Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G0147 Erigeron canadensis HOM05D004048 ORTHO05D004859 1.4e-151 539.7 281 100.0
HanXRQChr17g0562171 Helianthus annuus HOM05D004048 ORTHO05D004859 1.2e-131 473.4 288 86.1
Lsat_1_v5_gn_4_35260 Lactuca sativa HOM05D004048 ORTHO05D004859 3.0e-130 468.8 285 86.0
Rhsim07G0010400 Rhododendron simsii HOM05D004048 ORTHO05D004859 9.0e-127 457.2 268 86.6
Lj9C589T5 Lonicera japonica HOM05D004048 ORTHO05D004859 6.4e-125 451.1 283 82.3
Hund27241 Selenicereus undatus HOM05D004048 ORTHO05D004859 6.4e-125 451.1 286 81.8
CSS0029554 Camellia sinensis var. sinensis HOM05D004048 ORTHO05D004859 1.4e-124 449.9 297 79.1
Dinv32522 Davidia involucrata HOM05D004048 ORTHO05D004859 4.2e-124 448.4 298 79.5
CSS0027402 Camellia sinensis var. sinensis HOM05D004048 ORTHO05D004859 9.3e-124 447.2 297 79.1
FAN10G1698 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.3e-122 443.4 293 80.5
FAN10G3606 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.3e-122 443.4 293 80.5
Prupe.2G177600 Prunus persica HOM05D004048 ORTHO05D004859 1.3e-122 443.4 283 82.3
FvH4_7g15370 Fragaria vesca HOM05D004048 ORTHO05D004859 1.8e-122 443.0 293 80.5
Potri.014G090500 Populus trichocarpa HOM05D004048 ORTHO05D004859 1.8e-122 443.0 286 80.1
MD07G1131200 Malus domestica HOM05D004048 ORTHO05D004859 2.3e-122 442.6 288 80.9
Ah.05g180160 Amaranthus hybridus HOM05D004048 ORTHO05D004859 3.0e-122 442.2 268 83.2
RcHm_v2.0_Chr1g0357691 Rosa chinensis HOM05D004048 ORTHO05D004859 3.0e-122 442.2 287 81.9
FAN06G1753 Fragaria x ananassa HOM05D004048 ORTHO05D004859 3.9e-122 441.8 293 80.2
Manes.05G029300 Manihot esculenta HOM05D004048 ORTHO05D004859 1.1e-121 440.3 287 79.8
Thecc.01G352400 Theobroma cacao HOM05D004048 ORTHO05D004859 1.1e-121 440.3 296 77.4
Hma1.2p1_0335F.1_g128890 Hydrangea macrophylla HOM05D004048 ORTHO05D004859 1.5e-121 439.9 286 79.4
vmacro13227 Vaccinium macrocarpon HOM05D004048 ORTHO05D004859 1.9e-121 439.5 287 80.8
Actinidia10075 Actinidia chinensis HOM05D004048 ORTHO05D004859 2.5e-121 439.1 287 79.1
FAN03G0096 Fragaria x ananassa HOM05D004048 ORTHO05D004859 2.5e-121 439.1 293 79.9
QL04p055532 Quercus lobata HOM05D004048 ORTHO05D004859 3.3e-121 438.7 291 79.4
CAN.G439.29 Capsicum annuum HOM05D004048 ORTHO05D004859 4.3e-121 438.3 286 80.1
Sp5g01880 Schrenkiella parvula HOM05D004048 ORTHO05D004859 4.3e-121 438.3 289 79.2
Ciclev10020577m.g Citrus clementina HOM05D004048 ORTHO05D004859 5.6e-121 438.0 283 80.6
Gohir.D08G043100 Gossypium hirsutum HOM05D004048 ORTHO05D004859 5.6e-121 438.0 296 78.0
Gorai.004G041700 Gossypium raimondii HOM05D004048 ORTHO05D004859 5.6e-121 438.0 296 78.0
Gohir.A08G032200 Gossypium hirsutum HOM05D004048 ORTHO05D004859 7.4e-121 437.6 282 80.5
AUR62004413 Chenopodium quinoa HOM05D004048 ORTHO05D004859 9.6e-121 437.2 291 79.4
Solyc09g007130.3 Solanum lycopersicum HOM05D004048 ORTHO05D004859 9.6e-121 437.2 283 80.2
MBI03_g34597_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 1.3e-120 436.8 287 79.4
Sabra14G0065600 Salix brachista HOM05D004048 ORTHO05D004859 1.3e-120 436.8 286 79.4
Sopen09g002000 Solanum pennellii HOM05D004048 ORTHO05D004859 1.3e-120 436.8 283 80.2
PGSC0003DMG400002011 Solanum tuberosum HOM05D004048 ORTHO05D004859 2.1e-120 436.0 286 78.7
COL.COLO4_12778 Corchorus olitorius HOM05D004048 ORTHO05D004859 2.8e-120 435.6 287 79.1
Duzib268G0835 Durio zibethinus HOM05D004048 ORTHO05D004859 3.7e-120 435.3 298 75.8
Nitab4.5_0000615g0020 Nicotiana tabacum HOM05D004048 ORTHO05D004859 3.7e-120 435.3 289 78.5
TWI23G0617 Tripterygium wilfordii HOM05D004048 ORTHO05D004859 3.7e-120 435.3 286 78.3
Peaxi162Scf00217g00711 Petunia axillaris HOM05D004048 ORTHO05D004859 4.8e-120 434.9 286 79.4
Aqoxy5G04084 Aquilegia oxysepala HOM05D004048 ORTHO05D004859 6.2e-120 434.5 287 78.7
Carub.0004s2881 Capsella rubella HOM05D004048 ORTHO05D004859 8.2e-120 434.1 286 78.3
AL5G43890 Arabidopsis lyrata HOM05D004048 ORTHO05D004859 1.1e-119 433.7 297 76.8
arahy.Tifrunner.gnm1.ann1.8BBS1S Arachis hypogaea HOM05D004048 ORTHO05D004859 1.1e-119 433.7 287 78.4
arahy.Tifrunner.gnm1.ann1.9CR96V Arachis hypogaea HOM05D004048 ORTHO05D004859 1.1e-119 433.7 287 78.4
Migut.B01799 Erythranthe guttata HOM05D004048 ORTHO05D004859 1.1e-119 433.7 286 78.7
AT2G46110 Arabidopsis thaliana HOM05D004048 ORTHO05D004859 1.4e-119 433.3 286 79.0
AT3G61530 Arabidopsis thaliana HOM05D004048 ORTHO05D004859 1.8e-119 433.0 283 79.5
DCAR_025214 Daucus carota HOM05D004048 ORTHO05D004859 1.8e-119 433.0 286 78.0
Eucgr.B01988 Eucalyptus grandis HOM05D004048 ORTHO05D004859 1.8e-119 433.0 298 75.5
PGR004G0897 Punica granatum HOM05D004048 ORTHO05D004859 2.4e-119 432.6 298 76.5
BcaB02g07374 Brassica carinata HOM05D004048 ORTHO05D004859 3.1e-119 432.2 287 78.4
Thhalv10001521m.g Eutrema salsugineum HOM05D004048 ORTHO05D004859 3.1e-119 432.2 286 78.3
C06p27540 Brassica napus HOM05D004048 ORTHO05D004859 4.0e-119 431.8 287 78.0
BraA09t40782Z Brassica rapa HOM05D004048 ORTHO05D004859 5.3e-119 431.4 287 77.7
FAN06G0189 Fragaria x ananassa HOM05D004048 ORTHO05D004859 5.3e-119 431.4 310 76.1
A07p25550 Brassica napus HOM05D004048 ORTHO05D004859 6.9e-119 431.0 287 78.0
BolC6t37921H Brassica oleracea HOM05D004048 ORTHO05D004859 6.9e-119 431.0 287 78.0
BraA07t30196Z Brassica rapa HOM05D004048 ORTHO05D004859 6.9e-119 431.0 287 78.0
CANSAT56G4107 Cannabis sativa HOM05D004048 ORTHO05D004859 6.9e-119 431.0 287 78.7
EL10Ac1g00354 Beta vulgaris HOM05D004048 ORTHO05D004859 9.0e-119 430.6 286 78.7
C08p36390 Brassica napus HOM05D004048 ORTHO05D004859 9.0e-119 430.6 287 77.4
Sp4g28180 Schrenkiella parvula HOM05D004048 ORTHO05D004859 9.0e-119 430.6 286 78.3
TAR375G1056 Trochodendron aralioides HOM05D004048 ORTHO05D004859 1.2e-118 430.3 282 79.1
BcaC08g45130 Brassica carinata HOM05D004048 ORTHO05D004859 1.5e-118 429.9 287 77.7
A09p53600 Brassica napus HOM05D004048 ORTHO05D004859 1.5e-118 429.9 287 77.4
Aa31LG10G15450 Aethionema arabicum HOM05D004048 ORTHO05D004859 2.0e-118 429.5 286 77.6
BcaC07g40651 Brassica carinata HOM05D004048 ORTHO05D004859 2.0e-118 429.5 287 77.0
BolC8t51222H Brassica oleracea HOM05D004048 ORTHO05D004859 2.0e-118 429.5 287 77.0
CiPaw.02G034800 Carya illinoinensis HOM05D004048 ORTHO05D004859 2.0e-118 429.5 283 79.2
Rhsim07G0206900 Rhododendron simsii HOM05D004048 ORTHO05D004859 2.0e-118 429.5 318 72.3
Cc02_g21240 Coffea canephora HOM05D004048 ORTHO05D004859 2.6e-118 429.1 289 77.9
SGA_v2.0_scaffold4G02279 Striga asiatica HOM05D004048 ORTHO05D004859 2.6e-118 429.1 287 77.4
Glyma.07G064600 Glycine max HOM05D004048 ORTHO05D004859 3.4e-118 428.7 291 77.3
THA.LOC104817317 Tarenaya hassleriana HOM05D004048 ORTHO05D004859 3.4e-118 428.7 283 78.4
Haze_15565 Corylus avellana HOM05D004048 ORTHO05D004859 4.5e-118 428.3 295 74.9
Sc01g0003210 Simmondsia chinensis HOM05D004048 ORTHO05D004859 7.6e-118 427.6 283 78.1
VMungo0331G0386 Vigna mungo HOM05D004048 ORTHO05D004859 7.6e-118 427.6 283 78.8
arahy.Tifrunner.gnm1.ann1.8G3C0P Arachis hypogaea HOM05D004048 ORTHO05D004859 1.0e-117 427.2 287 77.4
Rhsim07G0205800 Rhododendron simsii HOM05D004048 ORTHO05D004859 1.3e-117 426.8 322 72.0
Atru.chr7.1494 Acer truncatum HOM05D004048 ORTHO05D004859 1.7e-117 426.4 298 75.2
Nn1g01686 Nelumbo nucifera HOM05D004048 ORTHO05D004859 2.9e-117 425.6 283 77.7
CsaV3_7G025860 Cucumis sativus L. HOM05D004048 ORTHO05D004859 3.8e-117 425.2 282 77.7
Gohir.D08G154300 Gossypium hirsutum HOM05D004048 ORTHO05D004859 4.9e-117 424.9 299 73.9
Gorai.004G160400 Gossypium raimondii HOM05D004048 ORTHO05D004859 4.9e-117 424.9 299 73.9
Phvul.010G104900 Phaseolus vulgaris HOM05D004048 ORTHO05D004859 1.4e-116 423.3 283 78.4
TPR.G28287 Trifolium pratense HOM05D004048 ORTHO05D004859 1.9e-116 422.9 283 77.4
Medtr8g028555 Medicago truncatula HOM05D004048 ORTHO05D004859 3.2e-116 422.2 283 78.1
PSO063G1481 Papaver somniferum HOM05D004048 ORTHO05D004859 4.2e-116 421.8 289 75.1
Lj1g0027864 Lotus japonicus HOM05D004048 ORTHO05D004859 7.1e-116 421.0 283 77.7
Oeu054354.2 Olea europaea HOM05D004048 ORTHO05D004859 7.1e-116 421.0 336 68.2
PSO170G0644 Papaver somniferum HOM05D004048 ORTHO05D004859 9.3e-116 420.6 289 75.1
Carub.0005s2822 Capsella rubella HOM05D004048 ORTHO05D004859 2.7e-115 419.1 294 74.5
Psat4g156920 Pisum sativum HOM05D004048 ORTHO05D004859 3.5e-115 418.7 283 77.4
RcHm_v2.0_Chr1g0357711 Rosa chinensis HOM05D004048 ORTHO05D004859 4.6e-115 418.3 282 77.3
Lalb_Chr17g0338041 Lupinus albus HOM05D004048 ORTHO05D004859 6.0e-115 417.9 283 77.0
TPR.G37181 Trifolium pratense HOM05D004048 ORTHO05D004859 6.0e-115 417.9 283 76.3
HPP92_005267 Vanilla planifolia HOM05D004048 ORTHO05D004859 1.3e-114 416.8 291 75.3
Lj5g0009706 Lotus japonicus HOM05D004048 ORTHO05D004859 3.0e-114 415.6 283 77.4
Ca_03490_v3 Cicer arietinum L. HOM05D004048 ORTHO05D004859 2.1e-112 409.5 309 71.2
MELO3C014805.2 Cucumis melo HOM05D004048 ORTHO05D004859 4.8e-112 408.3 282 74.5
BcaC07g40671 Brassica carinata HOM05D004048 ORTHO05D004859 1.4e-111 406.8 294 72.8
AUR62022619 Chenopodium quinoa HOM05D004048 ORTHO05D004859 1.8e-111 406.4 263 81.0
Nitab4.5_0005222g0030 Nicotiana tabacum HOM05D004048 ORTHO05D004859 2.4e-111 406.0 283 76.7
Duzib138G1147 Durio zibethinus HOM05D004048 ORTHO05D004859 9.0e-111 404.1 312 68.9
FvH4_7g15371 Fragaria vesca HOM05D004048 ORTHO05D004859 1.3e-109 400.2 324 67.3
CARHR107270 Cardamine hirsuta HOM05D004048 ORTHO05D004859 9.3e-108 394.0 260 79.2
GSVIVG01026967001 Vitis vinifera HOM05D004048 ORTHO05D004859 1.2e-107 393.7 258 79.8
MELO3C012767.2 Cucumis melo HOM05D004048 ORTHO05D004859 6.1e-107 391.3 346 63.0
SEGI_12250 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 1.9e-105 386.3 283 68.9
ClCG09G009090 Citrullus lanatus HOM05D004048 ORTHO05D004859 5.7e-105 384.8 264 75.8
unitig_60.g25627 Utricularia gibba HOM05D004048 ORTHO05D004859 1.4e-103 380.2 288 71.5
Glyma.09G254700 Glycine max HOM05D004048 ORTHO05D004859 6.9e-103 377.9 283 70.3
Os01g0225500 Oryza sativa ssp. japonica HOM05D004048 ORTHO05D004859 6.9e-103 377.9 282 68.8
Mapoly0035s0043 Marchantia polymorpha HOM05D004048 ORTHO05D004859 1.0e-101 374.0 282 67.7
Gohir.A08G133000 Gossypium hirsutum HOM05D004048 ORTHO05D004859 4.2e-100 368.6 271 71.6
Pp3c7_220 Physcomitrium patens HOM05D004048 ORTHO05D004859 3.6e-99 365.5 292 65.1
AagrBONN_evm.TU.Sc2ySwM_117.2358 Anthoceros agrestis HOM05D004048 ORTHO05D004859 3.9e-98 362.1 298 62.8
AagrBONN_evm.TU.Sc2ySwM_117.1042 Anthoceros agrestis HOM05D004048 ORTHO05D004859 8.8e-98 360.9 298 62.4
SMO144G0210 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 1.1e-97 360.5 289 64.7
CDE11G0110 Ceratophyllum demersum HOM05D004048 ORTHO05D004859 1.4e-95 353.6 246 74.8
MCO13G154 Micromonas commoda HOM05D004048 ORTHO05D004859 3.1e-95 352.4 280 63.6
FAN06G4041 Fragaria x ananassa HOM05D004048 ORTHO05D004859 3.2e-92 342.4 227 78.4
Cpa.g.sc11.73 Carica papaya HOM05D004048 ORTHO05D004859 2.7e-91 339.3 288 65.3
Cre12.g508550 Chlamydomonas reinhardtii HOM05D004048 ORTHO05D004859 6.1e-91 338.2 282 61.0
Medtr4g037305 Medicago truncatula HOM05D004048 ORTHO05D004859 1.4e-90 337.0 239 74.5
FAN10G3616 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.8e-90 336.7 317 60.3
Zm00001eb339000 Zea mays HOM05D004048 ORTHO05D004859 2.3e-90 336.3 195 88.7
ATR0751G082 Amborella trichopoda HOM05D004048 ORTHO05D004859 2.6e-89 332.8 194 86.6
Nn6g32447 Nelumbo nucifera HOM05D004048 ORTHO05D004859 2.6e-89 332.8 265 66.8
SMO356G0035 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 3.3e-89 332.4 280 61.1
CBR_g45417 Chara braunii HOM05D004048 ORTHO05D004859 4.4e-89 332.0 271 60.9
SMO119G0299 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 5.9e-86 321.6 254 63.8
SEGI_21771 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 1.9e-84 316.6 195 81.0
ATR0751G137 Amborella trichopoda HOM05D004048 ORTHO05D004859 9.4e-84 314.3 195 79.5
FAN06G1997 Fragaria x ananassa HOM05D004048 ORTHO05D004859 6.1e-83 311.6 302 58.9
FAN10G1509 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.2e-81 307.4 239 69.9
PRCOL_00005166 Prasinoderma coloniale HOM05D004048 ORTHO05D004859 2.2e-77 293.1 264 59.5
BcaC07g42671 Brassica carinata HOM05D004048 ORTHO05D004859 3.8e-77 292.4 220 71.8
Eucgr.B01984 Eucalyptus grandis HOM05D004048 ORTHO05D004859 4.0e-74 282.3 326 52.1
Medtr4g037245 Medicago truncatula HOM05D004048 ORTHO05D004859 3.1e-71 272.7 194 76.3
AL4G45340 Arabidopsis lyrata HOM05D004048 ORTHO05D004859 1.0e-69 267.7 197 72.6
Eucgr.B01986 Eucalyptus grandis HOM05D004048 ORTHO05D004859 1.2e-62 244.2 285 52.3
TPR.G28294 Trifolium pratense HOM05D004048 ORTHO05D004859 9.2e-55 218.0 210 60.5
Cfa001640 Carpinus fangiana HOM05D004048 ORTHO05D004859 5.0e-53 212.2 281 45.9
SEGI_25526 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 3.5e-46 189.5 161 61.5
Haze_27487 Corylus avellana HOM05D004048 ORTHO05D004859 4.9e-40 169.1 235 39.1
arahy.Tifrunner.gnm1.ann1.CIF5FW Arachis hypogaea HOM05D004048 ORTHO05D004859 1.4e-39 167.5 100 79.0
PGSC0003DMG400018716 Solanum tuberosum HOM05D004048 ORTHO05D004859 1.9e-39 167.2 130 67.7
Os01g0225400 Oryza sativa ssp. japonica HOM05D004048 ORTHO05D004859 7.1e-39 165.2 127 70.9
MBI17_g16531_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 2.3e-37 160.2 104 75.0
Haze_26957 Corylus avellana HOM05D005470 ORTHO05D006855 3.3e-36 156.4 194 46.9
MBI12_g43904_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 2.6e-33 146.7 96 79.2
Ca_03489_v3 Cicer arietinum L. HOM05D004048 ORTHO05D004859 1.1e-31 141.4 111 70.3
SHI16536 Sapria himalayana HOM05D004048 ORTHO05D004859 7.1e-31 138.7 76 85.5
Actinidia20163 Actinidia chinensis HOM05D004048 ORTHO05D004859 1.6e-30 137.5 172 52.9
Medtr4g037275 Medicago truncatula HOM05D004048 ORTHO05D004859 3.0e-29 133.3 76 84.2
CAN.G439.28 Capsicum annuum HOM05D004048 ORTHO05D004859 5.1e-29 132.5 76 82.9
FAN01G2460 Fragaria x ananassa HOM05D004048 ORTHO05D004859 5.8e-25 119.0 82 72.0
Cfa003872 Carpinus fangiana HOM05D004048 ORTHO05D004859 8.4e-24 115.2 72 75.0
HanXRQChr15g0474641 Helianthus annuus HOM05D004048 ORTHO05D004859 2.3e-21 107.1 62 87.1
Medtr4g037315 Medicago truncatula HOM05D004048 ORTHO05D004859 4.3e-20 102.8 72 66.7
arahy.Tifrunner.gnm1.ann1.63JPLQ Arachis hypogaea HOM05D004048 ORTHO05D004859 1.6e-19 100.9 76 61.8
Lj6g0001313 Lotus japonicus HOM05D004048 ORTHO05D004859 3.6e-19 99.8 95 52.6
SGA_v2.0_scaffold4G02383 Striga asiatica HOM05D004048 ORTHO05D051375 6.2e-19 99.0 73 76.7
Potri.002G164601 Populus trichocarpa HOM05D004048 ORTHO05D004859 3.1e-18 96.7 74 62.2
arahy.Tifrunner.gnm1.ann1.DMYH1R Arachis hypogaea HOM05D004048 ORTHO05D004859 6.9e-18 95.5 75 60.0
DCAR_025216 Daucus carota HOM05D003118 ORTHO05D003618 2.4e-15 87.0 79 67.1
ATR0751G274 Amborella trichopoda HOM05D004048 ORTHO05D004859 1.8e-13 80.9 63 57.1
FAN10G2371 Fragaria x ananassa HOM05D004048 ORTHO05D038698 3.5e-06 56.6 31 83.9


User provided reference genes

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