Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 1.1e-229 799.7 420 100.0
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 8.3e-177 624.0 391 83.1
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 2.9e-161 572.4 390 77.2
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 2.4e-152 542.7 397 69.5
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 2.3e-150 536.2 392 72.4
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 1.5e-149 533.5 424 67.7
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 5.6e-149 531.6 425 67.3
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 7.3e-149 531.2 425 67.3
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 1.6e-148 530.0 397 69.0
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 1.1e-147 527.3 434 65.9
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.2e-146 523.9 397 68.3
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 1.5e-146 523.5 390 71.3
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 3.4e-146 522.3 398 68.3
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 1.7e-145 520.0 397 69.0
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 9.3e-144 514.2 392 68.9
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 1.6e-143 513.5 394 69.5
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 2.7e-143 512.7 392 69.4
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 6.0e-143 511.5 429 65.5
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 1.5e-141 506.9 396 67.2
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 1.5e-141 506.9 392 67.6
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 3.1e-139 499.2 431 63.1
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 5.3e-139 498.4 431 62.9
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 5.3e-139 498.4 402 65.9
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 7.6e-138 494.6 393 67.2
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 7.6e-138 494.6 399 66.2
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 1.7e-137 493.4 400 66.5
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 3.8e-137 492.3 400 65.8
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 9.3e-136 487.6 451 60.8
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 3.5e-135 485.7 392 66.8
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 6.0e-135 485.0 394 64.2
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 1.0e-134 484.2 395 66.1
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 1.8e-134 483.4 423 63.8
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 3.0e-134 482.6 394 64.5
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 3.9e-134 482.3 395 65.1
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 6.7e-134 481.5 367 69.5
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 5.6e-133 478.4 392 65.6
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 7.4e-133 478.0 392 65.3
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 7.4e-133 478.0 396 64.1
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 1.3e-132 477.2 392 65.3
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 2.8e-132 476.1 394 66.0
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 6.2e-132 474.9 396 65.2
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 6.2e-132 474.9 394 63.5
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 8.1e-132 474.6 404 63.4
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 1.4e-131 473.8 395 64.8
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 9.0e-131 471.1 395 62.5
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 1.2e-130 470.7 401 63.1
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 2.0e-130 469.9 389 64.0
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 2.6e-130 469.5 396 64.6
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 3.4e-130 469.2 392 63.8
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 5.8e-130 468.4 392 63.3
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 9.9e-130 467.6 396 64.6
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 3.8e-129 465.7 377 67.4
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 4.9e-129 465.3 422 60.2
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 6.4e-129 464.9 395 63.0
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 1.1e-128 464.2 399 64.4
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 4.2e-128 462.2 393 64.1
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.0e-127 458.4 334 70.4
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 2.3e-126 456.4 393 63.4
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 3.9e-126 455.7 390 61.3
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 1.1e-125 454.1 390 61.8
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 1.1e-125 454.1 421 58.7
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 1.5e-125 453.8 390 62.6
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 3.3e-125 452.6 393 60.3
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 3.3e-125 452.6 395 60.8
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 4.3e-125 452.2 475 55.6
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 5.6e-125 451.8 379 62.8
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 9.6e-125 451.1 395 61.5
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 1.6e-124 450.3 371 64.2
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 6.2e-124 448.4 434 59.7
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.9e-120 436.8 423 57.4
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 2.5e-120 436.4 303 74.3
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 9.3e-120 434.5 399 60.7
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 1.6e-119 433.7 397 59.7
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 2.3e-118 429.9 310 73.5
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.1e-117 427.6 398 60.6
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 3.3e-117 426.0 401 58.6
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 4.8e-116 422.2 374 61.0
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 6.3e-116 421.8 423 57.2
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 1.8e-115 420.2 419 57.0
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 3.8e-113 412.5 401 57.9
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 6.5e-113 411.8 397 57.4
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 4.2e-112 409.1 396 55.1
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 5.5e-112 408.7 408 56.1
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 1.9e-109 400.2 346 62.7
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 9.7e-109 397.9 395 57.0
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 1.1e-107 394.4 411 53.0
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 1.2e-103 380.9 407 55.3
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 4.5e-98 362.5 351 55.0
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.2e-97 360.1 328 61.0
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 3.2e-96 356.3 354 52.3
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.6e-95 354.0 373 54.7
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.7e-95 352.4 335 59.1
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 8.0e-95 351.7 337 58.8
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.3e-93 346.3 296 63.5
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.3e-92 342.0 296 62.8
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.3e-92 342.0 296 62.8
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.3e-92 342.0 296 62.8
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 2.4e-91 340.1 398 46.0
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 1.0e-89 334.7 450 43.6
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 7.2e-88 328.6 422 45.0
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 2.2e-84 317.0 325 51.4
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 5.0e-81 305.8 293 55.6
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 2.7e-79 300.1 207 73.9
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 1.4e-78 297.7 281 59.1
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 4.4e-69 266.2 211 65.9
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 3.7e-68 263.1 228 61.0
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 9.5e-64 248.4 302 49.3
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 8.6e-49 198.7 369 35.8
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.3e-33 148.3 180 46.1
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 6.9e-30 136.0 131 55.0
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.0e-29 134.4 82 78.0
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.0e-25 122.1 207 38.6
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 7.3e-24 115.9 149 45.6
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.1e-22 112.1 160 40.0
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.9e-12 76.6 60 71.7
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.9e-12 76.6 60 71.7
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.9e-12 76.6 60 71.7
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 7.4e-08 62.8 44 68.2
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 1.3e-07 62.0 47 57.4


User provided reference genes

Program Settings