 538 70.8
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 2.1e-217 759.2 539 71.8
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 6.1e-217 757.7 545 70.5
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 1.8e-216 756.1 559 68.0
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 8.9e-216 753.8 540 69.1
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 1.5e-215 753.1 540 68.9
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 2.0e-215 752.7 540 68.9
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 4.9e-214 748.0 546 68.9
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 1.9e-213 746.1 547 67.8
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 1.2e-212 743.4 539 70.3
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 3.5e-212 741.9 539 68.1
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 1.0e-211 740.3 543 68.5
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 3.3e-210 735.3 462 77.5
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 1.6e-209 733.0 579 65.3
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 1.6e-209 733.0 579 65.3
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 1.1e-205 720.3 620 61.9
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 7.8e-204 714.1 536 65.7
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 1.6e-201 706.4 543 65.7
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 4.0e-200 701.8 474 74.3
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 1.7e-198 696.4 536 64.7
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 1.1e-197 693.7 536 64.4
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 3.0e-195 685.6 537 65.7
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 3.9e-195 685.3 491 68.0
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 4.3e-194 681.8 607 60.6
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 4.3e-194 681.8 491 68.2
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 6.8e-192 674.5 650 55.1
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 8.4e-190 667.5 539 64.2
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 4.2e-189 665.2 601 60.1
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 3.3e-186 655.6 441 74.8
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 7.3e-186 654.4 537 62.9
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 2.1e-177 626.3 460 68.5
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.1e-173 614.0 412 73.3
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 6.7e-171 604.7 537 59.2
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 1.6e-164 583.6 546 55.1
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 6.0e-164 581.6 436 67.0
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 2.3e-163 579.7 539 57.3
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 4.6e-156 555.4 490 59.6
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 6.9e-152 541.6 311 88.1
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 2.0e-146 523.5 367 72.2
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 4.2e-141 505.8 348 73.6
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 1.4e-136 490.7 509 52.5
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 2.6e-130 469.9 301 76.4
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 7.2e-125 451.8 884 34.6
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 6.1e-124 448.7 309 72.2
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 4.4e-122 442.6 846 34.6
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 4.8e-121 439.1 285 74.7
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 7.0e-120 435.3 892 33.3
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 2.0e-119 433.7 970 31.9
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 2.0e-119 433.7 373 60.9
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 1.9e-117 427.2 958 31.8
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 2.6e-114 416.8 243 80.2
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 6.1e-108 395.6 234 82.1
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 5.0e-102 375.9 308 62.0
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 8.9e-91 338.6 267 64.4
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 1.5e-82 311.2 196 77.6
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 6.0e-71 272.7 292 50.3
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 1.3e-70 271.6 169 76.9
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 3.9e-70 270.0 268 55.2
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 6.3e-36 156.4 128 64.1
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 6.5e-33 146.4 786 21.1
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 8.8e-30 136.0 80 82.5
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 1.3e-20 105.5 247 27.9
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 4.1e-19 100.5 102 52.0
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 7.0e-19 99.8 73 67.1
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 2.5e-16 91.3 245 27.3
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 2.3e-14 84.7 95 51.6
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 6.3e-12 76.6 333 24.0
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 3.5e-10 70.9 52 71.2
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 2.2e-09 68.2 34 88.2
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 9.4e-08 62.8 39 76.9


User provided reference genes

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