Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1631 Erigeron canadensis HOM05D001477 ORTHO05D001182 9.6e-242 839.7 420 100.0
ECA234G3193 Erigeron canadensis HOM05D005830 ORTHO05D007212 7.5e-85 318.5 328 51.5
Dinv37940 Davidia involucrata HOM05D001477 ORTHO05D001182 6.9e-30 136.0 351 30.2
Haze_15913 Corylus avellana HOM05D001477 ORTHO05D001182 7.6e-29 132.5 317 31.2
QL05p016344 Quercus lobata HOM05D001477 ORTHO05D001182 2.2e-28 131.0 327 29.4
Cfa003613 Carpinus fangiana HOM05D001477 ORTHO05D001182 3.0e-25 120.6 337 27.3
Potri.013G146800 Populus trichocarpa HOM05D001477 ORTHO05D001182 1.1e-24 118.6 333 28.5
ClCG07G013540 Citrullus lanatus HOM05D001477 ORTHO05D001182 1.5e-24 118.2 351 27.6
QL93p1866_0198 Quercus lobata HOM05D001477 ORTHO05D001182 7.3e-24 115.9 332 27.7
Actinidia32125 Actinidia chinensis HOM05D000617 ORTHO05D000229 2.8e-23 114.0 388 25.3
Sed0010878 Sechium edule HOM05D001477 ORTHO05D001182 2.8e-23 114.0 335 26.6
Hma1.2p1_2617F.1_g325500 Hydrangea macrophylla HOM05D001477 ORTHO05D001182 6.2e-23 112.8 370 28.6
CsaV3_3G044110 Cucumis sativus L. HOM05D001477 ORTHO05D001182 8.1e-23 112.5 354 26.6
QL05p018582 Quercus lobata HOM05D001477 ORTHO05D001182 8.1e-23 112.5 305 28.9
QL08p037386 Quercus lobata HOM05D001477 ORTHO05D001182 1.1e-22 112.1 328 29.6
Dinv15487 Davidia involucrata HOM05D001477 ORTHO05D001182 1.4e-22 111.7 347 26.5
MD17G1178500 Malus domestica HOM05D001477 ORTHO05D001182 3.1e-22 110.5 281 30.2
COL.COLO4_30594 Corchorus olitorius HOM05D000862 ORTHO05D000943 9.9e-21 105.5 216 32.4
Manes.11G029400 Manihot esculenta HOM05D001477 ORTHO05D001182 1.7e-20 104.8 344 26.7
FvH4_6g32840 Fragaria vesca HOM05D001477 ORTHO05D001182 3.8e-20 103.6 323 26.6
FAN05G3307 Fragaria x ananassa HOM05D000862 ORTHO05D000943 4.9e-20 103.2 356 26.4
Rhsim08G0230500 Rhododendron simsii HOM05D001477 ORTHO05D001182 8.4e-20 102.4 285 27.0
RcHm_v2.0_Chr2g0142131 Rosa chinensis HOM05D001477 ORTHO05D001182 8.4e-20 102.4 319 25.7
FAN14G2250 Fragaria x ananassa HOM05D000862 ORTHO05D000943 1.4e-19 101.7 323 26.3
AUR62023315 Chenopodium quinoa HOM05D001477 ORTHO05D001182 1.9e-19 101.3 314 28.0
Peaxi162Scf00421g00326 Petunia axillaris HOM05D001477 ORTHO05D001182 1.9e-19 101.3 322 25.8
Rhsim06G0151700 Rhododendron simsii HOM05D001477 ORTHO05D001182 2.4e-19 100.9 499 21.8
AUR62023316 Chenopodium quinoa HOM05D001477 ORTHO05D001182 7.1e-19 99.4 330 26.4
Sabra13G0118300 Salix brachista HOM05D001477 ORTHO05D001182 7.1e-19 99.4 344 26.7
Lsat_1_v5_gn_3_39741 Lactuca sativa HOM05D001477 ORTHO05D001182 9.3e-19 99.0 330 24.5
Gorai.009G138900 Gossypium raimondii HOM05D001477 ORTHO05D001182 1.6e-18 98.2 340 28.5
Hma1.2p1_0388F.1_g142450 Hydrangea macrophylla HOM05D001477 ORTHO05D001182 1.6e-18 98.2 331 29.0
CAN.G1124.4 Capsicum annuum HOM05D001477 ORTHO05D001182 4.6e-18 96.7 319 27.6
arahy.Tifrunner.gnm1.ann1.Q9TM1C Arachis hypogaea HOM05D000862 ORTHO05D000943 6.0e-18 96.3 309 27.5
Gohir.D05G135100 Gossypium hirsutum HOM05D001477 ORTHO05D001182 7.9e-18 95.9 294 28.2
CAN.G635.12 Capsicum annuum HOM05D001477 ORTHO05D001182 1.8e-17 94.7 356 27.5
MELO3C013024.2 Cucumis melo HOM05D001477 ORTHO05D001182 1.8e-17 94.7 290 26.9
CSS0009889 Camellia sinensis var. sinensis HOM05D001477 ORTHO05D001182 3.0e-17 94.0 351 27.6
MD09G1197600 Malus domestica HOM05D001477 ORTHO05D001182 3.0e-17 94.0 207 32.9
Haze_03787 Corylus avellana HOM05D001477 ORTHO05D001182 5.1e-17 93.2 337 25.2
arahy.Tifrunner.gnm1.ann1.WE7T8M Arachis hypogaea HOM05D000862 ORTHO05D000943 1.1e-16 92.0 308 26.9
Lj3g0011959 Lotus japonicus HOM05D001477 ORTHO05D001182 1.1e-16 92.0 335 23.3
CSS0008515 Camellia sinensis var. sinensis HOM05D001477 ORTHO05D001182 1.5e-16 91.7 300 25.0
Manes.13G151200 Manihot esculenta HOM05D001477 ORTHO05D001182 4.3e-16 90.1 317 24.3
CANSAT54G0138 Cannabis sativa HOM05D001477 ORTHO05D001182 5.6e-16 89.7 333 25.5
CAN.G1349.10 Capsicum annuum HOM05D001477 ORTHO05D001182 5.6e-16 89.7 351 24.5
CAN.G1373.24 Capsicum annuum HOM05D001477 ORTHO05D001182 5.6e-16 89.7 269 26.4
CSS0038081 Camellia sinensis var. sinensis HOM05D001477 ORTHO05D001182 9.6e-16 89.0 300 24.7
Peaxi162Scf00202g02030 Petunia axillaris HOM05D001477 ORTHO05D001182 9.6e-16 89.0 269 24.9
Peaxi162Scf00840g00015 Petunia axillaris HOM05D001477 ORTHO05D001182 1.6e-15 88.2 277 24.2
Hund19372 Selenicereus undatus HOM05D001477 ORTHO05D001182 1.6e-15 88.2 398 23.1
Solyc03g121290.4 Solanum lycopersicum HOM05D001477 ORTHO05D001182 2.8e-15 87.4 335 27.5
PGSC0003DMG400009532 Solanum tuberosum HOM05D001477 ORTHO05D001182 2.8e-15 87.4 335 26.3
Sabra19G0137700 Salix brachista HOM05D001477 ORTHO05D001182 3.7e-15 87.0 374 22.5
Peaxi162Scf00038g01239 Petunia axillaris HOM05D001477 ORTHO05D001182 4.8e-15 86.7 330 27.6
vmacro18828 Vaccinium macrocarpon HOM05D001477 ORTHO05D001182 6.2e-15 86.3 288 25.7
Atru.chr6.1369 Acer truncatum HOM05D001477 ORTHO05D001182 8.1e-15 85.9 315 29.2
CAN.G635.11 Capsicum annuum HOM05D001477 ORTHO05D001182 8.1e-15 85.9 309 25.6
Sopen03g040100 Solanum pennellii HOM05D001477 ORTHO05D001182 8.1e-15 85.9 329 26.4
Peaxi162Scf00207g01132 Petunia axillaris HOM05D001477 ORTHO05D001182 1.1e-14 85.5 489 22.1
Haze_00867 Corylus avellana HOM05D001477 ORTHO05D001182 1.4e-14 85.1 271 24.7
AUR62022291 Chenopodium quinoa HOM05D001477 ORTHO05D001182 1.8e-14 84.7 410 22.9
QL04p060686 Quercus lobata HOM05D001477 ORTHO05D001182 1.8e-14 84.7 335 23.6
PGSC0003DMG400002600 Solanum tuberosum HOM05D001477 ORTHO05D001182 2.4e-14 84.3 323 27.6
Hma1.2p1_0388F.1_g142070 Hydrangea macrophylla HOM05D001477 ORTHO05D001182 4.0e-14 83.6 320 26.6
Nitab4.5_0001927g0030 Nicotiana tabacum HOM05D001477 ORTHO05D001182 4.0e-14 83.6 260 28.1
CsaV3_3G044070 Cucumis sativus L. HOM05D001477 ORTHO05D001182 5.3e-14 83.2 332 25.6
QL05p016571 Quercus lobata HOM05D001477 ORTHO05D001182 9.0e-14 82.4 343 26.2
Manes.07G068500 Manihot esculenta HOM05D001477 ORTHO05D001182 1.2e-13 82.0 295 24.1
Nitab4.5_0004848g0100 Nicotiana tabacum HOM05D001477 ORTHO05D001182 1.5e-13 81.6 332 25.6
Nitab4.5_0006071g0070 Nicotiana tabacum HOM05D001477 ORTHO05D001182 1.5e-13 81.6 343 25.9
QL03p032024 Quercus lobata HOM05D001477 ORTHO05D001182 1.5e-13 81.6 241 26.6
EL10Ac2g04568 Beta vulgaris HOM05D001477 ORTHO05D001182 2.0e-13 81.3 302 26.5
QL01p017812 Quercus lobata HOM05D001477 ORTHO05D001182 3.4e-13 80.5 420 22.1
AUR62008987 Chenopodium quinoa HOM05D000145 ORTHO05D001182 4.5e-13 80.1 212 29.7
AUR62023879 Chenopodium quinoa HOM05D001477 ORTHO05D001182 4.5e-13 80.1 317 22.7
CAN.G1668.1 Capsicum annuum HOM05D001477 ORTHO05D001182 5.8e-13 79.7 344 24.7
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 7.6e-13 79.3 309 27.2
Ah.07g200780 Amaranthus hybridus HOM05D001477 ORTHO05D001182 9.9e-13 79.0 236 25.8
QL05p032382 Quercus lobata HOM05D001477 ORTHO05D001182 1.3e-12 78.6 322 26.1
QL05p033764 Quercus lobata HOM05D001477 ORTHO05D001182 2.2e-12 77.8 322 26.1
Haze_19068 Corylus avellana HOM05D001477 ORTHO05D001182 2.9e-12 77.4 275 25.1
Oeu037539.1 Olea europaea HOM05D001477 ORTHO05D001182 2.9e-12 77.4 224 28.1
Potri.001G395000 Populus trichocarpa HOM05D001477 ORTHO05D001182 4.9e-12 76.6 353 24.1
Gohir.A05G133200 Gossypium hirsutum HOM05D001477 ORTHO05D001182 8.4e-12 75.9 322 27.3
Haze_04928 Corylus avellana HOM05D001477 ORTHO05D001182 1.4e-11 75.1 316 25.6
AUR62023317 Chenopodium quinoa HOM05D001477 ORTHO05D001182 1.9e-11 74.7 323 26.3
GSVIVG01016843001 Vitis vinifera HOM05D001477 ORTHO05D001182 1.9e-11 74.7 320 24.7
Sed0016693 Sechium edule HOM05D001477 ORTHO05D001182 2.5e-11 74.3 341 23.8
CAN.G790.34 Capsicum annuum HOM05D001477 ORTHO05D001182 3.2e-11 73.9 279 24.4
Haze_22438 Corylus avellana HOM05D026606 ORTHO05D001182 3.2e-11 73.9 424 23.8
Manes.04G135400 Manihot esculenta HOM05D001477 ORTHO05D001182 4.2e-11 73.6 301 23.9
Ca_01177_v3 Cicer arietinum L. HOM05D001477 ORTHO05D001182 9.3e-11 72.4 343 25.1
Glyma.08G195400 Glycine max HOM05D001477 ORTHO05D001182 9.3e-11 72.4 296 27.0
CSS0028141 Camellia sinensis var. sinensis HOM05D001477 ORTHO05D001182 1.6e-10 71.6 137 34.3
Medtr8g015770 Medicago truncatula HOM05D001477 ORTHO05D001182 1.6e-10 71.6 286 26.6
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 2.1e-10 71.2 242 27.3
QL05p018022 Quercus lobata HOM05D001477 ORTHO05D001182 2.1e-10 71.2 400 21.5
Medtr2g100590 Medicago truncatula HOM05D001477 ORTHO05D001182 4.6e-10 70.1 326 23.6
EL10Ac9g21142 Beta vulgaris HOM05D001477 ORTHO05D001182 6.0e-10 69.7 291 24.4
Ciclev10025281m.g Citrus clementina HOM05D001477 ORTHO05D001182 6.0e-10 69.7 314 23.2
FAN03G1733 Fragaria x ananassa HOM05D001477 ORTHO05D001182 6.0e-10 69.7 164 30.5
CANSAT64G1176 Cannabis sativa HOM05D000051 ORTHO05D010453 7.9e-10 69.3 267 23.6
QL01p017794 Quercus lobata HOM05D001477 ORTHO05D001182 1.0e-09 68.9 427 23.7
Peaxi162Scf00421g00336 Petunia axillaris HOM05D001374 ORTHO05D001182 1.3e-09 68.6 186 26.3
Haze_18899 Corylus avellana HOM05D001477 ORTHO05D001182 2.3e-09 67.8 229 25.8
Medtr2g100570 Medicago truncatula HOM05D001477 ORTHO05D001182 2.3e-09 67.8 350 22.0
PGSC0003DMG401026447 Solanum tuberosum HOM05D012574 ORTHO05D001182 3.9e-09 67.0 171 31.0
AUR62041874 Chenopodium quinoa HOM05D001477 ORTHO05D001182 5.1e-09 66.6 250 29.2
TPR.G24246 Trifolium pratense HOM05D001477 ORTHO05D001182 5.1e-09 66.6 312 23.7
Ah.01g017020 Amaranthus hybridus HOM05D001477 ORTHO05D001182 8.7e-09 65.9 328 23.5
AUR62022295 Chenopodium quinoa HOM05D001477 ORTHO05D001182 8.7e-09 65.9 296 24.3
Medtr5g039970 Medicago truncatula HOM05D000051 ORTHO05D000015 8.7e-09 65.9 318 25.8
QL04p079456 Quercus lobata HOM05D001477 ORTHO05D001182 8.7e-09 65.9 283 23.3
Solyc03g119890.4 Solanum lycopersicum HOM05D009966 ORTHO05D012083 8.7e-09 65.9 350 24.3
Sopen03g038770 Solanum pennellii HOM05D009966 ORTHO05D012083 1.1e-08 65.5 350 24.3
Cfa014269 Carpinus fangiana HOM05D001477 ORTHO05D001182 1.5e-08 65.1 239 25.1
Ciclev10025241m.g Citrus clementina HOM05D001477 ORTHO05D001182 1.5e-08 65.1 331 26.0
TPR.G6557 Trifolium pratense HOM05D001477 ORTHO05D001182 1.5e-08 65.1 345 23.8
Cpa.g.sc34.96 Carica papaya HOM05D011500 ORTHO05D013831 1.9e-08 64.7 220 29.1
CiPaw.15G162600 Carya illinoinensis HOM05D001477 ORTHO05D001182 2.5e-08 64.3 346 22.3
PGSC0003DMG402005699 Solanum tuberosum HOM05D009966 ORTHO05D012083 2.5e-08 64.3 374 24.1
CAN.G438.102 Capsicum annuum HOM05D009966 ORTHO05D012083 3.3e-08 63.9 391 24.8
Nitab4.5_0003218g0100 Nicotiana tabacum HOM05D012574 ORTHO05D001182 4.3e-08 63.5 251 26.7
TAR627G0813 Trochodendron aralioides HOM05D000421 ORTHO05D001182 4.3e-08 63.5 251 24.3
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 5.6e-08 63.2 351 22.5
Medtr6g006730 Medicago truncatula HOM05D001477 ORTHO05D001182 5.6e-08 63.2 343 25.4
Actinidia12455 Actinidia chinensis HOM05D001477 ORTHO05D001182 7.4e-08 62.8 154 26.6
ECA238G4135 Erigeron canadensis HOM05D001477 ORTHO05D001182 9.6e-08 62.4 341 24.9
PGSC0003DMG401005699 Solanum tuberosum HOM05D009966 ORTHO05D012083 9.6e-08 62.4 347 23.9
arahy.Tifrunner.gnm1.ann1.U2Q3GN Arachis hypogaea HOM05D001477 ORTHO05D001182 1.3e-07 62.0 151 29.1
CANSAT01G2812 Cannabis sativa HOM05D001477 ORTHO05D001182 1.3e-07 62.0 208 28.4
Psat5g295000 Pisum sativum HOM05D001477 ORTHO05D001182 1.6e-07 61.6 327 22.6
COL.COLO4_12879 Corchorus olitorius HOM05D001477 ORTHO05D001182 2.1e-07 61.2 244 27.0
CSS0018246 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 2.8e-07 60.8 303 25.4
CAN.G438.101 Capsicum annuum HOM05D009966 ORTHO05D012083 2.8e-07 60.8 341 24.9
Glyma.15G022500 Glycine max HOM05D000862 ORTHO05D000943 2.8e-07 60.8 342 22.8
Ciclev10027156m.g Citrus clementina HOM05D001477 ORTHO05D001182 3.7e-07 60.5 277 25.6
Medtr8g015680 Medicago truncatula HOM05D001477 ORTHO05D001182 3.7e-07 60.5 284 25.0
Lsat_1_v5_gn_4_96261 Lactuca sativa HOM05D000862 ORTHO05D000943 4.8e-07 60.1 165 29.1
Oeu036484.2 Olea europaea HOM05D000051 ORTHO05D000015 4.8e-07 60.1 379 21.4
Medtr7g016460 Medicago truncatula HOM05D001477 ORTHO05D001182 6.2e-07 59.7 296 24.7
vmacro09739 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 6.2e-07 59.7 301 24.3
Actinidia29669 Actinidia chinensis HOM05D001477 ORTHO05D001182 1.1e-06 58.9 186 32.8
CAN.G635.4 Capsicum annuum HOM05D001477 ORTHO05D001182 1.1e-06 58.9 164 25.0
Haze_19062 Corylus avellana HOM05D001477 ORTHO05D001182 1.1e-06 58.9 166 27.7
HanXRQChr17g0544741 Helianthus annuus HOM05D001477 ORTHO05D001182 1.1e-06 58.9 271 23.2
QL01p041755 Quercus lobata HOM05D000051 ORTHO05D000015 1.1e-06 58.9 332 24.4
Ah.16g101830 Amaranthus hybridus HOM05D000001 ORTHO05D001705 1.4e-06 58.5 194 24.7
TPR.G25974 Trifolium pratense HOM05D000051 ORTHO05D000015 1.4e-06 58.5 316 24.4
arahy.Tifrunner.gnm1.ann1.JN7S8K Arachis hypogaea HOM05D001477 ORTHO05D001182 1.8e-06 58.2 279 22.6
QL05p015815 Quercus lobata HOM05D001477 ORTHO05D001182 1.8e-06 58.2 249 25.7
Cpa.g.c29990 Carica papaya HOM05D011500 ORTHO05D013831 2.4e-06 57.8 249 25.7
Nn3g18635 Nelumbo nucifera HOM05D000051 ORTHO05D000015 2.4e-06 57.8 269 27.5
Nn3g18638 Nelumbo nucifera HOM05D000051 ORTHO05D000015 2.4e-06 57.8 269 27.5
GSVIVG01016827001 Vitis vinifera HOM05D001477 ORTHO05D001182 2.4e-06 57.8 156 28.2
Haze_18985 Corylus avellana HOM05D001477 ORTHO05D001182 5.3e-06 56.6 151 26.5
Dinv40730 Davidia involucrata HOM05D000051 ORTHO05D000015 5.3e-06 56.6 302 25.8
Migut.E00605 Erythranthe guttata HOM05D005930 ORTHO05D003423 6.9e-06 56.2 211 24.2
Medtr3g048290 Medicago truncatula HOM05D000051 ORTHO05D000015 6.9e-06 56.2 404 23.5
EL10Ac3g05730 Beta vulgaris HOM05D001477 ORTHO05D001182 9.0e-06 55.8 323 22.9
Haze_19075 Corylus avellana HOM05D001477 ORTHO05D001182 9.0e-06 55.8 457 19.3
Lsat_1_v5_gn_7_108840 Lactuca sativa HOM05D000051 ORTHO05D000015 9.0e-06 55.8 297 26.3
Rhsim04G0225400 Rhododendron simsii HOM05D001477 ORTHO05D001182 9.0e-06 55.8 129 26.4
Solyc04g051885.1 Solanum lycopersicum HOM05D008903 ORTHO05D011660 9.0e-06 55.8 233 23.6
PGSC0003DMG400005634 Solanum tuberosum HOM05D009966 ORTHO05D012083 9.0e-06 55.8 362 23.2
Thecc.07G045800 Theobroma cacao HOM05D000051 ORTHO05D000015 9.0e-06 55.8 295 25.8


User provided reference genes

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