Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 1.9e-175 619.0 304 100.0
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 6.5e-131 471.1 306 75.5
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 5.5e-130 468.0 303 76.2
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 6.1e-121 438.0 301 68.8
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 8.0e-121 437.6 300 70.7
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 6.8e-120 434.5 306 68.3
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 9.7e-119 430.6 305 68.9
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.2e-118 429.5 302 67.5
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 3.7e-118 428.7 299 68.2
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 4.8e-118 428.3 301 68.8
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 6.3e-118 427.9 305 68.2
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 4.1e-117 425.2 310 64.5
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 1.2e-116 423.7 323 64.7
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 1.0e-115 420.6 317 66.9
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 8.5e-115 417.5 304 65.5
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 1.9e-114 416.4 294 66.7
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 3.2e-114 415.6 300 66.0
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 5.5e-114 414.8 300 65.3
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 5.5e-114 414.8 294 67.0
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 1.6e-113 413.3 303 66.7
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.1e-113 412.9 298 65.1
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 2.7e-113 412.5 304 65.1
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 3.6e-113 412.1 295 65.4
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 5.2e-112 408.3 295 65.4
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 5.2e-112 408.3 304 64.1
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 1.2e-111 407.1 295 64.4
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 5.7e-111 404.8 289 66.1
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 9.8e-111 404.1 295 63.7
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 1.3e-110 403.7 296 63.5
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 1.7e-110 403.3 300 65.3
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 1.7e-110 403.3 307 63.8
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 1.7e-110 403.3 306 64.4
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 2.2e-110 402.9 295 63.7
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 2.8e-110 402.5 295 64.4
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.8e-110 402.5 289 65.1
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 2.8e-110 402.5 303 63.4
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 4.8e-110 401.7 305 63.9
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 4.8e-110 401.7 297 63.0
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 8.3e-110 401.0 298 65.4
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 8.3e-110 401.0 305 65.6
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 4.1e-109 398.7 300 65.0
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 5.4e-109 398.3 307 62.9
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 9.1e-109 397.5 297 63.0
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 9.1e-109 397.5 304 62.2
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 9.1e-109 397.5 306 62.4
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 1.2e-108 397.1 300 65.3
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 2.0e-108 396.4 298 64.1
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 2.0e-108 396.4 304 63.5
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 3.5e-108 395.6 300 64.7
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 5.9e-108 394.8 296 63.5
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 7.7e-108 394.4 293 65.2
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 1.3e-107 393.7 302 62.6
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 2.3e-107 392.9 300 64.0
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 2.3e-107 392.9 305 62.0
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 2.3e-107 392.9 302 64.6
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 2.9e-107 392.5 305 63.0
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 5.0e-107 391.7 305 61.6
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 8.6e-107 391.0 300 63.3
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 8.6e-107 391.0 294 63.3
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 1.9e-106 389.8 302 63.2
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 2.5e-106 389.4 296 63.2
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 4.2e-106 388.7 300 61.3
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 4.2e-106 388.7 298 63.1
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 5.5e-106 388.3 296 62.2
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 5.5e-106 388.3 294 64.6
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 7.2e-106 387.9 309 60.5
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.8e-105 386.0 294 63.3
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 3.6e-105 385.6 294 61.6
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 4.7e-105 385.2 293 62.5
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 5.2e-104 381.7 298 59.4
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 6.8e-104 381.3 309 59.2
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 8.9e-104 380.9 299 61.9
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 5.7e-103 378.3 296 63.9
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 3.7e-102 375.6 296 61.8
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 4.9e-102 375.2 297 60.3
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 2.4e-101 372.9 299 62.5
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 4.5e-100 368.6 295 58.6
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.2e-97 360.5 299 58.9
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 4.0e-96 355.5 309 57.9
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.6e-92 343.6 295 59.3
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 3.9e-91 339.0 299 55.5
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 1.5e-90 337.0 302 56.3
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 7.3e-90 334.7 310 53.5
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 1.4e-88 330.5 304 55.9
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 8.9e-88 327.8 258 62.4
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 4.9e-86 322.0 237 64.6
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 9.2e-85 317.8 232 66.4
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 4.3e-82 308.9 237 62.0
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 1.6e-81 307.0 234 62.4
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.6e-79 299.7 297 51.9
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 4.7e-73 278.9 411 39.7
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 1.4e-72 277.3 203 65.5
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 4.0e-72 275.8 232 59.5
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 6.8e-72 275.0 256 54.3
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 2.4e-69 266.5 273 49.1
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 5.1e-67 258.8 192 61.5
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.1e-64 251.1 294 45.2
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.9e-62 243.0 199 57.3
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 6.4e-62 241.9 286 45.5
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 1.4e-56 224.2 187 62.0
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.4e-56 223.4 255 48.6
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 1.5e-55 220.7 166 63.9
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 3.2e-53 213.0 174 60.9
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 2.7e-52 209.9 169 60.4
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.1e-50 204.5 283 42.0
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.6e-49 200.7 160 61.9
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 6.2e-49 198.7 140 67.1
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 4.0e-48 196.1 143 65.0
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 3.2e-45 186.4 175 56.6
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 2.1e-41 173.7 129 58.9
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 2.1e-41 173.7 129 58.9
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 2.1e-41 173.7 129 58.9
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 5.8e-39 165.6 128 60.2
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 1.0e-38 164.9 127 66.1
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 6.5e-38 162.2 162 52.5
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.5e-37 160.2 104 67.3
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 7.7e-31 138.7 129 51.9
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 3.9e-27 126.3 100 61.0
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 3.2e-21 106.7 138 44.9
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.4e-21 105.1 101 53.5
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.4e-21 105.1 102 54.9
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.4e-21 105.1 101 53.5
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.4e-21 105.1 101 53.5
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.7e-20 103.6 86 58.1
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.0e-18 97.4 86 58.1
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 1.6e-15 87.8 73 58.9
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 2.6e-15 87.0 154 34.4
TAR365G0745 Trochodendron aralioides HOM05D005899 ORTHO05D007445 6.7e-11 72.4 53 64.2
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.7e-10 68.6 55 63.6
FvH4_7g17710 Fragaria vesca HOM05D005899 ORTHO05D045384 3.8e-06 56.6 65 46.2


User provided reference genes

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