Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3551 Erigeron canadensis HOM05D003792 ORTHO05D003195 2.7e-132 475.3 237 100.0
Lsat_1_v5_gn_4_125741 Lactuca sativa HOM05D003792 ORTHO05D003195 6.8e-59 231.5 212 63.2
HanXRQChr09g0267581 Helianthus annuus HOM05D003792 ORTHO05D003195 7.2e-53 211.5 219 58.0
ECA246G0047 Erigeron canadensis HOM05D003792 ORTHO05D003195 1.3e-38 164.1 189 48.7
HanXRQChr14g0439641 Helianthus annuus HOM05D003792 ORTHO05D003195 5.4e-32 142.1 238 47.1
Lsat_1_v5_gn_6_111920 Lactuca sativa HOM05D003792 ORTHO05D003195 7.1e-32 141.7 190 46.8
Dinv39314 Davidia involucrata HOM05D003792 ORTHO05D003195 3.0e-30 136.3 249 41.0
Dinv35957 Davidia involucrata HOM05D003792 ORTHO05D003195 5.1e-30 135.6 230 40.9
CSS0021091 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.5e-29 134.0 248 39.5
DCAR_019451 Daucus carota HOM05D003792 ORTHO05D003195 4.7e-28 129.0 212 39.2
HanXRQChr05g0150801 Helianthus annuus HOM05D003792 ORTHO05D003195 6.2e-28 128.6 198 42.9
MSTRG.24332 Avicennia marina HOM05D003792 ORTHO05D003195 8.1e-28 128.3 214 39.3
Rhsim06G0050200 Rhododendron simsii HOM05D003792 ORTHO05D003195 3.1e-27 126.3 204 41.7
Oeu012963.1 Olea europaea HOM05D003792 ORTHO05D003195 2.6e-26 123.2 205 44.9
GSVIVG01009490001 Vitis vinifera HOM05D003792 ORTHO05D003195 5.8e-26 122.1 221 40.7
vmacro21518 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 7.6e-26 121.7 226 38.5
Thecc.08G006700 Theobroma cacao HOM05D003792 ORTHO05D003195 2.9e-25 119.8 220 38.6
Actinidia22631 Actinidia chinensis HOM05D003792 ORTHO05D003195 8.3e-25 118.2 237 37.6
FvH4_2g34400 Fragaria vesca HOM05D003792 ORTHO05D003195 3.2e-24 116.3 206 38.8
FAN15G1261 Fragaria x ananassa HOM05D003792 ORTHO05D003195 3.2e-24 116.3 206 38.8
Manes.18G037600 Manihot esculenta HOM05D003792 ORTHO05D003195 4.1e-24 115.9 203 41.4
QL02p004753 Quercus lobata HOM05D003792 ORTHO05D003195 7.1e-24 115.2 224 37.5
PGSC0003DMG402007970 Solanum tuberosum HOM05D003792 ORTHO05D003195 7.1e-24 115.2 209 39.2
Actinidia23277 Actinidia chinensis HOM05D003792 ORTHO05D003195 1.6e-23 114.0 253 36.4
Peaxi162Scf00252g00410 Petunia axillaris HOM05D003792 ORTHO05D003195 3.5e-23 112.8 192 37.5
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 6.0e-23 112.1 209 37.3
Sopen04g032480 Solanum pennellii HOM05D003792 ORTHO05D003195 1.7e-22 110.5 206 38.8
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 2.3e-22 110.2 222 36.5
MD15G1082300 Malus domestica HOM05D003792 ORTHO05D003195 3.0e-22 109.8 210 37.6
Gohir.A06G018700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 3.9e-22 109.4 210 39.5
MD08G1101100 Malus domestica HOM05D003792 ORTHO05D003195 6.6e-22 108.6 206 36.9
Duzib093G2220 Durio zibethinus HOM05D003792 ORTHO05D003195 8.6e-22 108.2 220 35.9
Phvul.001G022200 Phaseolus vulgaris HOM05D003792 ORTHO05D003195 8.6e-22 108.2 199 35.7
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 8.6e-22 108.2 248 35.9
Prupe.1G435100 Prunus persica HOM05D003792 ORTHO05D003195 1.1e-21 107.8 211 37.4
VMungo0647G0635 Vigna mungo HOM05D003792 ORTHO05D003195 1.1e-21 107.8 195 38.5
Actinidia38059 Actinidia chinensis HOM05D004168 ORTHO05D004999 1.5e-21 107.5 211 38.9
Nitab4.5_0000287g0270 Nicotiana tabacum HOM05D003792 ORTHO05D003195 1.9e-21 107.1 209 37.8
COL.COLO4_26514 Corchorus olitorius HOM05D003792 ORTHO05D003195 2.5e-21 106.7 203 36.5
Cfa018558 Carpinus fangiana HOM05D000207 ORTHO05D000606 4.3e-21 105.9 231 38.5
Solyc04g078880.3 Solanum lycopersicum HOM05D003792 ORTHO05D003195 4.3e-21 105.9 221 35.7
TWI36G1706 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 4.3e-21 105.9 230 35.7
Potri.014G029000 Populus trichocarpa HOM05D003792 ORTHO05D003195 9.6e-21 104.8 239 35.6
MSTRG.25091 Avicennia marina HOM05D003792 ORTHO05D003195 1.2e-20 104.4 216 34.3
Glyma.17G242100 Glycine max HOM05D003792 ORTHO05D003195 1.2e-20 104.4 215 34.4
Gorai.010G020000 Gossypium raimondii HOM05D003792 ORTHO05D003195 1.2e-20 104.4 204 38.2
Gohir.D05G205900 Gossypium hirsutum HOM05D003792 ORTHO05D003195 2.8e-20 103.2 166 39.8
Cc10_g04110 Coffea canephora HOM05D003792 ORTHO05D003195 3.6e-20 102.8 197 36.5
Glyma.14G083000 Glycine max HOM05D003792 ORTHO05D003195 3.6e-20 102.8 197 36.0
Gohir.D06G017100 Gossypium hirsutum HOM05D003792 ORTHO05D003195 3.6e-20 102.8 204 38.2
Nitab4.5_0002760g0070 Nicotiana tabacum HOM05D003792 ORTHO05D003195 3.6e-20 102.8 219 37.4
PGR031G0673 Punica granatum HOM05D003792 ORTHO05D003195 3.6e-20 102.8 202 38.1
Eucgr.F00223 Eucalyptus grandis HOM05D003792 ORTHO05D003195 6.2e-20 102.1 198 37.4
Gorai.009G212200 Gossypium raimondii HOM05D003792 ORTHO05D003195 6.2e-20 102.1 166 39.2
Duzib116G0066 Durio zibethinus HOM05D003792 ORTHO05D003195 1.4e-19 100.9 216 36.6
CiPaw.16G043500 Carya illinoinensis HOM05D003792 ORTHO05D003195 1.8e-19 100.5 200 38.0
Aqoxy6G01313 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 2.4e-19 100.1 236 34.7
Migut.N02709 Erythranthe guttata HOM05D003792 ORTHO05D003195 2.4e-19 100.1 209 40.2
TAR628G0921 Trochodendron aralioides HOM05D003792 ORTHO05D003195 3.1e-19 99.8 216 36.1
GSVIVG01024176001 Vitis vinifera HOM05D003792 ORTHO05D003195 3.1e-19 99.8 201 34.3
Lalb_Chr14g0368651 Lupinus albus HOM05D003792 ORTHO05D003195 4.0e-19 99.4 186 37.1
Lalb_Chr22g0355111 Lupinus albus HOM05D003792 ORTHO05D003195 4.0e-19 99.4 188 36.7
Rhsim07G0228200 Rhododendron simsii HOM05D003792 ORTHO05D003195 4.0e-19 99.4 265 30.9
TWI36G0999 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 4.0e-19 99.4 230 35.7
TAR376G0615 Trochodendron aralioides HOM05D003792 ORTHO05D003195 5.2e-19 99.0 206 36.4
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 8.9e-19 98.2 212 35.4
Sabra14G0019900 Salix brachista HOM05D003792 ORTHO05D003195 2.6e-18 96.7 240 32.5
arahy.Tifrunner.gnm1.ann1.ND8QY1 Arachis hypogaea HOM05D003792 ORTHO05D003195 3.4e-18 96.3 226 34.5
arahy.Tifrunner.gnm1.ann1.V1SQNE Arachis hypogaea HOM05D003792 ORTHO05D003195 3.4e-18 96.3 226 34.5
CiPaw.15G055900 Carya illinoinensis HOM05D003792 ORTHO05D003195 3.4e-18 96.3 202 36.6
Gohir.A05G202700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 3.4e-18 96.3 166 38.6
Medtr1g019360 Medicago truncatula HOM05D003792 ORTHO05D003195 4.4e-18 95.9 179 36.9
Hund23000 Selenicereus undatus HOM05D003792 ORTHO05D003195 7.6e-18 95.1 177 39.0
TPR.G3791 Trifolium pratense HOM05D003792 ORTHO05D003195 7.6e-18 95.1 187 38.0
Cpa.g.sc49.18 Carica papaya HOM05D003792 ORTHO05D003195 9.9e-18 94.7 103 48.5
SalBow7G2289 Salvia bowleyana HOM05D003792 ORTHO05D003195 1.4e-16 90.9 208 33.7
CANSAT25G2784 Cannabis sativa HOM05D003792 ORTHO05D003195 9.3e-16 88.2 202 34.2
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 9.3e-16 88.2 202 34.2
CDE04G2954 Ceratophyllum demersum HOM05D000925 ORTHO05D002746 1.6e-15 87.4 221 33.5
Ciclev10002531m.g Citrus clementina HOM05D003792 ORTHO05D003195 2.7e-15 86.7 182 36.3
Haze_17521 Corylus avellana HOM05D000207 ORTHO05D000606 1.0e-14 84.7 230 36.1
Actinidia00436 Actinidia chinensis HOM05D003792 ORTHO05D003195 1.3e-14 84.3 238 30.3
Actinidia29872 Actinidia chinensis HOM05D004168 ORTHO05D004999 1.3e-14 84.3 219 30.6
MELO3C016754.2 Cucumis melo HOM05D003792 ORTHO05D003195 1.7e-14 84.0 171 35.7
CsaV3_4G034340 Cucumis sativus L. HOM05D003792 ORTHO05D003195 1.7e-14 84.0 229 31.4
Sc15g0006120 Simmondsia chinensis HOM05D004168 ORTHO05D003195 1.7e-14 84.0 182 35.2
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.7e-14 84.0 227 28.2
Psat6g012520 Pisum sativum HOM05D003792 ORTHO05D003195 2.3e-14 83.6 181 32.6
MBI03_g13463_MAGBIO Magnolia biondii HOM05D003792 ORTHO05D003195 3.9e-14 82.8 188 34.6
Sc02g0007160 Simmondsia chinensis HOM05D003792 ORTHO05D003195 3.9e-14 82.8 217 34.1
Gohir.A01G120000 Gossypium hirsutum HOM05D003792 ORTHO05D003195 5.1e-14 82.4 180 32.2
Gohir.D01G108300 Gossypium hirsutum HOM05D003792 ORTHO05D003195 8.7e-14 81.6 191 33.0
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 1.1e-13 81.3 240 33.3
ClCG05G019900 Citrullus lanatus HOM05D004168 ORTHO05D004999 1.5e-13 80.9 213 33.8
Gorai.002G132500 Gossypium raimondii HOM05D003792 ORTHO05D003195 1.9e-13 80.5 218 30.7
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 3.3e-13 79.7 231 31.2
Sabra02G0098600 Salix brachista HOM05D000207 ORTHO05D003195 4.3e-13 79.3 206 34.0
Sed0003020 Sechium edule HOM05D003792 ORTHO05D003195 4.3e-13 79.3 214 30.8
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 7.3e-13 78.6 220 32.3
Haze_10092 Corylus avellana HOM05D003792 ORTHO05D003195 7.3e-13 78.6 209 31.1
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 9.6e-13 78.2 231 31.6
Oeu049982.1 Olea europaea HOM05D003792 ORTHO05D003195 1.3e-12 77.8 170 34.1
Nn5g30305 Nelumbo nucifera HOM05D003792 ORTHO05D003195 1.6e-12 77.4 196 30.1
AT5G42900 Arabidopsis thaliana HOM05D003792 ORTHO05D003195 2.1e-12 77.0 223 33.2
MD05G1081700 Malus domestica HOM05D003792 ORTHO05D003195 2.1e-12 77.0 197 30.5
Ah.11g043080 Amaranthus hybridus HOM05D003792 ORTHO05D003195 2.8e-12 76.6 124 41.1
EL10As7g23733 Beta vulgaris HOM05D003792 ORTHO05D003195 3.6e-12 76.3 225 32.4
THA.LOC104822850 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 3.6e-12 76.3 233 30.5
A06p48190 Brassica napus HOM05D003792 ORTHO05D003195 4.8e-12 75.9 233 33.5
Aa31LG9G12960 Aethionema arabicum HOM05D003792 ORTHO05D003195 8.1e-12 75.1 230 33.0
Manes.10G080100 Manihot esculenta HOM05D003792 ORTHO05D003195 1.1e-11 74.7 156 35.9
PGR083G2840 Punica granatum HOM05D003792 ORTHO05D003195 1.1e-11 74.7 177 36.2
Lj5g0016368 Lotus japonicus HOM05D003792 ORTHO05D003195 1.4e-11 74.3 201 32.3
CDE08G1351 Ceratophyllum demersum HOM05D003792 ORTHO05D003195 2.4e-11 73.6 90 41.1
C04p25040 Brassica napus HOM05D003792 ORTHO05D003195 4.0e-11 72.8 227 33.5
BolC4t24005H Brassica oleracea HOM05D003792 ORTHO05D003195 4.0e-11 72.8 227 33.5
Carub.0008s0601 Capsella rubella HOM05D003792 ORTHO05D003195 4.0e-11 72.8 226 33.6
AUR62042730 Chenopodium quinoa HOM05D043499 ORTHO05D003195 5.3e-11 72.4 203 34.0
THA.LOC104812575 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 6.9e-11 72.0 226 28.3
SGA_v2.0_scaffold28G11774 Striga asiatica HOM05D000207 ORTHO05D000606 9.0e-11 71.6 210 30.5
AL8G18050 Arabidopsis lyrata HOM05D003792 ORTHO05D003195 1.2e-10 71.2 208 32.2
BcaB07g31033 Brassica carinata HOM05D003792 ORTHO05D003195 1.2e-10 71.2 192 32.3
Gohir.A12G023800 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.2e-10 71.2 187 31.6
Sp2g07640 Schrenkiella parvula HOM05D003792 ORTHO05D003195 1.2e-10 71.2 229 31.9
SpUn0117_0010 Schrenkiella parvula HOM05D003792 ORTHO05D003195 1.2e-10 71.2 229 31.9
BcaC02g10794 Brassica carinata HOM05D003792 ORTHO05D003195 1.5e-10 70.9 226 33.6
BolC9t55450H Brassica oleracea HOM05D003792 ORTHO05D003195 1.5e-10 70.9 205 31.7
vmacro02043 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 3.4e-10 69.7 106 40.6
Gorai.008G024800 Gossypium raimondii HOM05D003792 ORTHO05D003195 4.4e-10 69.3 203 28.6
Gohir.A01G007200 Gossypium hirsutum HOM05D003792 ORTHO05D003195 5.8e-10 68.9 225 28.4
Gohir.D12G024500 Gossypium hirsutum HOM05D003792 ORTHO05D003195 5.8e-10 68.9 203 28.6
SEGI_08793 Sequoiadendron giganteum HOM05D019663 ORTHO05D003195 5.8e-10 68.9 119 37.8
BcaB03g11864 Brassica carinata HOM05D009953 ORTHO05D003195 9.9e-10 68.2 179 33.0
BcaC06g31740 Brassica carinata HOM05D003792 ORTHO05D003195 9.9e-10 68.2 202 33.7
Ciclev10029147m.g Citrus clementina HOM05D003792 ORTHO05D003195 9.9e-10 68.2 202 31.7
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 9.9e-10 68.2 130 30.8
BraA06t27688Z Brassica rapa HOM05D003792 ORTHO05D003195 1.3e-09 67.8 125 40.8
Nn1g04847 Nelumbo nucifera HOM05D003792 ORTHO05D003195 1.7e-09 67.4 190 32.1
Thhalv10003264m.g Eutrema salsugineum HOM05D003792 ORTHO05D003195 2.9e-09 66.6 240 31.7
CARHR242110 Cardamine hirsuta HOM05D009953 ORTHO05D003195 4.9e-09 65.9 189 29.6
Duzib248G0608 Durio zibethinus HOM05D003792 ORTHO05D003195 4.9e-09 65.9 230 30.4
Prupe.8G126300 Prunus persica HOM05D003792 ORTHO05D003195 4.9e-09 65.9 114 36.0
Sp7g31720 Schrenkiella parvula HOM05D009953 ORTHO05D003195 4.9e-09 65.9 227 25.1
Cpa.g.sc62.6 Carica papaya HOM05D003792 ORTHO05D003195 6.4e-09 65.5 217 25.8
Os03g0184100 Oryza sativa ssp. japonica HOM05D003792 ORTHO05D003195 6.4e-09 65.5 192 29.2
THA.LOC104819577 Tarenaya hassleriana HOM05D009953 ORTHO05D003195 6.4e-09 65.5 213 27.2
Aa31LG2G16400 Aethionema arabicum HOM05D009953 ORTHO05D003195 1.1e-08 64.7 228 30.3
Carub.0007s0642 Capsella rubella HOM05D009953 ORTHO05D003195 1.9e-08 63.9 196 29.6
Rhsim11G0165200 Rhododendron simsii HOM05D003792 ORTHO05D003195 1.9e-08 63.9 206 29.1
Oeu025580.1 Olea europaea HOM05D003792 ORTHO05D003195 5.4e-08 62.4 214 28.5
A09p20080 Brassica napus HOM05D003792 ORTHO05D003195 7.1e-08 62.0 212 30.2
BraA09t37621Z Brassica rapa HOM05D003792 ORTHO05D003195 7.1e-08 62.0 212 30.2
AL7G17410 Arabidopsis lyrata HOM05D009953 ORTHO05D003195 9.3e-08 61.6 189 31.2
C07p60100 Brassica napus HOM05D009953 ORTHO05D003195 9.3e-08 61.6 201 27.9
BolC7t46450H Brassica oleracea HOM05D009953 ORTHO05D003195 9.3e-08 61.6 201 27.9
SGA_v2.0_scaffold14G07003 Striga asiatica HOM05D000207 ORTHO05D000606 9.3e-08 61.6 108 38.9
BcaNung03354 Brassica carinata HOM05D000546 ORTHO05D000398 1.2e-07 61.2 213 28.2
CiPaw.05G007500 Carya illinoinensis HOM05D003792 ORTHO05D003195 1.2e-07 61.2 126 35.7
BcaC01g00943 Brassica carinata HOM05D009953 ORTHO05D003195 1.6e-07 60.8 202 28.2
A03p62520 Brassica napus HOM05D009953 ORTHO05D003195 2.7e-07 60.1 201 28.4
CSS0015140 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 3.5e-07 59.7 198 29.3
Migut.C00575 Erythranthe guttata HOM05D003792 ORTHO05D003195 3.5e-07 59.7 208 30.8
BraA03t15320Z Brassica rapa HOM05D009953 ORTHO05D003195 4.6e-07 59.3 202 30.7
BcaNung03785 Brassica carinata HOM05D009953 ORTHO05D003195 6.0e-07 58.9 207 30.0
Zm00001eb006310 Zea mays HOM05D003792 ORTHO05D003195 6.0e-07 58.9 181 28.2
BcaC04g21959 Brassica carinata HOM05D003792 ORTHO05D003195 7.9e-07 58.5 202 31.2
vmacro04447 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 7.9e-07 58.5 118 35.6
C03p86190 Brassica napus HOM05D009953 ORTHO05D003195 1.7e-06 57.4 212 27.4
SEGI_40396 Sequoiadendron giganteum HOM05D003792 ORTHO05D003195 1.7e-06 57.4 129 38.8
Lj4g0023306 Lotus japonicus HOM05D003792 ORTHO05D003195 2.3e-06 57.0 201 26.4
Thhalv10026267m.g Eutrema salsugineum HOM05D009953 ORTHO05D003195 3.0e-06 56.6 194 30.4
PGSC0003DMG400006224 Solanum tuberosum HOM05D011234 ORTHO05D003195 3.0e-06 56.6 187 29.4
THA.LOC104814167 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 3.0e-06 56.6 236 29.2
PSO170G6463 Papaver somniferum HOM05D003792 ORTHO05D003195 3.9e-06 56.2 217 30.4
Glyma.07G213000 Glycine max HOM05D003792 ORTHO05D003195 5.1e-06 55.8 188 27.7
Aqoxy5G01231 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 6.6e-06 55.5 215 29.3
AT4G33980 Arabidopsis thaliana HOM05D009953 ORTHO05D003195 6.6e-06 55.5 96 37.5
Sp7g31710 Schrenkiella parvula HOM05D009953 ORTHO05D003195 6.6e-06 55.5 195 29.2
BolC3t20907H Brassica oleracea HOM05D009953 ORTHO05D003195 8.7e-06 55.1 199 27.1


User provided reference genes

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