Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G1427 Erigeron canadensis HOM05D005832 ORTHO05D007117 5.9e-87 324.7 239 100.0
HanXRQChr08g0225151 Helianthus annuus HOM05D005832 ORTHO05D007117 4.1e-64 248.8 236 81.8
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 1.7e-57 226.9 187 92.0
MSTRG.8527 Avicennia marina HOM05D005832 ORTHO05D007117 1.9e-53 213.4 212 78.3
AUR62006065 Chenopodium quinoa HOM05D005832 ORTHO05D007117 3.3e-53 212.6 189 85.2
GSVIVG01038586001 Vitis vinifera HOM05D005832 ORTHO05D007117 3.3e-53 212.6 228 75.9
PGSC0003DMG400018522 Solanum tuberosum HOM05D005832 ORTHO05D007117 4.3e-53 212.2 223 74.9
Solyc03g082890.3 Solanum lycopersicum HOM05D005832 ORTHO05D007117 7.3e-53 211.5 219 76.3
SalBow2G0471 Salvia bowleyana HOM05D005832 ORTHO05D007117 9.5e-53 211.1 240 72.1
Sopen03g022710 Solanum pennellii HOM05D005832 ORTHO05D007117 9.5e-53 211.1 219 76.3
Dinv29254 Davidia involucrata HOM05D005832 ORTHO05D007117 1.2e-52 210.7 241 72.2
Thecc.03G202400 Theobroma cacao HOM05D005832 ORTHO05D007117 3.6e-52 209.1 234 73.5
Prupe.2G314300 Prunus persica HOM05D005832 ORTHO05D007117 6.2e-52 208.4 228 75.4
QL09p007826 Quercus lobata HOM05D005832 ORTHO05D007117 8.1e-52 208.0 211 79.6
AUR62035562 Chenopodium quinoa HOM05D005832 ORTHO05D007117 2.4e-51 206.5 239 70.7
CDE09G0779 Ceratophyllum demersum HOM05D005832 ORTHO05D007117 3.1e-51 206.1 189 85.2
MBI18_g01156_MAGBIO Magnolia biondii HOM05D005832 ORTHO05D007117 3.1e-51 206.1 228 74.6
TWI39G1154 Tripterygium wilfordii HOM05D005832 ORTHO05D007117 3.1e-51 206.1 189 85.2
Oeu010700.1 Olea europaea HOM05D005832 ORTHO05D007117 4.0e-51 205.7 189 84.1
TAR375G0053 Trochodendron aralioides HOM05D005832 ORTHO05D007117 4.0e-51 205.7 189 85.7
Actinidia06134 Actinidia chinensis HOM05D005832 ORTHO05D007117 5.2e-51 205.3 189 84.7
COL.COLO4_16805 Corchorus olitorius HOM05D005832 ORTHO05D007117 5.2e-51 205.3 189 83.6
Peaxi162Scf00740g00233 Petunia axillaris HOM05D005832 ORTHO05D007117 5.2e-51 205.3 238 72.3
CsaV3_3G019700 Cucumis sativus L. HOM05D005832 ORTHO05D007117 1.2e-50 204.1 225 75.6
Cfa016207 Carpinus fangiana HOM05D005832 ORTHO05D007117 1.5e-50 203.8 224 74.6
ClCG05G009090 Citrullus lanatus HOM05D005832 ORTHO05D007117 1.5e-50 203.8 241 73.0
MELO3C019377.2 Cucumis melo HOM05D005832 ORTHO05D007117 1.5e-50 203.8 241 73.4
Atru.chr12.2262 Acer truncatum HOM05D005832 ORTHO05D007117 2.0e-50 203.4 189 84.7
Gohir.A09G185500 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.0e-50 203.4 239 71.5
Ciclev10021983m.g Citrus clementina HOM05D005832 ORTHO05D007117 2.6e-50 203.0 214 77.1
PGR142G2159 Punica granatum HOM05D005832 ORTHO05D007117 2.6e-50 203.0 224 73.7
DCAR_020339 Daucus carota HOM05D005832 ORTHO05D007117 3.4e-50 202.6 218 76.1
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.4e-50 202.6 189 84.1
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 3.4e-50 202.6 189 84.1
Cc02_g01260 Coffea canephora HOM05D005832 ORTHO05D007117 4.4e-50 202.2 212 75.0
Duzib084G1042 Durio zibethinus HOM05D005832 ORTHO05D007117 4.4e-50 202.2 189 84.1
Hma1.2p1_0591F.1_g185170 Hydrangea macrophylla HOM05D005832 ORTHO05D007117 4.4e-50 202.2 233 73.0
Nitab4.5_0007100g0060 Nicotiana tabacum HOM05D005832 ORTHO05D007117 5.8e-50 201.8 229 72.5
MD07G1294700 Malus domestica HOM05D005832 ORTHO05D007117 7.6e-50 201.4 190 84.2
CAN.G481.39 Capsicum annuum HOM05D005832 ORTHO05D007117 9.9e-50 201.1 211 76.3
CiPaw.06G044600 Carya illinoinensis HOM05D005832 ORTHO05D007117 1.3e-49 200.7 240 71.2
PSO170G4678 Papaver somniferum HOM05D005832 ORTHO05D007117 1.3e-49 200.7 185 85.9
Lj3A899T66 Lonicera japonica HOM05D005832 ORTHO05D007117 1.7e-49 200.3 159 69.2
RcHm_v2.0_Chr1g0381721 Rosa chinensis HOM05D005832 ORTHO05D007117 1.7e-49 200.3 185 85.4
Gorai.013G219100 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.2e-49 199.9 213 51.6
SGA_v2.0_scaffold125G33711 Striga asiatica HOM05D005832 ORTHO05D007117 3.8e-49 199.1 183 84.7
FvH4_7g32120 Fragaria vesca HOM05D005832 ORTHO05D007117 6.4e-49 198.4 183 85.8
FAN06G2446 Fragaria x ananassa HOM05D005832 ORTHO05D007117 6.4e-49 198.4 183 85.8
Haze_00242 Corylus avellana HOM05D005832 ORTHO05D007117 8.4e-49 198.0 224 73.2
PSO063G3297 Papaver somniferum HOM05D005832 ORTHO05D007117 8.4e-49 198.0 185 85.4
Nn3g18931 Nelumbo nucifera HOM05D005832 ORTHO05D007117 1.1e-48 197.6 189 83.1
Haze_00239 Corylus avellana HOM05D005832 ORTHO05D007117 1.4e-48 197.2 224 73.2
FAN10G0265 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.9e-48 196.8 183 85.8
MD01G1223900 Malus domestica HOM05D005832 ORTHO05D007117 3.2e-48 196.1 239 71.5
Eucgr.K00402 Eucalyptus grandis HOM05D005832 ORTHO05D007117 4.1e-48 195.7 248 59.7
ATR0680G157 Amborella trichopoda HOM05D005832 ORTHO05D007117 7.1e-48 194.9 187 80.2
unitig_578.g16672 Utricularia gibba HOM05D005832 ORTHO05D007117 1.2e-47 194.1 187 84.5
Gorai.004G199200 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.6e-47 193.7 189 66.1
Manes.01G039700 Manihot esculenta HOM05D005832 ORTHO05D007117 1.6e-47 193.7 183 83.1
Potri.012G018100 Populus trichocarpa HOM05D005832 ORTHO05D007117 1.6e-47 193.7 190 83.7
Gorai.008G174000 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.7e-47 193.0 189 82.5
Sabra12G0014400 Salix brachista HOM05D005832 ORTHO05D007117 3.5e-47 192.6 190 83.2
Gorai.006G202400 Gossypium raimondii HOM05D005832 ORTHO05D007117 6.0e-47 191.8 229 71.2
FAN10G0314 Fragaria x ananassa HOM05D005832 ORTHO05D007117 7.8e-47 191.4 186 84.4
Oeu055193.1 Olea europaea HOM05D005832 ORTHO05D007117 7.8e-47 191.4 244 54.9
Sed0026931 Sechium edule HOM05D005832 ORTHO05D007117 1.3e-46 190.7 226 72.1
Migut.F01014 Erythranthe guttata HOM05D005832 ORTHO05D007117 3.0e-46 189.5 133 73.7
Sc25g0000950 Simmondsia chinensis HOM05D005832 ORTHO05D007117 3.9e-46 189.1 210 74.3
Os10g0502000 Oryza sativa ssp. japonica HOM05D005832 ORTHO05D007117 5.1e-46 188.7 184 82.6
Gorai.007G219400 Gossypium raimondii HOM05D005832 ORTHO05D007117 8.7e-46 188.0 182 82.4
HPP92_013004 Vanilla planifolia HOM05D005832 ORTHO05D007117 8.7e-46 188.0 183 81.4
CANSAT21G0464 Cannabis sativa HOM05D005832 ORTHO05D007117 1.1e-45 187.6 189 79.9
vmacro10134 Vaccinium macrocarpon HOM05D005832 ORTHO05D007117 1.9e-45 186.8 190 81.1
Rhsim09G0206900 Rhododendron simsii HOM05D005832 ORTHO05D007117 2.5e-45 186.4 190 80.5
Lalb_Chr08g0240071 Lupinus albus HOM05D005832 ORTHO05D007117 5.6e-45 185.3 185 81.6
Zm00001eb220820 Zea mays HOM05D005832 ORTHO05D007117 9.6e-45 184.5 179 84.4
Lj1g0002080 Lotus japonicus HOM05D005832 ORTHO05D007117 2.1e-44 183.3 185 81.6
arahy.Tifrunner.gnm1.ann1.082NQD Arachis hypogaea HOM05D005832 ORTHO05D007117 2.8e-44 183.0 230 68.7
Psat5g075600 Pisum sativum HOM05D005832 ORTHO05D007117 2.8e-44 183.0 185 81.1
arahy.Tifrunner.gnm1.ann1.26JPZN Arachis hypogaea HOM05D005832 ORTHO05D007117 3.6e-44 182.6 192 78.6
TPR.G33655 Trifolium pratense HOM05D005832 ORTHO05D007117 1.1e-43 181.0 185 80.0
Medtr3g491890 Medicago truncatula HOM05D005832 ORTHO05D007117 1.4e-43 180.6 183 81.4
Phvul.009G050400 Phaseolus vulgaris HOM05D005832 ORTHO05D007117 1.4e-43 180.6 185 80.5
VMungo1309G1177 Vigna mungo HOM05D005832 ORTHO05D007117 1.4e-43 180.6 185 81.6
Ca_16726_v3 Cicer arietinum L. HOM05D005832 ORTHO05D007117 3.1e-43 179.5 185 81.1
Glyma.06G131300 Glycine max HOM05D005832 ORTHO05D007117 4.0e-43 179.1 185 81.6
Gohir.D07G112932 Gossypium hirsutum HOM05D005832 ORTHO05D007117 6.9e-43 178.3 213 48.4
Thhalv10014535m.g Eutrema salsugineum HOM05D005832 ORTHO05D007117 1.2e-42 177.6 183 79.2
Glyma.04G233500 Glycine max HOM05D005832 ORTHO05D007117 1.5e-42 177.2 185 80.0
EL10Ac3g05248 Beta vulgaris HOM05D005832 ORTHO05D007117 2.6e-42 176.4 214 59.3
SEGI_24850 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 5.8e-42 175.3 191 77.0
C09p43330 Brassica napus HOM05D005832 ORTHO05D007117 7.6e-42 174.9 211 70.6
BcaC04g20449 Brassica carinata HOM05D005832 ORTHO05D007117 9.9e-42 174.5 211 70.6
BolC9t57215H Brassica oleracea HOM05D005832 ORTHO05D007117 9.9e-42 174.5 211 70.6
A10p10930 Brassica napus HOM05D005832 ORTHO05D007117 1.3e-41 174.1 183 78.7
BraA10t43184Z Brassica rapa HOM05D005832 ORTHO05D007117 1.3e-41 174.1 183 78.7
Sp6g15630 Schrenkiella parvula HOM05D005832 ORTHO05D007117 1.3e-41 174.1 183 78.1
AT5G53490 Arabidopsis thaliana HOM05D005832 ORTHO05D007117 1.7e-41 173.7 183 78.1
Aa31LG3G9660 Aethionema arabicum HOM05D005832 ORTHO05D007117 2.9e-41 172.9 183 78.1
BcaB08g35713 Brassica carinata HOM05D005832 ORTHO05D007117 3.8e-41 172.6 183 78.7
CARHR266630 Cardamine hirsuta HOM05D005832 ORTHO05D007117 3.8e-41 172.6 183 78.1
Carub.0008s1366 Capsella rubella HOM05D005832 ORTHO05D007117 1.9e-40 170.2 183 77.0
Ah.13g070460 Amaranthus hybridus HOM05D005832 ORTHO05D007117 2.4e-40 169.9 104 76.9
Gohir.A05G409400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.7e-39 166.4 102 78.4
Gohir.A10G001400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.7e-39 166.4 102 78.4
Gohir.D01G203700 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.7e-39 166.4 102 78.4
Aqoxy6G02259 Aquilegia oxysepala HOM05D005832 ORTHO05D007117 7.8e-39 164.9 183 76.0
Gohir.D11G247000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 7.8e-39 164.9 131 63.4
Gohir.D02G154600 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.3e-38 164.1 102 77.5
Gohir.D03G118200 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.9e-38 162.5 131 64.1
Gohir.A13G227280 Gossypium hirsutum HOM05D005832 ORTHO05D007117 5.1e-38 162.2 102 76.5
Gohir.D09G180400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.1e-37 161.0 184 77.7
THA.LOC104799961 Tarenaya hassleriana HOM05D005832 ORTHO05D007117 1.1e-37 161.0 186 74.7
AL8G28210 Arabidopsis lyrata HOM05D005832 ORTHO05D007117 1.5e-37 160.6 164 82.9
FAN03G0720 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.9e-37 160.2 157 86.0
CSS0000669 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 2.5e-37 159.8 161 55.3
CSS0046458 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 2.5e-37 159.8 161 55.3
FAN01G1435 Fragaria x ananassa HOM05D005832 ORTHO05D007117 2.5e-37 159.8 156 87.8
Gohir.A11G163501 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.5e-37 159.8 181 53.6
Pp3c23_22190 Physcomitrium patens HOM05D005832 ORTHO05D007117 5.6e-37 158.7 189 72.0
AagrBONN_evm.TU.Sc2ySwM_228.2510 Anthoceros agrestis HOM05D005832 ORTHO05D007117 1.3e-33 147.5 110 64.5
Gohir.D12G161000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.1e-32 144.4 181 51.4
Mapoly0014s0126 Marchantia polymorpha HOM05D005832 ORTHO05D007117 2.1e-31 140.2 193 62.7
CBR_g40818 Chara braunii HOM05D005832 ORTHO05D007117 6.0e-31 138.7 106 66.0
SMO111G0094 Selaginella moellendorffii HOM05D005832 ORTHO05D007117 3.9e-30 136.0 158 77.2
Gorai.004G257600 Gossypium raimondii HOM05D005832 ORTHO05D007117 5.6e-29 132.1 76 82.9
Duzib205G0233 Durio zibethinus HOM05D005832 ORTHO05D007117 8.1e-28 128.3 189 68.3
SEGI_05976 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 1.2e-18 97.8 63 74.6
Cre09.g404000 Chlamydomonas reinhardtii HOM05D005832 ORTHO05D007117 3.1e-11 73.2 179 40.8
Actinidia18663 Actinidia chinensis HOM05D005832 ORTHO05D007117 5.5e-08 62.4 109 76.1


User provided reference genes

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