Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4484 Erigeron canadensis HOM05D001292 ORTHO05D001202 2.0e-115 419.1 208 100.0
Lsat_1_v5_gn_3_48100 Lactuca sativa HOM05D001292 ORTHO05D001202 2.4e-23 113.2 130 43.1
TAR374G1183 Trochodendron aralioides HOM05D001292 ORTHO05D001202 5.8e-22 108.6 160 38.1
PSO832G2131 Papaver somniferum HOM05D001292 ORTHO05D001202 1.3e-21 107.5 176 34.7
ECA246G0922 Erigeron canadensis HOM05D001292 ORTHO05D001202 1.7e-21 107.1 148 39.9
PSO063G4088 Papaver somniferum HOM05D001292 ORTHO05D001202 1.7e-21 107.1 176 35.2
Sc11g0001210 Simmondsia chinensis HOM05D001292 ORTHO05D001202 3.8e-21 105.9 175 36.6
Oeu056395.2 Olea europaea HOM05D001292 ORTHO05D001202 4.9e-21 105.5 135 41.5
Nn4g22805 Nelumbo nucifera HOM05D001292 ORTHO05D001202 6.4e-21 105.1 164 34.8
TWI18G1467 Tripterygium wilfordii HOM05D001292 ORTHO05D001202 6.4e-21 105.1 129 41.1
Sed0021630 Sechium edule HOM05D001292 ORTHO05D001202 1.9e-20 103.6 126 42.9
arahy.Tifrunner.gnm1.ann1.UYF69H Arachis hypogaea HOM05D001292 ORTHO05D001202 2.4e-20 103.2 160 38.1
Phvul.003G052200 Phaseolus vulgaris HOM05D001292 ORTHO05D001202 2.4e-20 103.2 132 40.2
Atru.chr11.2015 Acer truncatum HOM05D001292 ORTHO05D001202 3.2e-20 102.8 129 39.5
CANSAT01G2663 Cannabis sativa HOM05D001292 ORTHO05D001202 3.2e-20 102.8 144 37.5
ClCG05G025290 Citrullus lanatus HOM05D001292 ORTHO05D001202 3.2e-20 102.8 164 37.8
CsaV3_5G031600 Cucumis sativus L. HOM05D001292 ORTHO05D001202 5.4e-20 102.1 133 39.8
Gorai.012G171400 Gossypium raimondii HOM05D001292 ORTHO05D001202 5.4e-20 102.1 129 38.8
CSS0049204 Camellia sinensis var. sinensis HOM05D001292 ORTHO05D001202 7.1e-20 101.7 133 39.8
ECA233G2320 Erigeron canadensis HOM05D001292 ORTHO05D001202 7.1e-20 101.7 129 39.5
Gohir.D04G178300 Gossypium hirsutum HOM05D001292 ORTHO05D001202 7.1e-20 101.7 129 38.8
VMungo0251G2116 Vigna mungo HOM05D001292 ORTHO05D001202 7.1e-20 101.7 163 34.4
ATR0730G146 Amborella trichopoda HOM05D001292 ORTHO05D001202 9.3e-20 101.3 134 40.3
Actinidia13513 Actinidia chinensis HOM05D001292 ORTHO05D001202 1.2e-19 100.9 130 40.8
Gohir.A04G135200 Gossypium hirsutum HOM05D001292 ORTHO05D001202 1.2e-19 100.9 129 38.8
Dinv24863 Davidia involucrata HOM05D001292 ORTHO05D001202 1.6e-19 100.5 129 41.1
Nitab4.5_0002579g0090 Nicotiana tabacum HOM05D001292 ORTHO05D001202 1.6e-19 100.5 131 38.2
Potri.010G040600 Populus trichocarpa HOM05D001292 ORTHO05D001202 2.1e-19 100.1 153 35.9
THA.LOC104823662 Tarenaya hassleriana HOM05D001292 ORTHO05D001202 2.1e-19 100.1 118 40.7
arahy.Tifrunner.gnm1.ann1.XAFC77 Arachis hypogaea HOM05D001292 ORTHO05D001202 2.7e-19 99.8 160 38.1
Ca_22729_v3 Cicer arietinum L. HOM05D001292 ORTHO05D001202 3.5e-19 99.4 163 34.4
Lalb_Chr09g0335011 Lupinus albus HOM05D001292 ORTHO05D001202 3.5e-19 99.4 132 37.9
Thecc.02G248100 Theobroma cacao HOM05D001292 ORTHO05D001202 3.5e-19 99.4 133 37.6
MELO3C012000.2 Cucumis melo HOM05D001292 ORTHO05D001202 4.6e-19 99.0 133 38.3
Duzib248G1000 Durio zibethinus HOM05D001292 ORTHO05D001202 4.6e-19 99.0 133 37.6
Nitab4.5_0000113g0260 Nicotiana tabacum HOM05D001292 ORTHO05D001202 6.0e-19 98.6 136 39.0
Sopen04g014200 Solanum pennellii HOM05D001292 ORTHO05D001202 6.0e-19 98.6 134 38.1
SGA_v2.0_scaffold8G04226 Striga asiatica HOM05D001292 ORTHO05D001202 6.0e-19 98.6 135 37.8
CiPaw.05G150600 Carya illinoinensis HOM05D001292 ORTHO05D001202 7.8e-19 98.2 157 36.3
Ciclev10031081m.g Citrus clementina HOM05D001292 ORTHO05D001202 7.8e-19 98.2 127 38.6
HanXRQChr12g0368581 Helianthus annuus HOM05D001292 ORTHO05D001202 7.8e-19 98.2 130 40.0
HanXRQChr15g0490121 Helianthus annuus HOM05D001292 ORTHO05D001202 7.8e-19 98.2 126 40.5
MSTRG.7894 Avicennia marina HOM05D001292 ORTHO05D001202 1.0e-18 97.8 138 37.7
GSVIVG01020235001 Vitis vinifera HOM05D001292 ORTHO05D001202 1.0e-18 97.8 133 39.1
Manes.13G030900 Manihot esculenta HOM05D001292 ORTHO05D001202 1.3e-18 97.4 135 34.8
Prupe.1G254600 Prunus persica HOM05D001292 ORTHO05D001202 1.3e-18 97.4 132 35.6
Hund25343 Selenicereus undatus HOM05D001292 ORTHO05D001202 1.3e-18 97.4 126 40.5
CSS0024382 Camellia sinensis var. sinensis HOM05D001292 ORTHO05D001202 1.7e-18 97.1 133 38.3
Cc11_g14630 Coffea canephora HOM05D001292 ORTHO05D001202 1.7e-18 97.1 132 37.9
Nitab4.5_0000034g0260 Nicotiana tabacum HOM05D001292 ORTHO05D001202 1.7e-18 97.1 132 37.9
Solyc04g026200.3 Solanum lycopersicum HOM05D001292 ORTHO05D001202 1.7e-18 97.1 132 37.9
Cpa.g.sc69.25 Carica papaya HOM05D001292 ORTHO05D001202 2.3e-18 96.7 129 35.7
Medtr8g064470 Medicago truncatula HOM05D001292 ORTHO05D001202 2.3e-18 96.7 136 39.7
Glyma.18G137700 Glycine max HOM05D001292 ORTHO05D001202 3.0e-18 96.3 125 37.6
Nitab4.5_0004636g0020 Nicotiana tabacum HOM05D001292 ORTHO05D001202 3.0e-18 96.3 132 37.9
Psat4g125280 Pisum sativum HOM05D001292 ORTHO05D001202 3.0e-18 96.3 132 37.9
Cfa009140 Carpinus fangiana HOM05D001292 ORTHO05D001202 3.9e-18 95.9 127 39.4
FvH4_4g34560 Fragaria vesca HOM05D001292 ORTHO05D001202 3.9e-18 95.9 148 36.5
SEGI_12549 Sequoiadendron giganteum HOM05D001292 ORTHO05D001202 3.9e-18 95.9 125 40.8
SGA_v2.0_scaffold165G38250 Striga asiatica HOM05D001292 ORTHO05D001202 3.9e-18 95.9 135 37.8
Migut.L01409 Erythranthe guttata HOM05D001292 ORTHO05D001202 5.1e-18 95.5 129 37.2
Manes.12G029500 Manihot esculenta HOM05D001292 ORTHO05D001202 5.1e-18 95.5 135 34.8
Lj4g0026951 Lotus japonicus HOM05D001292 ORTHO05D001202 6.6e-18 95.1 132 36.4
TPR.G32100 Trifolium pratense HOM05D001292 ORTHO05D001202 6.6e-18 95.1 176 33.5
CAN.G376.11 Capsicum annuum HOM05D001292 ORTHO05D001202 1.5e-17 94.0 132 38.6
Peaxi162Scf00338g00116 Petunia axillaris HOM05D001292 ORTHO05D001202 1.5e-17 94.0 134 35.8
MBI16_g36056_MAGBIO Magnolia biondii HOM05D001292 ORTHO05D001202 1.9e-17 93.6 138 37.0
MSTRG.597 Avicennia marina HOM05D001292 ORTHO05D001202 2.5e-17 93.2 135 36.3
Sp1g09220 Schrenkiella parvula HOM05D001292 ORTHO05D001202 2.5e-17 93.2 135 38.5
Rhsim12G0121000 Rhododendron simsii HOM05D001292 ORTHO05D001202 3.3e-17 92.8 133 37.6
DCAR_007092 Daucus carota HOM05D001292 ORTHO05D001202 4.3e-17 92.4 128 36.7
Os12g0606900 Oryza sativa ssp. japonica HOM05D001292 ORTHO05D001202 5.6e-17 92.0 127 36.2
RcHm_v2.0_Chr4g0443941 Rosa chinensis HOM05D001292 ORTHO05D001202 7.3e-17 91.7 150 32.7
A06p07320 Brassica napus HOM05D001292 ORTHO05D001202 9.6e-17 91.3 132 40.2
BraA06t23937Z Brassica rapa HOM05D001292 ORTHO05D001202 9.6e-17 91.3 132 40.2
Sopen05g001630 Solanum pennellii HOM05D001292 ORTHO05D001202 9.6e-17 91.3 132 37.1
Dinv15305 Davidia involucrata HOM05D001292 ORTHO05D001202 1.3e-16 90.9 136 37.5
QL03p061415 Quercus lobata HOM05D001292 ORTHO05D001202 1.3e-16 90.9 157 35.7
unitig_26.g10341 Utricularia gibba HOM05D001292 ORTHO05D001202 1.6e-16 90.5 121 39.7
AT1G60220 Arabidopsis thaliana HOM05D001292 ORTHO05D001202 2.1e-16 90.1 132 36.4
CAN.G60.9 Capsicum annuum HOM05D001292 ORTHO05D001202 2.1e-16 90.1 129 35.7
CDE06G2008 Ceratophyllum demersum HOM05D001292 ORTHO05D001202 3.6e-16 89.4 137 36.5
BolC5t29630H Brassica oleracea HOM05D001292 ORTHO05D001202 4.8e-16 89.0 131 40.5
HPP92_008297 Vanilla planifolia HOM05D001292 ORTHO05D001202 4.8e-16 89.0 133 35.3
C05p08830 Brassica napus HOM05D001292 ORTHO05D001202 6.2e-16 88.6 132 38.6
CARHR010730 Cardamine hirsuta HOM05D001292 ORTHO05D001202 6.2e-16 88.6 128 39.1
Eucgr.H02612 Eucalyptus grandis HOM05D001292 ORTHO05D001202 6.2e-16 88.6 160 32.5
AL2G16440 Arabidopsis lyrata HOM05D001292 ORTHO05D001202 8.1e-16 88.2 132 35.6
AL1G21390 Arabidopsis lyrata HOM05D001292 ORTHO05D001202 1.1e-15 87.8 133 33.1
Actinidia15043 Actinidia chinensis HOM05D001292 ORTHO05D001202 1.4e-15 87.4 172 32.6
Aqoxy3G02988 Aquilegia oxysepala HOM05D001292 ORTHO05D001202 1.4e-15 87.4 135 31.9
HPP92_020276 Vanilla planifolia HOM05D001292 ORTHO05D001202 1.4e-15 87.4 134 32.8
BcaC05g24868 Brassica carinata HOM05D001292 ORTHO05D001202 1.8e-15 87.0 134 38.8
Thhalv10007260m.g Eutrema salsugineum HOM05D001292 ORTHO05D001202 1.8e-15 87.0 135 37.0
Thhalv10023376m.g Eutrema salsugineum HOM05D001292 ORTHO05D001202 1.8e-15 87.0 135 34.1
AT1G10570 Arabidopsis thaliana HOM05D001292 ORTHO05D001202 2.4e-15 86.7 133 33.8
CDE04G1081 Ceratophyllum demersum HOM05D001292 ORTHO05D001202 3.1e-15 86.3 137 35.0
A02p26940 Brassica napus HOM05D001292 ORTHO05D001202 4.0e-15 85.9 154 33.1
BraA02t07707Z Brassica rapa HOM05D001292 ORTHO05D001202 4.0e-15 85.9 154 33.1
CARHR052740 Cardamine hirsuta HOM05D001292 ORTHO05D001202 4.0e-15 85.9 138 33.3
Aa31LG2G10100 Aethionema arabicum HOM05D001292 ORTHO05D001202 5.3e-15 85.5 136 34.6
Carub.0001s1001 Capsella rubella HOM05D001292 ORTHO05D001202 5.3e-15 85.5 124 34.7
Zm00001eb031350 Zea mays HOM05D001292 ORTHO05D001202 9.0e-15 84.7 109 37.6
BcaC05g24936 Brassica carinata HOM05D001292 ORTHO05D001202 1.2e-14 84.3 132 37.1
Carub.0002s0503 Capsella rubella HOM05D001292 ORTHO05D001202 1.2e-14 84.3 129 34.9
PGR119G2170 Punica granatum HOM05D001292 ORTHO05D001202 1.5e-14 84.0 180 31.7
A09p17630 Brassica napus HOM05D001292 ORTHO05D001202 4.5e-14 82.4 130 33.8
Os06g0487900 Oryza sativa ssp. japonica HOM05D001292 ORTHO05D001202 4.5e-14 82.4 160 30.0
Sp2g04460 Schrenkiella parvula HOM05D001292 ORTHO05D001202 4.5e-14 82.4 129 33.3
SpUn0106_0010 Schrenkiella parvula HOM05D001292 ORTHO05D001202 4.5e-14 82.4 129 33.3
BcaC04g22220 Brassica carinata HOM05D001292 ORTHO05D001202 9.9e-14 81.3 172 30.2
C09p21960 Brassica napus HOM05D001292 ORTHO05D001202 9.9e-14 81.3 172 30.2
BolC9t55101H Brassica oleracea HOM05D001292 ORTHO05D001202 9.9e-14 81.3 172 30.2
BraA09t37393Z Brassica rapa HOM05D001292 ORTHO05D001202 1.7e-13 80.5 172 31.4
Aa31LG1G4360 Aethionema arabicum HOM05D001292 ORTHO05D001202 2.9e-13 79.7 135 34.1
Ah.03g132660 Amaranthus hybridus HOM05D001292 ORTHO05D001202 3.8e-13 79.3 129 37.2
BcaB07g31205 Brassica carinata HOM05D001292 ORTHO05D001202 8.4e-13 78.2 171 29.2
EL10Ac6g13669 Beta vulgaris HOM05D001292 ORTHO05D001202 1.1e-12 77.8 159 30.2
SMO347G0330 Selaginella moellendorffii HOM05D001292 ORTHO05D001202 1.4e-12 77.4 113 36.3
Solyc05g005630.4 Solanum lycopersicum HOM05D001292 ORTHO05D001202 1.9e-12 77.0 107 39.3
Sabra10G0026500 Salix brachista HOM05D001292 ORTHO05D001202 3.2e-12 76.3 64 48.4
FAN22G1387 Fragaria x ananassa HOM05D001292 ORTHO05D001202 7.1e-12 75.1 85 41.2
Glyma.08G287700 Glycine max HOM05D001292 ORTHO05D001202 9.3e-12 74.7 78 41.0
RcHm_v2.0_Chr3g0455541 Rosa chinensis HOM05D001292 ORTHO05D001202 9.3e-12 74.7 95 42.1
AUR62005372 Chenopodium quinoa HOM05D001292 ORTHO05D001202 1.6e-11 73.9 60 50.0
Lsat_1_v5_gn_8_157321 Lactuca sativa HOM05D001292 ORTHO05D001202 6.0e-11 72.0 80 43.8
Os01g0738100 Oryza sativa ssp. japonica HOM05D001292 ORTHO05D001202 1.3e-10 70.9 67 41.8
Ah.02g129900 Amaranthus hybridus HOM05D001292 ORTHO05D001202 1.5e-09 67.4 105 29.5
Mapoly0025s0054 Marchantia polymorpha HOM05D001292 ORTHO05D001202 5.6e-09 65.5 116 34.5
Pp3c5_19870 Physcomitrium patens HOM05D001292 ORTHO05D001202 7.4e-09 65.1 167 27.5
AagrBONN_evm.TU.Sc2ySwM_228.281 Anthoceros agrestis HOM05D001292 ORTHO05D001202 1.3e-08 64.3 158 28.5
SEGI_13379 Sequoiadendron giganteum HOM05D001292 ORTHO05D001202 1.3e-08 64.3 69 39.1
HanXRQChr10g0289961 Helianthus annuus HOM05D001292 ORTHO05D001202 2.1e-08 63.5 117 33.3
SMO361G0085 Selaginella moellendorffii HOM05D001292 ORTHO05D001202 6.2e-08 62.0 149 27.5
Pp3c17_2400 Physcomitrium patens HOM05D001292 ORTHO05D001202 1.4e-07 60.8 161 28.0
Pp3c15_7620 Physcomitrium patens HOM05D001292 ORTHO05D001202 1.8e-07 60.5 121 33.9
TPR.G9503 Trifolium pratense HOM05D001292 ORTHO05D001202 1.8e-07 60.5 129 27.9
VMungo0540G0648 Vigna mungo HOM05D001292 ORTHO05D001202 2.4e-07 60.1 130 27.7
Phvul.006G202100 Phaseolus vulgaris HOM05D001292 ORTHO05D001202 3.1e-07 59.7 125 25.6
Medtr2g009580 Medicago truncatula HOM05D001292 ORTHO05D001202 5.3e-07 58.9 76 32.9
Psat1g215560 Pisum sativum HOM05D001292 ORTHO05D001202 5.3e-07 58.9 166 25.9
Ca_00162_v3 Cicer arietinum L. HOM05D001292 ORTHO05D001202 6.9e-07 58.5 85 30.6
Lsat_1_v5_gn_5_109800 Lactuca sativa HOM05D001292 ORTHO05D001202 6.9e-07 58.5 70 38.6
MBI07_g34624_MAGBIO Magnolia biondii HOM05D001292 ORTHO05D001202 6.9e-07 58.5 127 28.3
Sabra17G0029900 Salix brachista HOM05D001292 ORTHO05D001202 6.9e-07 58.5 128 28.1
Glyma.13G256800 Glycine max HOM05D001292 ORTHO05D001202 9.0e-07 58.2 127 26.0
Pp3c25_7310 Physcomitrium patens HOM05D001292 ORTHO05D001202 9.0e-07 58.2 126 28.6
Peaxi162Scf00299g00720 Petunia axillaris HOM05D001292 ORTHO05D001202 1.2e-06 57.8 121 28.9
vmacro04653 Vaccinium macrocarpon HOM05D001292 ORTHO05D001202 1.5e-06 57.4 74 33.8
Pp3c9_4420 Physcomitrium patens HOM05D001292 ORTHO05D001202 2.0e-06 57.0 136 26.5
ECA234G2749 Erigeron canadensis HOM05D001292 ORTHO05D001202 2.6e-06 56.6 143 27.3
Nn5g29887 Nelumbo nucifera HOM05D001292 ORTHO05D001202 2.6e-06 56.6 124 29.8
Potri.017G044000 Populus trichocarpa HOM05D001292 ORTHO05D001202 2.6e-06 56.6 128 27.3
Sopen01g048280 Solanum pennellii HOM05D001292 ORTHO05D001202 2.6e-06 56.6 124 28.2
Manes.10G098700 Manihot esculenta HOM05D001292 ORTHO05D001202 3.4e-06 56.2 104 29.8
Rhsim07G0211800 Rhododendron simsii HOM05D001292 ORTHO05D001202 3.4e-06 56.2 119 28.6
Thecc.02G129400 Theobroma cacao HOM05D001292 ORTHO05D001202 3.4e-06 56.2 122 26.2
CAN.G523.11 Capsicum annuum HOM05D001292 ORTHO05D001202 4.5e-06 55.8 146 27.4
Cc00_g07670 Coffea canephora HOM05D001292 ORTHO05D001202 4.5e-06 55.8 140 26.4
Duzib248G0868 Durio zibethinus HOM05D001292 ORTHO05D001202 4.5e-06 55.8 122 27.0
Sp7g31340 Schrenkiella parvula HOM05D001292 ORTHO05D001202 4.5e-06 55.8 159 25.2
SEGI_20117 Sequoiadendron giganteum HOM05D001292 ORTHO05D006349 4.5e-06 55.8 121 34.7
SEGI_23287 Sequoiadendron giganteum HOM05D001292 ORTHO05D006349 4.5e-06 55.8 121 34.7
unitig_744.g24188 Utricularia gibba HOM05D001292 ORTHO05D001202 4.5e-06 55.8 194 27.8
A01p04700 Brassica napus HOM05D001292 ORTHO05D001202 5.8e-06 55.5 154 26.6
BraA01t00453Z Brassica rapa HOM05D001292 ORTHO05D001202 5.8e-06 55.5 154 26.6
Potri.007G115400 Populus trichocarpa HOM05D001292 ORTHO05D001202 5.8e-06 55.5 122 25.4
Actinidia29624 Actinidia chinensis HOM05D001292 ORTHO05D001202 7.6e-06 55.1 125 30.4
BcaC09g52173 Brassica carinata HOM05D001292 ORTHO05D001202 7.6e-06 55.1 154 26.6
C01p05090 Brassica napus HOM05D001292 ORTHO05D001202 7.6e-06 55.1 154 26.6
BolC1t00491H Brassica oleracea HOM05D001292 ORTHO05D001202 7.6e-06 55.1 154 26.6
Dinv15996 Davidia involucrata HOM05D001292 ORTHO05D001202 7.6e-06 55.1 127 27.6
FvH4_5g35390 Fragaria vesca HOM05D001292 ORTHO05D001202 7.6e-06 55.1 123 26.0
FAN08G0616 Fragaria x ananassa HOM05D001292 ORTHO05D001202 7.6e-06 55.1 123 26.0
FAN13G3173 Fragaria x ananassa HOM05D001292 ORTHO05D001202 7.6e-06 55.1 123 26.0
FAN18G2083 Fragaria x ananassa HOM05D001292 ORTHO05D001202 7.6e-06 55.1 123 26.0
Glyma.15G058100 Glycine max HOM05D001292 ORTHO05D001202 7.6e-06 55.1 116 27.6
MBI02_g18696_MAGBIO Magnolia biondii HOM05D001292 ORTHO05D001202 7.6e-06 55.1 69 30.4
CSS0010703 Camellia sinensis var. sinensis HOM05D001292 ORTHO05D001202 9.9e-06 54.7 125 30.4
MBI16_g27584_MAGBIO Magnolia biondii HOM05D001292 ORTHO05D001202 9.9e-06 54.7 76 32.9
Manes.07G038300 Manihot esculenta HOM05D001292 ORTHO05D001202 9.9e-06 54.7 90 26.7
RcHm_v2.0_Chr6g0271021 Rosa chinensis HOM05D001292 ORTHO05D001202 9.9e-06 54.7 124 30.6


User provided reference genes

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