Gene: COL.COLO4_22470
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_22470
- Transcript Identifier COL.rna21218
- Gene Type Coding gene
- Location AWUE01017972.1 : 11217-12275 : positive
Gene Family Information
- ID HOM05D000212
- #Genes/#Species 1878/99
- Phylogenetic origin
- ID ORTHO05D000225
- #Genes/#Species 1348/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna21218
- GenBank OMO83504.1
- id gene22442
- gene_name COLO4_22470
- uniprot A0A1R3ILN1
Descriptions
- Description SKP1 component
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IEA | GOA Database | protein ubiquitination | |
| GO:0006511 | IEA | GOA Database | ubiquitin-dependent protein catabolic process | |
| GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process | |
| GO:0007346 | ISO | PLAZA Integrative Orthology | regulation of mitotic cell cycle | AT3G21850 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0097602 | IEA | GOA Database | cullin family protein binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G20160 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0019005 | ISO | PLAZA Integrative Orthology | SCF ubiquitin ligase complex | AT3G53060 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.8.1.2 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.target protein binding component SKP1/ASK1 |