Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 9.3e-220 766.5 376 100.0
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 3.9e-194 681.4 360 91.1
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 3.9e-194 681.4 359 90.5
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 4.2e-188 661.4 362 87.6
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 6.7e-186 654.1 371 85.4
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 3.3e-185 651.7 355 85.6
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 9.1e-183 643.7 356 84.8
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 2.0e-182 642.5 359 86.4
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 2.6e-182 642.1 368 82.6
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.2e-181 639.0 356 83.7
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.2e-181 639.0 356 83.7
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 2.9e-181 638.6 358 83.8
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 3.8e-181 638.3 363 81.5
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 3.8e-181 638.3 373 82.6
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 8.5e-181 637.1 356 83.1
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 4.2e-180 634.8 359 81.3
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 7.2e-180 634.0 356 82.9
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 9.4e-180 633.6 361 82.8
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 9.4e-180 633.6 359 83.6
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 1.6e-179 632.9 356 83.4
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.1e-179 632.5 359 82.7
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 6.1e-179 630.9 356 82.9
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 6.1e-179 630.9 364 80.8
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 1.4e-178 629.8 364 82.7
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 1.8e-178 629.4 358 81.6
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 2.3e-178 629.0 360 81.9
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 3.0e-178 628.6 361 83.1
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 3.0e-178 628.6 355 82.0
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 3.9e-178 628.2 362 82.6
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 6.7e-178 627.5 361 82.8
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 6.7e-178 627.5 357 82.4
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 8.8e-178 627.1 364 80.2
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 8.8e-178 627.1 353 82.4
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 1.1e-177 626.7 360 82.5
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 1.5e-177 626.3 368 81.8
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 2.0e-177 625.9 364 81.6
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 2.6e-177 625.5 355 83.4
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 3.3e-177 625.2 353 82.2
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 3.3e-177 625.2 357 81.2
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 3.3e-177 625.2 372 80.6
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 4.4e-177 624.8 357 81.5
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 4.4e-177 624.8 359 81.9
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 4.4e-177 624.8 361 80.1
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 5.7e-177 624.4 356 81.2
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 5.7e-177 624.4 362 81.8
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 7.4e-177 624.0 356 82.6
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 9.7e-177 623.6 359 81.1
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 9.7e-177 623.6 358 80.7
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 9.7e-177 623.6 364 81.3
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 1.3e-176 623.2 361 81.7
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 1.7e-176 622.9 373 79.4
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 1.7e-176 622.9 352 82.7
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 2.2e-176 622.5 358 81.8
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 2.2e-176 622.5 358 81.8
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 2.2e-176 622.5 356 81.2
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 2.8e-176 622.1 357 80.4
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 6.3e-176 620.9 366 80.9
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 6.3e-176 620.9 362 81.5
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 2.4e-175 619.0 355 81.4
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 4.1e-175 618.2 378 79.1
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 4.1e-175 618.2 369 79.7
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 1.5e-174 616.3 356 80.6
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 2.0e-174 615.9 360 81.4
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 2.0e-174 615.9 361 81.7
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 2.0e-174 615.9 369 79.4
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 2.6e-174 615.5 358 80.7
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 2.6e-174 615.5 358 80.7
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 3.5e-174 615.1 352 81.5
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 4.5e-174 614.8 358 80.7
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 5.9e-174 614.4 385 77.7
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 1.3e-173 613.2 357 80.4
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 1.3e-173 613.2 367 80.1
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 1.5e-172 609.8 378 77.8
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 1.5e-172 609.8 360 78.6
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 3.2e-172 608.6 386 76.2
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 4.2e-172 608.2 356 80.3
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 5.5e-172 607.8 350 80.6
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 2.1e-171 605.9 391 75.4
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 2.7e-171 605.5 360 79.7
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 3.6e-171 605.1 358 79.9
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 3.6e-171 605.1 366 78.4
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 4.7e-171 604.7 377 76.4
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 6.1e-171 604.4 354 80.2
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 1.8e-170 602.8 364 79.7
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 3.0e-170 602.1 356 80.3
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 3.9e-170 601.7 364 79.9
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 3.9e-170 601.7 360 80.3
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 8.8e-170 600.5 354 80.8
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 1.1e-169 600.1 355 78.3
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 2.6e-169 599.0 345 80.9
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 3.3e-169 598.6 357 78.2
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 7.4e-169 597.4 370 76.2
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 7.4e-169 597.4 368 76.4
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 2.2e-168 595.9 371 78.7
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 2.0e-166 589.3 345 79.4
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 1.0e-165 587.0 369 76.2
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 1.3e-165 586.6 369 75.9
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 2.5e-164 582.4 369 72.9
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 7.2e-164 580.9 369 75.3
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.7e-163 578.9 371 75.7
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 4.0e-162 575.1 356 77.5
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 5.2e-162 574.7 354 76.8
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 1.5e-161 573.2 363 75.5
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 9.8e-161 570.5 345 78.3
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 1.7e-160 569.7 373 72.4
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 3.7e-160 568.5 368 73.9
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 6.3e-160 567.8 363 74.9
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 8.3e-160 567.4 365 74.8
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.8e-157 558.5 357 73.7
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 1.2e-155 553.5 357 74.5
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 1.8e-154 549.7 354 75.4
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 3.0e-154 548.9 354 74.3
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 5.2e-154 548.1 301 85.7
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 8.8e-154 547.4 358 73.2
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.0e-153 546.2 352 72.4
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 1.3e-152 543.5 354 73.7
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 1.7e-152 543.1 385 69.1
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 1.1e-151 540.4 441 64.6
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 3.1e-151 538.9 347 71.8
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 3.5e-150 535.4 345 72.2
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.9e-148 529.6 345 71.0
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 7.2e-148 527.7 343 71.4
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.6e-147 526.6 357 71.1
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.3e-146 522.7 357 70.0
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 8.3e-144 514.2 277 85.9
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 4.6e-142 508.4 366 68.6
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 5.0e-141 505.0 357 69.2
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.1e-140 503.8 290 80.7
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.5e-140 502.7 396 61.9
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 2.5e-132 476.1 350 63.7
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 9.5e-132 474.2 347 64.8
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 4.0e-130 468.8 243 90.1
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 2.0e-129 466.5 727 40.9
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 7.8e-126 454.5 366 63.1
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 3.9e-125 452.2 309 68.3
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 3.3e-124 449.1 334 61.1
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 1.9e-111 406.8 266 71.8
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 1.2e-110 404.1 348 56.0
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.3e-104 384.0 236 74.6
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 2.9e-104 382.9 334 59.3
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 6.9e-98 361.7 225 75.6
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 1.4e-95 354.0 251 64.9
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 3.5e-94 349.4 337 54.6
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 9.3e-87 324.7 202 76.7
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.0e-80 304.7 291 56.4
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 2.8e-51 206.8 131 76.3
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 6.5e-48 195.7 100 94.0
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 6.5e-48 195.7 124 81.5
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 2.3e-45 187.2 129 72.9
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 4.0e-45 186.4 129 73.6
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 5.2e-45 186.0 129 72.9
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 2.4e-42 177.2 128 69.5
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 7.7e-41 172.2 171 50.9
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.5e-39 167.9 101 79.2
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.5e-39 167.9 110 71.8
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 9.4e-39 165.2 98 76.5
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.7e-35 153.3 111 67.6
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 5.4e-34 149.4 130 58.5
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 9.2e-34 148.7 127 62.2
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 2.3e-24 117.5 69 79.7
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 1.5e-23 114.8 75 73.3
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 4.3e-23 113.2 67 77.6
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 5.6e-23 112.8 67 82.1
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 3.3e-15 87.0 86 53.5
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 7.3e-15 85.9 56 73.2
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 3.6e-14 83.6 67 61.2
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 4.7e-14 83.2 127 43.3
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 3.1e-13 80.5 75 56.0
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 2.6e-12 77.4 49 67.3
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 1.3e-08 65.1 46 67.4


User provided reference genes

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