Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1593 Erigeron canadensis HOM05D000212 ORTHO05D187016 2.4e-90 335.5 174 100.0
ECA234G2295 Erigeron canadensis HOM05D002064 ORTHO05D002118 1.8e-16 90.1 151 35.1
ECA234G2243 Erigeron canadensis HOM05D000212 ORTHO05D000225 1.1e-13 80.9 148 35.1
ECA234G0898 Erigeron canadensis HOM05D004748 ORTHO05D005825 3.6e-09 65.9 59 57.6
ATR0618G086 Amborella trichopoda HOM05D000212 ORTHO05D000225 5.2e-08 62.0 154 32.5
TPR.G34126 Trifolium pratense HOM05D000212 ORTHO05D000225 6.8e-08 61.6 156 32.7
TPR.G34120 Trifolium pratense HOM05D000212 ORTHO05D000225 1.5e-07 60.5 149 32.2
HanXRQChr13g0417561 Helianthus annuus HOM05D000212 ORTHO05D000225 2.0e-07 60.1 150 32.0
HanXRQChr13g0417581 Helianthus annuus HOM05D000212 ORTHO05D000225 2.0e-07 60.1 150 32.0
MD15G1008400 Malus domestica HOM05D000212 ORTHO05D000225 2.6e-07 59.7 153 33.3
arahy.Tifrunner.gnm1.ann1.3Q2X1A Arachis hypogaea HOM05D000212 ORTHO05D002824 3.4e-07 59.3 150 33.3
arahy.Tifrunner.gnm1.ann1.D9F4A4 Arachis hypogaea HOM05D000212 ORTHO05D000225 3.4e-07 59.3 150 33.3
arahy.Tifrunner.gnm1.ann1.JHJC5G Arachis hypogaea HOM05D000212 ORTHO05D002824 3.4e-07 59.3 150 33.3
MELO3C011345.2 Cucumis melo HOM05D000212 ORTHO05D000225 3.4e-07 59.3 152 32.9
ClCG08G014070 Citrullus lanatus HOM05D000212 ORTHO05D000225 4.4e-07 58.9 152 32.9
CsaV3_2G024370 Cucumis sativus L. HOM05D000212 ORTHO05D000225 4.4e-07 58.9 152 32.9
HanXRQChr17g0570701 Helianthus annuus HOM05D000212 ORTHO05D000225 4.4e-07 58.9 150 31.3
Lalb_Chr09g0321561 Lupinus albus HOM05D000212 ORTHO05D000225 4.4e-07 58.9 150 32.0
Solyc01g111650.3 Solanum lycopersicum HOM05D000212 ORTHO05D000225 4.4e-07 58.9 151 32.5
Sopen01g053690 Solanum pennellii HOM05D000212 ORTHO05D000225 4.4e-07 58.9 151 32.5
PGSC0003DMG400006184 Solanum tuberosum HOM05D000212 ORTHO05D000225 4.4e-07 58.9 151 32.5
Actinidia22949 Actinidia chinensis HOM05D000212 ORTHO05D000225 5.8e-07 58.5 150 30.7
HanXRQChr04g0112321 Helianthus annuus HOM05D000212 ORTHO05D000225 5.8e-07 58.5 146 33.6
Medtr5g022730 Medicago truncatula HOM05D000212 ORTHO05D000225 5.8e-07 58.5 150 33.3
PSO541G0774 Papaver somniferum HOM05D000212 ORTHO05D000225 5.8e-07 58.5 152 32.9
PSO675G4858 Papaver somniferum HOM05D000212 ORTHO05D000225 5.8e-07 58.5 152 32.9
Peaxi162Scf00042g02411 Petunia axillaris HOM05D000212 ORTHO05D000225 5.8e-07 58.5 152 30.9
Prupe.1G361400 Prunus persica HOM05D000212 ORTHO05D000225 5.8e-07 58.5 153 32.0
arahy.Tifrunner.gnm1.ann1.GNTR4L Arachis hypogaea HOM05D000212 ORTHO05D000225 7.5e-07 58.2 150 32.0
arahy.Tifrunner.gnm1.ann1.S3H6DK Arachis hypogaea HOM05D000212 ORTHO05D000225 7.5e-07 58.2 150 32.0
arahy.Tifrunner.gnm1.ann1.WEA5TY Arachis hypogaea HOM05D000212 ORTHO05D000225 7.5e-07 58.2 150 32.0
ECA238G0889 Erigeron canadensis HOM05D000234 ORTHO05D000335 7.5e-07 58.2 131 35.9
Manes.01G149500 Manihot esculenta HOM05D000212 ORTHO05D000225 7.5e-07 58.2 152 32.2
Psat2g152480 Pisum sativum HOM05D000212 ORTHO05D000225 7.5e-07 58.2 150 32.7
TPR.G10556 Trifolium pratense HOM05D000212 ORTHO05D000225 7.5e-07 58.2 150 32.0
TPR.G34156 Trifolium pratense HOM05D000212 ORTHO05D000225 7.5e-07 58.2 152 30.9
CAN.G588.85 Capsicum annuum HOM05D000212 ORTHO05D000225 9.8e-07 57.8 151 33.1
Cpa.g.sc26.289 Carica papaya HOM05D000212 ORTHO05D000225 9.8e-07 57.8 153 32.0
CDE02G0238 Ceratophyllum demersum HOM05D000212 ORTHO05D000225 9.8e-07 57.8 140 32.9
CDE02G4787 Ceratophyllum demersum HOM05D000212 ORTHO05D000225 9.8e-07 57.8 146 32.9
COL.COLO4_22470 Corchorus olitorius HOM05D000212 ORTHO05D000225 9.8e-07 57.8 152 33.6
Medtr7g021380 Medicago truncatula HOM05D000212 ORTHO05D000225 9.8e-07 57.8 150 32.7
Sopen10g025320 Solanum pennellii HOM05D000212 ORTHO05D000225 9.8e-07 57.8 152 32.2
Aqoxy6G02136 Aquilegia oxysepala HOM05D000212 ORTHO05D000225 1.3e-06 57.4 145 31.7
CiPaw.08G127900 Carya illinoinensis HOM05D000212 ORTHO05D000225 1.3e-06 57.4 150 32.7
CDE05G3419 Ceratophyllum demersum HOM05D000212 ORTHO05D000225 1.3e-06 57.4 145 33.8
FvH4_1g11300 Fragaria vesca HOM05D000212 ORTHO05D000225 1.3e-06 57.4 150 33.3
FvH4_5g22600 Fragaria vesca HOM05D000212 ORTHO05D000225 1.3e-06 57.4 155 30.3
FAN18G2433 Fragaria x ananassa HOM05D000212 ORTHO05D000225 1.3e-06 57.4 155 30.3
MD08G1009500 Malus domestica HOM05D000212 ORTHO05D000225 1.3e-06 57.4 153 32.7
Medtr4g032460 Medicago truncatula HOM05D000212 ORTHO05D000225 1.3e-06 57.4 146 29.5
Phvul.003G265900 Phaseolus vulgaris HOM05D000212 ORTHO05D000225 1.3e-06 57.4 150 32.0
QL06p051302 Quercus lobata HOM05D000212 ORTHO05D000225 1.3e-06 57.4 150 32.7
PGSC0003DMG400026723 Solanum tuberosum HOM05D000212 ORTHO05D000225 1.3e-06 57.4 149 32.9
TWI56G1333 Tripterygium wilfordii HOM05D000212 ORTHO05D000225 1.3e-06 57.4 152 32.9
Cfa007010 Carpinus fangiana HOM05D000212 ORTHO05D000225 1.7e-06 57.0 150 32.7
Lsat_1_v5_gn_8_123241 Lactuca sativa HOM05D000212 ORTHO05D000225 1.7e-06 57.0 149 30.9
RcHm_v2.0_Chr2g0098781 Rosa chinensis HOM05D000212 ORTHO05D000225 1.7e-06 57.0 150 32.7
Sed0025160 Sechium edule HOM05D000212 ORTHO05D000225 1.7e-06 57.0 152 31.6
PGSC0003DMG400009581 Solanum tuberosum HOM05D000212 ORTHO05D000225 1.7e-06 57.0 149 30.9
vmacro22197 Vaccinium macrocarpon HOM05D000212 ORTHO05D000225 1.7e-06 57.0 153 29.4
Cpa.g.sc6.295 Carica papaya HOM05D000212 ORTHO05D000225 2.2e-06 56.6 150 33.3
CDE05G0353 Ceratophyllum demersum HOM05D005393 ORTHO05D006257 2.2e-06 56.6 145 33.1
Dinv31877 Davidia involucrata HOM05D000212 ORTHO05D000225 2.2e-06 56.6 154 32.5
Lalb_Chr05g0212221 Lupinus albus HOM05D000212 ORTHO05D000225 2.2e-06 56.6 150 31.3
Nitab4.5_0000369g0080 Nicotiana tabacum HOM05D000212 ORTHO05D000225 2.2e-06 56.6 149 30.9
Prupe.2G100400 Prunus persica HOM05D000212 ORTHO05D000225 2.2e-06 56.6 149 31.5
Rhsim10G0207900 Rhododendron simsii HOM05D000212 ORTHO05D000225 2.2e-06 56.6 150 30.0
Rhsim10G0208200 Rhododendron simsii HOM05D000212 ORTHO05D000225 2.2e-06 56.6 150 30.0
Sopen01g053680 Solanum pennellii HOM05D000212 ORTHO05D000225 2.2e-06 56.6 153 30.1
Actinidia20515 Actinidia chinensis HOM05D000212 ORTHO05D000225 2.9e-06 56.2 149 30.9
CSS0040580 Camellia sinensis var. sinensis HOM05D000212 ORTHO05D000225 2.9e-06 56.2 149 30.9
Medtr5g022710 Medicago truncatula HOM05D000212 ORTHO05D000225 2.9e-06 56.2 150 33.3
Solyc01g111640.3 Solanum lycopersicum HOM05D000212 ORTHO05D000225 2.9e-06 56.2 153 30.1
TWI12G1390 Tripterygium wilfordii HOM05D000212 ORTHO05D000225 2.9e-06 56.2 152 32.9
TAR381G0436 Trochodendron aralioides HOM05D000212 ORTHO05D000225 2.9e-06 56.2 145 34.5
TAR625G1340 Trochodendron aralioides HOM05D000212 ORTHO05D000225 2.9e-06 56.2 145 34.5
VMungo0251G0327 Vigna mungo HOM05D000212 ORTHO05D000225 2.9e-06 56.2 150 31.3
arahy.Tifrunner.gnm1.ann1.P8YTVG Arachis hypogaea HOM05D000212 ORTHO05D000225 3.7e-06 55.8 132 32.6
CiPaw.07G145700 Carya illinoinensis HOM05D000212 ORTHO05D000225 3.7e-06 55.8 152 32.9
FAN15G2561 Fragaria x ananassa HOM05D000212 ORTHO05D000225 3.7e-06 55.8 160 28.1
FAN19G1463 Fragaria x ananassa HOM05D000212 ORTHO05D000225 3.7e-06 55.8 150 32.7
FAN20G2684 Fragaria x ananassa HOM05D000212 ORTHO05D000225 3.7e-06 55.8 160 28.1
FAN23G2125 Fragaria x ananassa HOM05D000212 ORTHO05D000225 3.7e-06 55.8 150 32.7
FAN26G0437 Fragaria x ananassa HOM05D000212 ORTHO05D000225 3.7e-06 55.8 150 32.7
FAN27G2119 Fragaria x ananassa HOM05D000212 ORTHO05D000225 3.7e-06 55.8 160 28.1
FAN28G1102 Fragaria x ananassa HOM05D000212 ORTHO05D000225 3.7e-06 55.8 150 32.7
Glyma.02G045700 Glycine max HOM05D000212 ORTHO05D000225 3.7e-06 55.8 150 30.7
Gorai.010G002100 Gossypium raimondii HOM05D000212 ORTHO05D000225 3.7e-06 55.8 152 31.6
Hma1.2p1_0315F.1_g122410 Hydrangea macrophylla HOM05D000212 ORTHO05D000225 3.7e-06 55.8 150 33.3
Lj4g0001187 Lotus japonicus HOM05D000212 ORTHO05D000225 3.7e-06 55.8 145 32.4
Oeu013883.1 Olea europaea HOM05D000212 ORTHO05D000225 3.7e-06 55.8 157 29.9
Peaxi162Scf00078g01335 Petunia axillaris HOM05D000212 ORTHO05D000225 3.7e-06 55.8 149 31.5
Sed0006251 Sechium edule HOM05D000212 ORTHO05D000225 3.7e-06 55.8 150 30.7
Sc16g0001920 Simmondsia chinensis HOM05D000212 ORTHO05D000225 3.7e-06 55.8 150 30.7
Solyc11g042930.2 Solanum lycopersicum HOM05D000212 ORTHO05D000225 3.7e-06 55.8 149 30.2
Sopen11g019310 Solanum pennellii HOM05D000212 ORTHO05D000225 3.7e-06 55.8 149 30.2
Actinidia21458 Actinidia chinensis HOM05D000212 ORTHO05D000225 4.9e-06 55.5 144 31.9
Actinidia22146 Actinidia chinensis HOM05D000212 ORTHO05D000225 4.9e-06 55.5 126 31.7
CSS0006800 Camellia sinensis var. sinensis HOM05D000212 ORTHO05D000225 4.9e-06 55.5 150 30.0
CSS0020496 Camellia sinensis var. sinensis HOM05D000212 ORTHO05D000225 4.9e-06 55.5 149 30.2
Ciclev10002751m.g Citrus clementina HOM05D000212 ORTHO05D000225 4.9e-06 55.5 153 31.4
Glyma.11G079600 Glycine max HOM05D000212 ORTHO05D000225 4.9e-06 55.5 150 32.0
Hma1.2p1_0869F.1_g230640 Hydrangea macrophylla HOM05D000212 ORTHO05D000225 4.9e-06 55.5 145 31.7
Lsat_1_v5_gn_3_47680 Lactuca sativa HOM05D000212 ORTHO05D000225 4.9e-06 55.5 150 29.3
Lj2g0021209 Lotus japonicus HOM05D000212 ORTHO05D000225 4.9e-06 55.5 150 31.3
Manes.05G144500 Manihot esculenta HOM05D000212 ORTHO05D000225 4.9e-06 55.5 152 31.6
Oeu047132.1 Olea europaea HOM05D000212 ORTHO05D000225 4.9e-06 55.5 154 30.5
PSO017G0254 Papaver somniferum HOM05D000212 ORTHO05D000225 4.9e-06 55.5 142 33.1
QL02p012407 Quercus lobata HOM05D000212 ORTHO05D000225 4.9e-06 55.5 152 32.9
PGSC0003DMG400026719 Solanum tuberosum HOM05D000212 ORTHO05D000225 4.9e-06 55.5 144 32.6
SGA_v2.0_scaffold19G08563 Striga asiatica HOM05D000212 ORTHO05D000225 4.9e-06 55.5 161 30.4
vmacro07686 Vaccinium macrocarpon HOM05D000212 ORTHO05D000225 4.9e-06 55.5 155 32.3
Cfa013988 Carpinus fangiana HOM05D000212 ORTHO05D000225 6.4e-06 55.1 156 31.4
CiPaw.08G068300 Carya illinoinensis HOM05D000212 ORTHO05D000225 6.4e-06 55.1 147 33.3
Ca_24927_v3 Cicer arietinum L. HOM05D000212 ORTHO05D000225 6.4e-06 55.1 150 31.3
ECA233G1489 Erigeron canadensis HOM05D000212 ORTHO05D000225 6.4e-06 55.1 151 29.8
HanXRQChr15g0494111 Helianthus annuus HOM05D000212 ORTHO05D000225 6.4e-06 55.1 151 31.1
Lsat_1_v5_gn_4_71740 Lactuca sativa HOM05D000212 ORTHO05D000225 6.4e-06 55.1 149 30.2
Potri.005G109900 Populus trichocarpa HOM05D000212 ORTHO05D000225 6.4e-06 55.1 148 33.8
Sc07g0001120 Simmondsia chinensis HOM05D000212 ORTHO05D000225 6.4e-06 55.1 150 31.3
TPR.G10539 Trifolium pratense HOM05D000212 ORTHO05D000225 6.4e-06 55.1 150 31.3
TPR.G34139 Trifolium pratense HOM05D000212 ORTHO05D000225 6.4e-06 55.1 147 29.3
Actinidia02369 Actinidia chinensis HOM05D000212 ORTHO05D000225 8.3e-06 54.7 150 29.3
Aqoxy7G03126 Aquilegia oxysepala HOM05D000212 ORTHO05D000225 8.3e-06 54.7 143 31.5
ClCG02G004050 Citrullus lanatus HOM05D000212 ORTHO05D000225 8.3e-06 54.7 150 32.0
ECA234G2538 Erigeron canadensis HOM05D000212 ORTHO05D000225 8.3e-06 54.7 154 32.5
Migut.C00883 Erythranthe guttata HOM05D000212 ORTHO05D000225 8.3e-06 54.7 154 31.2
Eucgr.J02478 Eucalyptus grandis HOM05D000212 ORTHO05D000225 8.3e-06 54.7 145 33.1
Gohir.A06G001900 Gossypium hirsutum HOM05D000212 ORTHO05D000225 8.3e-06 54.7 152 31.6
Hma1.2p1_3034F.1_g331860 Hydrangea macrophylla HOM05D000212 ORTHO05D000225 8.3e-06 54.7 156 31.4
Medtr4g032450 Medicago truncatula HOM05D000212 ORTHO05D000225 8.3e-06 54.7 151 33.1
PGR119G1208 Punica granatum HOM05D000212 ORTHO05D000225 8.3e-06 54.7 149 29.5
RcHm_v2.0_Chr7g0210421 Rosa chinensis HOM05D000212 ORTHO05D000225 8.3e-06 54.7 148 31.8
SGA_v2.0_scaffold25G11208 Striga asiatica HOM05D000212 ORTHO05D000225 8.3e-06 54.7 161 31.1
THA.LOC104821581 Tarenaya hassleriana HOM05D000212 ORTHO05D000225 8.3e-06 54.7 154 31.8
Thecc.01G013700 Theobroma cacao HOM05D000212 ORTHO05D000225 8.3e-06 54.7 150 32.7
TWI38G1049 Tripterygium wilfordii HOM05D000212 ORTHO05D000225 8.3e-06 54.7 145 31.0


User provided reference genes

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