Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4312 Erigeron canadensis HOM05D003334 ORTHO05D004076 5.3e-63 244.2 124 100.0
HanXRQChr17g0559071 Helianthus annuus HOM05D003334 ORTHO05D004076 1.0e-50 203.4 122 81.1
Lsat_1_v5_gn_2_16301 Lactuca sativa HOM05D003334 ORTHO05D004076 1.9e-49 199.1 121 79.3
ECA238G1984 Erigeron canadensis HOM05D003334 ORTHO05D004076 4.3e-49 198.0 121 76.9
SGA_v2.0_scaffold269G46296 Striga asiatica HOM05D003334 ORTHO05D004076 2.2e-48 195.7 122 77.9
SGA_v2.0_scaffold447G51751 Striga asiatica HOM05D003334 ORTHO05D004076 2.2e-48 195.7 122 77.9
unitig_32.g11639 Utricularia gibba HOM05D003334 ORTHO05D004076 2.8e-48 195.3 121 78.5
HanXRQChr11g0333651 Helianthus annuus HOM05D003334 ORTHO05D004076 3.7e-48 194.9 121 78.5
Solyc08g074410.4 Solanum lycopersicum HOM05D003334 ORTHO05D004076 3.7e-48 194.9 121 76.9
Sopen08g023060 Solanum pennellii HOM05D003334 ORTHO05D004076 3.7e-48 194.9 121 76.9
Ca_14800_v3 Cicer arietinum L. HOM05D003334 ORTHO05D004076 8.2e-48 193.7 121 78.5
Migut.E01397 Erythranthe guttata HOM05D003334 ORTHO05D004076 1.1e-47 193.4 122 75.4
Hund21749 Selenicereus undatus HOM05D003334 ORTHO05D004076 1.4e-47 193.0 121 78.5
CiPaw.07G196900 Carya illinoinensis HOM05D003334 ORTHO05D004076 1.8e-47 192.6 121 77.7
Dinv04743 Davidia involucrata HOM05D003334 ORTHO05D004076 3.1e-47 191.8 121 76.9
Dinv27617 Davidia involucrata HOM05D003334 ORTHO05D004076 5.3e-47 191.0 121 76.0
Manes.12G077800 Manihot esculenta HOM05D003334 ORTHO05D004076 5.3e-47 191.0 121 75.2
Medtr8g007305 Medicago truncatula HOM05D003334 ORTHO05D004076 5.3e-47 191.0 121 77.7
QL06p038393 Quercus lobata HOM05D003334 ORTHO05D004076 5.3e-47 191.0 121 76.9
Nn1g02302 Nelumbo nucifera HOM05D003334 ORTHO05D004076 6.9e-47 190.7 121 76.0
Duzib170G0367 Durio zibethinus HOM05D003334 ORTHO05D004076 9.0e-47 190.3 121 76.0
GSVIVG01020576001 Vitis vinifera HOM05D003334 ORTHO05D004076 9.0e-47 190.3 121 76.9
Aqoxy7G02117 Aquilegia oxysepala HOM05D003334 ORTHO05D004076 1.5e-46 189.5 121 76.0
BcaC09g47791 Brassica carinata HOM05D003334 ORTHO05D004076 1.5e-46 189.5 121 76.0
Glyma.13G008200 Glycine max HOM05D003334 ORTHO05D004076 1.5e-46 189.5 122 74.6
TPR.G5320 Trifolium pratense HOM05D003334 ORTHO05D004076 1.5e-46 189.5 121 76.9
Actinidia29400 Actinidia chinensis HOM05D003334 ORTHO05D004076 2.0e-46 189.1 121 76.9
AT3G04600 Arabidopsis thaliana HOM05D003334 ORTHO05D004076 2.0e-46 189.1 121 76.0
MSTRG.11832 Avicennia marina HOM05D003334 ORTHO05D004076 2.0e-46 189.1 122 74.6
A01p40810 Brassica napus HOM05D003334 ORTHO05D004076 2.0e-46 189.1 121 76.9
BNapus_Darmor_BZH_scaffold_78p00900 Brassica napus HOM05D003334 ORTHO05D004076 2.0e-46 189.1 121 76.9
BraA01t04517Z Brassica rapa HOM05D003334 ORTHO05D004076 2.0e-46 189.1 121 76.9
CSS0022391 Camellia sinensis var. sinensis HOM05D003334 ORTHO05D004076 2.0e-46 189.1 121 75.2
Glyma.03G108900 Glycine max HOM05D003334 ORTHO05D004076 2.0e-46 189.1 121 76.0
PSO170G1996 Papaver somniferum HOM05D003334 ORTHO05D004076 2.0e-46 189.1 121 76.0
THA.LOC104821663 Tarenaya hassleriana HOM05D003334 ORTHO05D004076 2.0e-46 189.1 121 75.2
Thecc.09G264900 Theobroma cacao HOM05D003334 ORTHO05D004076 2.0e-46 189.1 121 76.0
TAR636G1778 Trochodendron aralioides HOM05D003334 ORTHO05D004076 2.0e-46 189.1 121 76.0
Lj3g0011249 Lotus japonicus HOM05D003334 ORTHO05D004076 2.6e-46 188.7 121 76.9
QL01p002104 Quercus lobata HOM05D003334 ORTHO05D004076 2.6e-46 188.7 121 76.9
arahy.Tifrunner.gnm1.ann1.GB3JX0 Arachis hypogaea HOM05D003334 ORTHO05D004076 3.4e-46 188.3 121 76.9
BcaB04g21362 Brassica carinata HOM05D003334 ORTHO05D004076 3.4e-46 188.3 121 75.2
Oeu063204.2 Olea europaea HOM05D003334 ORTHO05D004076 3.4e-46 188.3 122 73.0
BolC1t05738H Brassica oleracea HOM05D003334 ORTHO05D004076 4.5e-46 188.0 121 76.0
CSS0036286 Camellia sinensis var. sinensis HOM05D003334 ORTHO05D004076 4.5e-46 188.0 122 74.6
Phvul.010G046300 Phaseolus vulgaris HOM05D003334 ORTHO05D004076 4.5e-46 188.0 121 76.0
Sed0023632 Sechium edule HOM05D003334 ORTHO05D004076 4.5e-46 188.0 121 75.2
Sc06g0005190 Simmondsia chinensis HOM05D003334 ORTHO05D004076 4.5e-46 188.0 121 75.2
THA.LOC104802839 Tarenaya hassleriana HOM05D003334 ORTHO05D004076 4.5e-46 188.0 121 74.4
AL3G14620 Arabidopsis lyrata HOM05D003334 ORTHO05D004076 5.9e-46 187.6 121 74.4
Gohir.D09G101200 Gossypium hirsutum HOM05D003334 ORTHO05D004076 5.9e-46 187.6 121 74.4
Gorai.006G118600 Gossypium raimondii HOM05D003334 ORTHO05D004076 5.9e-46 187.6 121 74.4
Aqoxy7G03650 Aquilegia oxysepala HOM05D003334 ORTHO05D004076 7.7e-46 187.2 121 75.2
BcaB04g19317 Brassica carinata HOM05D003334 ORTHO05D004076 7.7e-46 187.2 121 75.2
AUR62009179 Chenopodium quinoa HOM05D003334 ORTHO05D004076 7.7e-46 187.2 121 74.4
Lalb_Chr21g0312861 Lupinus albus HOM05D003334 ORTHO05D004076 7.7e-46 187.2 121 74.4
VMungo0331G0230 Vigna mungo HOM05D003334 ORTHO05D004076 7.7e-46 187.2 121 75.2
CARHR078790 Cardamine hirsuta HOM05D003334 ORTHO05D004076 1.0e-45 186.8 121 74.4
ClCG09G011880 Citrullus lanatus HOM05D003334 ORTHO05D004076 1.0e-45 186.8 121 74.4
Psat2g164840 Pisum sativum HOM05D003334 ORTHO05D004076 1.3e-45 186.4 121 74.4
Psat4g222840 Pisum sativum HOM05D003334 ORTHO05D004076 1.3e-45 186.4 121 74.4
TAR365G0738 Trochodendron aralioides HOM05D003334 ORTHO05D004076 1.3e-45 186.4 120 75.8
HPP92_011708 Vanilla planifolia HOM05D003334 ORTHO05D004076 1.3e-45 186.4 121 74.4
BolC3t16362H Brassica oleracea HOM05D003334 ORTHO05D004076 1.7e-45 186.0 121 74.4
PSO063G6945 Papaver somniferum HOM05D003334 ORTHO05D004076 1.7e-45 186.0 121 75.2
Aa31LG5G20570 Aethionema arabicum HOM05D003334 ORTHO05D004076 2.2e-45 185.7 121 74.4
Thhalv10020864m.g Eutrema salsugineum HOM05D003334 ORTHO05D004076 2.2e-45 185.7 121 73.6
Hma1.2p1_0123F.1_g058080 Hydrangea macrophylla HOM05D003334 ORTHO05D004076 2.2e-45 185.7 121 74.4
AUR62005286 Chenopodium quinoa HOM05D003334 ORTHO05D004076 2.9e-45 185.3 121 73.6
BcaC01g04366 Brassica carinata HOM05D003334 ORTHO05D004076 3.8e-45 184.9 121 73.6
A03p33670 Brassica napus HOM05D003334 ORTHO05D004076 3.8e-45 184.9 121 73.6
C03p40860 Brassica napus HOM05D003334 ORTHO05D004076 3.8e-45 184.9 121 73.6
BolC3t16365H Brassica oleracea HOM05D003334 ORTHO05D004076 3.8e-45 184.9 121 73.6
BraA03t12541Z Brassica rapa HOM05D003334 ORTHO05D004076 3.8e-45 184.9 121 73.6
CDE08G0778 Ceratophyllum demersum HOM05D003334 ORTHO05D004076 3.8e-45 184.9 121 75.2
CANSAT54G0453 Cannabis sativa HOM05D003334 ORTHO05D004076 5.0e-45 184.5 121 74.4
Carub.0003s0375 Capsella rubella HOM05D003334 ORTHO05D004076 5.0e-45 184.5 121 72.7
MD12G1255800 Malus domestica HOM05D003334 ORTHO05D004076 5.0e-45 184.5 121 71.9
Gohir.A09G104500 Gossypium hirsutum HOM05D003334 ORTHO05D004076 8.5e-45 183.7 121 72.7
MD04G1236500 Malus domestica HOM05D003334 ORTHO05D004076 8.5e-45 183.7 122 70.5
Duzib168G1687 Durio zibethinus HOM05D003334 ORTHO05D004076 1.1e-44 183.3 121 72.7
Oeu044972.2 Olea europaea HOM05D003334 ORTHO05D004076 1.1e-44 183.3 121 71.9
Prupe.7G057000 Prunus persica HOM05D003334 ORTHO05D004076 1.1e-44 183.3 121 73.6
Mapoly0053s0020 Marchantia polymorpha HOM05D003334 ORTHO05D004076 1.4e-44 183.0 121 73.6
Atru.chr7.238 Acer truncatum HOM05D003334 ORTHO05D004076 2.5e-44 182.2 121 74.4
Rhsim12G0003500 Rhododendron simsii HOM05D003334 ORTHO05D004076 2.5e-44 182.2 121 74.4
Ciclev10008518m.g Citrus clementina HOM05D003334 ORTHO05D004076 5.5e-44 181.0 121 73.6
CAN.G195.16 Capsicum annuum HOM05D003334 ORTHO05D004076 7.2e-44 180.6 121 73.6
Prupe.7G057800 Prunus persica HOM05D003334 ORTHO05D004076 7.2e-44 180.6 121 72.7
RcHm_v2.0_Chr7g0223011 Rosa chinensis HOM05D003334 ORTHO05D004076 7.2e-44 180.6 121 71.9
Zm00001eb054210 Zea mays HOM05D003334 ORTHO05D004076 7.2e-44 180.6 121 73.6
Os12g0540900 Oryza sativa ssp. japonica HOM05D003334 ORTHO05D004076 1.2e-43 179.9 121 73.6
FAN17G0794 Fragaria x ananassa HOM05D003334 ORTHO05D004076 1.6e-43 179.5 121 71.1
Ah.15g091810 Amaranthus hybridus HOM05D003334 ORTHO05D004076 2.7e-43 178.7 121 71.9
FvH4_4g11950 Fragaria vesca HOM05D003334 ORTHO05D004076 2.7e-43 178.7 121 71.1
FAN12G4063 Fragaria x ananassa HOM05D003334 ORTHO05D004076 2.7e-43 178.7 121 71.1
RcHm_v2.0_Chr3g0493481 Rosa chinensis HOM05D003334 ORTHO05D004076 2.7e-43 178.7 121 71.1
FAN22G0185 Fragaria x ananassa HOM05D003334 ORTHO05D004076 3.6e-43 178.3 121 71.1
Eucgr.B01628 Eucalyptus grandis HOM05D003334 ORTHO05D004076 4.6e-43 177.9 121 71.9
COL.COLO4_25317 Corchorus olitorius HOM05D003334 ORTHO05D004076 1.4e-42 176.4 121 71.9
Sp3g03440 Schrenkiella parvula HOM05D003334 ORTHO05D004076 1.8e-42 176.0 121 71.9
Eucgr.B01376 Eucalyptus grandis HOM05D003334 ORTHO05D004076 2.3e-42 175.6 121 71.1
Potri.009G159300 Populus trichocarpa HOM05D003334 ORTHO05D004076 3.0e-42 175.3 121 70.2
BcaC09g48536 Brassica carinata HOM05D003334 ORTHO05D004076 3.9e-42 174.9 121 71.1
Sabra09G0124600 Salix brachista HOM05D003334 ORTHO05D004076 3.9e-42 174.9 121 71.1
Thhalv10004344m.g Eutrema salsugineum HOM05D003334 ORTHO05D004076 5.1e-42 174.5 121 69.4
TWI34G0756 Tripterygium wilfordii HOM05D003334 ORTHO05D004076 3.3e-41 171.8 121 69.4
PGR119G1638 Punica granatum HOM05D003334 ORTHO05D004076 4.3e-41 171.4 122 68.0
TWI15G0949 Tripterygium wilfordii HOM05D003334 ORTHO05D004076 1.3e-40 169.9 121 68.6
Atru.chr5.3183 Acer truncatum HOM05D003334 ORTHO05D004076 2.8e-40 168.7 117 70.9
Sp6g11650 Schrenkiella parvula HOM05D003334 ORTHO05D004076 2.8e-40 168.7 121 71.9
Aa31LG5G15020 Aethionema arabicum HOM05D003334 ORTHO05D004076 4.8e-40 167.9 121 69.4
Peaxi162Scf00213g01416 Petunia axillaris HOM05D003334 ORTHO05D004076 4.8e-40 167.9 148 61.5
BolC3t16384H Brassica oleracea HOM05D003334 ORTHO05D004076 6.3e-40 167.5 121 70.2
SalBow8G4285 Salvia bowleyana HOM05D003334 ORTHO05D004076 6.3e-40 167.5 111 74.8
ATR0743G002 Amborella trichopoda HOM05D003334 ORTHO05D004076 1.1e-39 166.8 112 72.3
C03p40970 Brassica napus HOM05D003334 ORTHO05D004076 1.1e-39 166.8 121 69.4
MBI07_g42069_MAGBIO Magnolia biondii HOM05D003334 ORTHO05D004076 1.4e-39 166.4 106 75.5
Oeu028097.1 Olea europaea HOM05D003334 ORTHO05D004076 1.8e-39 166.0 109 73.4
BcaB04g21381 Brassica carinata HOM05D003334 ORTHO05D004076 2.4e-39 165.6 121 66.9
BcaB06g25549 Brassica carinata HOM05D003334 ORTHO05D004076 2.4e-39 165.6 121 67.8
BolC3t16371H Brassica oleracea HOM05D003334 ORTHO05D004076 4.1e-39 164.9 121 69.4
arahy.Tifrunner.gnm1.ann1.L2SHRD Arachis hypogaea HOM05D003334 ORTHO05D004076 9.1e-39 163.7 106 76.4
BolC3t16373H Brassica oleracea HOM05D003334 ORTHO05D004076 9.1e-39 163.7 121 68.6
Lj7A725T58 Lonicera japonica HOM05D003334 ORTHO05D004076 1.2e-38 163.3 107 72.9
A07p01960 Brassica napus HOM05D003334 ORTHO05D004076 1.5e-38 162.9 121 67.8
BolC7t40804H Brassica oleracea HOM05D003334 ORTHO05D004076 1.5e-38 162.9 121 68.6
BraA07t27995Z Brassica rapa HOM05D003334 ORTHO05D004076 1.5e-38 162.9 121 67.8
Nitab4.5_0000288g0150 Nicotiana tabacum HOM05D003334 ORTHO05D004076 2.0e-38 162.5 100 77.0
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 3.4e-38 161.8 106 73.6
EL10Ac4g09810 Beta vulgaris HOM05D003334 ORTHO05D004076 5.9e-38 161.0 171 52.6
BcaC09g47814 Brassica carinata HOM05D003334 ORTHO05D004076 2.9e-37 158.7 117 67.5
BolC1t05722H Brassica oleracea HOM05D003334 ORTHO05D004076 2.9e-37 158.7 117 67.5
PRCOL_00004976 Prasinoderma coloniale HOM05D003334 ORTHO05D004076 1.4e-36 156.4 118 60.2
Cfa013451 Carpinus fangiana HOM05D003334 ORTHO05D004076 1.9e-36 156.0 107 72.0
Sabra04G0133700 Salix brachista HOM05D003334 ORTHO05D004076 1.9e-36 156.0 122 64.8
SMO143G0103 Selaginella moellendorffii HOM05D003334 ORTHO05D004076 2.5e-36 155.6 121 64.5
AagrBONN_evm.TU.Sc2ySwM_228.5148 Anthoceros agrestis HOM05D003334 ORTHO05D004076 7.2e-36 154.1 121 66.1
Pp3c2_27540 Physcomitrium patens HOM05D003334 ORTHO05D004076 1.2e-35 153.3 121 62.8
vmacro00932 Vaccinium macrocarpon HOM05D003334 ORTHO05D004076 1.0e-34 150.2 106 69.8
Cre12.g522350 Chlamydomonas reinhardtii HOM05D003334 ORTHO05D004076 1.8e-34 149.4 117 61.5
Haze_07729 Corylus avellana HOM05D003334 ORTHO05D004076 6.7e-34 147.5 126 61.9
BNapus_Darmor_BZH_scaffold_78p01040 Brassica napus HOM05D004384 ORTHO05D005797 2.6e-33 145.6 107 65.4
Hma1.2p1_1064F.1_g253620 Hydrangea macrophylla HOM05D003334 ORTHO05D004076 4.4e-33 144.8 100 69.0
BraA01t04501Z Brassica rapa HOM05D004384 ORTHO05D005797 1.3e-32 143.3 107 64.5
BcaB03g16657 Brassica carinata HOM05D003334 ORTHO05D004076 4.5e-30 134.8 121 60.3
CsaV3_5G014480 Cucumis sativus L. HOM05D003334 ORTHO05D004076 1.7e-29 132.9 82 76.8
MCO14G308 Micromonas commoda HOM05D003334 ORTHO05D004076 5.0e-29 131.3 116 52.6
SHI16564 Sapria himalayana HOM05D003334 ORTHO05D004076 8.5e-29 130.6 106 59.4
BcaC01g04365 Brassica carinata HOM05D003334 ORTHO05D004076 1.9e-28 129.4 176 45.5
FAN07G2734 Fragaria x ananassa HOM05D003334 ORTHO05D004076 9.4e-28 127.1 131 54.2
Haze_26816 Corylus avellana HOM05D003334 ORTHO05D004076 1.4e-26 123.2 117 51.3
Thhalv10003092m.g Eutrema salsugineum HOM05D003334 ORTHO05D004076 1.4e-23 113.2 121 52.9
Cc02_g30090 Coffea canephora HOM05D003334 ORTHO05D004076 1.2e-22 110.2 76 68.4
Nitab4.5_0003036g0010 Nicotiana tabacum HOM05D003334 ORTHO05D004076 5.9e-22 107.8 72 70.8
TPR.G21208 Trifolium pratense HOM05D003334 ORTHO05D004076 3.8e-21 105.1 107 56.1
SMO115G0240 Selaginella moellendorffii HOM05D003334 ORTHO05D004076 8.5e-21 104.0 98 44.9
CBR_g37637 Chara braunii HOM05D003334 ORTHO05D004076 5.5e-20 101.3 106 51.9
SEGI_09752 Sequoiadendron giganteum HOM05D003334 ORTHO05D004076 2.6e-17 92.4 62 72.6
C07p04090 Brassica napus HOM05D003334 ORTHO05D004076 1.7e-16 89.7 69 66.7
Nitab4.5_0009273g0030 Nicotiana tabacum HOM05D003334 ORTHO05D004076 1.8e-15 86.3 121 45.5
Peaxi162Scf00020g00242 Petunia axillaris HOM05D003334 ORTHO05D004076 5.4e-15 84.7 75 56.0
QL12p030357 Quercus lobata HOM05D003334 ORTHO05D004076 9.1e-15 84.0 86 53.5
Sed0014785 Sechium edule HOM05D003334 ORTHO05D004076 5.0e-13 78.2 47 78.7
SEGI_19003 Sequoiadendron giganteum HOM05D003334 ORTHO05D004076 4.7e-11 71.6 52 65.4
RcHm_v2.0_Chr7g0219201 Rosa chinensis HOM05D003334 ORTHO05D004076 3.0e-10 68.9 47 72.3
Nitab4.5_0009273g0020 Nicotiana tabacum HOM05D003334 ORTHO05D004076 2.6e-09 65.9 46 71.7
Nitab4.5_0006136g0030 Nicotiana tabacum HOM05D000111 ORTHO05D001334 3.5e-06 55.5 37 73.0
BcaC06g36447 Brassica carinata HOM05D003334 ORTHO05D000065 4.5e-06 55.1 38 71.1
Peaxi162Scf00145g00156 Petunia axillaris HOM05D003334 ORTHO05D004076 7.7e-06 54.3 40 62.5


User provided reference genes

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