Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1089 Erigeron canadensis HOM05D004222 ORTHO05D004982 1.4e-93 346.3 179 100.0
ECA232G2519 Erigeron canadensis HOM05D004222 ORTHO05D004982 6.0e-84 314.3 179 90.5
Lsat_1_v5_gn_4_74980 Lactuca sativa HOM05D004222 ORTHO05D004982 5.6e-82 307.8 179 88.8
Cc02_g29210 Coffea canephora HOM05D004222 ORTHO05D004982 9.6e-74 280.4 176 80.7
Lj9A532G68 Lonicera japonica HOM05D004222 ORTHO05D004982 9.6e-74 280.4 179 81.0
Lj9C524T6 Lonicera japonica HOM05D004222 ORTHO05D004982 9.6e-74 280.4 179 81.0
Rhsim08G0239600 Rhododendron simsii HOM05D004222 ORTHO05D004982 9.6e-74 280.4 178 79.2
Dinv15742 Davidia involucrata HOM05D004222 ORTHO05D004982 1.6e-73 279.6 180 80.6
vmacro15039 Vaccinium macrocarpon HOM05D004222 ORTHO05D004982 4.8e-73 278.1 178 79.2
Rhsim01G0228800 Rhododendron simsii HOM05D004222 ORTHO05D004982 1.4e-72 276.6 178 79.2
vmacro16353 Vaccinium macrocarpon HOM05D004222 ORTHO05D004982 1.4e-72 276.6 178 78.7
Dinv37865 Davidia involucrata HOM05D004222 ORTHO05D004982 4.0e-72 275.0 179 80.4
GSVIVG01016750001 Vitis vinifera HOM05D004222 ORTHO05D004982 4.0e-72 275.0 179 81.0
CSS0031925 Camellia sinensis var. sinensis HOM05D004222 ORTHO05D004982 6.9e-72 274.2 181 80.1
Cc04_g01280 Coffea canephora HOM05D004222 ORTHO05D004982 5.8e-71 271.2 174 78.2
Manes.11G019600 Manihot esculenta HOM05D004222 ORTHO05D004982 7.6e-71 270.8 180 81.1
CiPaw.01G218100 Carya illinoinensis HOM05D004222 ORTHO05D004982 1.3e-70 270.0 179 79.3
Haze_16054 Corylus avellana HOM05D004222 ORTHO05D004982 2.2e-70 269.2 179 78.8
Potri.001G168300 Populus trichocarpa HOM05D004222 ORTHO05D004982 2.2e-70 269.2 179 79.9
TAR383G0284 Trochodendron aralioides HOM05D004222 ORTHO05D004982 2.9e-70 268.9 177 78.0
Actinidia32191 Actinidia chinensis HOM05D004222 ORTHO05D004982 1.1e-69 266.9 180 77.8
Actinidia21792 Actinidia chinensis HOM05D004222 ORTHO05D004982 1.4e-69 266.5 180 78.9
DCAR_002631 Daucus carota HOM05D004222 ORTHO05D004982 1.4e-69 266.5 178 78.1
Sabra01G0142300 Salix brachista HOM05D004222 ORTHO05D004982 1.4e-69 266.5 175 79.4
Duzib235G1272 Durio zibethinus HOM05D004222 ORTHO05D004982 1.9e-69 266.2 179 78.8
Thecc.06G121100 Theobroma cacao HOM05D004222 ORTHO05D004982 5.4e-69 264.6 179 78.8
Manes.04G145400 Manihot esculenta HOM05D004222 ORTHO05D004982 7.1e-69 264.2 176 77.8
DCAR_023344 Daucus carota HOM05D004222 ORTHO05D004982 9.3e-69 263.8 178 76.4
Gorai.011G059100 Gossypium raimondii HOM05D004222 ORTHO05D004982 2.7e-68 262.3 179 78.2
FAN09G4904 Fragaria x ananassa HOM05D004222 ORTHO05D004982 4.6e-68 261.5 173 80.3
RcHm_v2.0_Chr2g0145741 Rosa chinensis HOM05D004222 ORTHO05D004982 4.6e-68 261.5 180 77.8
Nitab4.5_0003780g0070 Nicotiana tabacum HOM05D004222 ORTHO05D004982 6.0e-68 261.2 181 75.7
Hma1.2p1_0074F.1_g038830 Hydrangea macrophylla HOM05D004222 ORTHO05D004982 1.0e-67 260.4 179 76.0
Hma1.2p1_3000F.1_g331525 Hydrangea macrophylla HOM05D004222 ORTHO05D004982 1.0e-67 260.4 179 76.0
Nitab4.5_0006737g0050 Nicotiana tabacum HOM05D004222 ORTHO05D004982 1.0e-67 260.4 181 75.7
Oeu026248.1 Olea europaea HOM05D004222 ORTHO05D004982 1.0e-67 260.4 177 75.7
CiPaw.02G135300 Carya illinoinensis HOM05D004222 ORTHO05D004982 1.3e-67 260.0 172 80.2
Gohir.A10G053600 Gossypium hirsutum HOM05D004222 ORTHO05D004982 1.3e-67 260.0 179 77.7
Atru.chr1.3997 Acer truncatum HOM05D004222 ORTHO05D004982 1.8e-67 259.6 176 76.7
Cfa003517 Carpinus fangiana HOM05D004222 ORTHO05D004982 1.8e-67 259.6 167 80.2
FvH4_6g34870 Fragaria vesca HOM05D004222 ORTHO05D004982 1.8e-67 259.6 173 79.8
FAN14G1002 Fragaria x ananassa HOM05D004222 ORTHO05D004982 1.8e-67 259.6 173 79.8
Gohir.D10G055400 Gossypium hirsutum HOM05D004222 ORTHO05D004982 2.3e-67 259.2 179 77.7
Solyc04g010090.3 Solanum lycopersicum HOM05D004222 ORTHO05D004982 5.1e-67 258.1 181 75.7
Sopen04g005230 Solanum pennellii HOM05D004222 ORTHO05D004982 5.1e-67 258.1 181 75.7
EL10Ac4g09456 Beta vulgaris HOM05D004222 ORTHO05D004982 1.1e-66 256.9 179 74.3
FAN02G1508 Fragaria x ananassa HOM05D004222 ORTHO05D004982 1.1e-66 256.9 173 79.2
AUR62006751 Chenopodium quinoa HOM05D004222 ORTHO05D004982 1.5e-66 256.5 179 74.3
Ciclev10032895m.g Citrus clementina HOM05D004222 ORTHO05D004982 1.5e-66 256.5 175 76.0
CsaV3_7G034430 Cucumis sativus L. HOM05D004222 ORTHO05D004982 1.5e-66 256.5 180 76.1
QL05p004213 Quercus lobata HOM05D004222 ORTHO05D004982 1.5e-66 256.5 175 76.6
MELO3C024352.2 Cucumis melo HOM05D004222 ORTHO05D004982 1.9e-66 256.1 177 76.3
CAN.G786.39 Capsicum annuum HOM05D004222 ORTHO05D004982 2.5e-66 255.8 181 74.6
PGR031G1684 Punica granatum HOM05D004222 ORTHO05D004982 2.5e-66 255.8 174 79.3
Oeu043649.1 Olea europaea HOM05D004222 ORTHO05D004982 4.3e-66 255.0 189 72.5
PGSC0003DMG400011493 Solanum tuberosum HOM05D004222 ORTHO05D004982 4.3e-66 255.0 181 75.1
AUR62000395 Chenopodium quinoa HOM05D004222 ORTHO05D004982 5.6e-66 254.6 179 73.7
Ciclev10026608m.g Citrus clementina HOM05D004222 ORTHO05D004982 5.6e-66 254.6 179 74.3
COL.COLO4_30749 Corchorus olitorius HOM05D004222 ORTHO05D004982 2.8e-65 252.3 173 75.7
Eucgr.G03389 Eucalyptus grandis HOM05D004222 ORTHO05D004982 2.8e-65 252.3 172 73.8
PSO135G0791 Papaver somniferum HOM05D004222 ORTHO05D004982 4.8e-65 251.5 178 73.6
A08p01190 Brassica napus HOM05D004222 ORTHO05D004982 1.8e-64 249.6 174 75.3
BraA08t32170Z Brassica rapa HOM05D004222 ORTHO05D004982 1.8e-64 249.6 174 75.3
TAR626G0656 Trochodendron aralioides HOM05D004222 ORTHO05D004982 1.8e-64 249.6 174 75.9
BolC3t21520H Brassica oleracea HOM05D004222 ORTHO05D004982 3.1e-64 248.8 174 74.7
ClCG09G000990 Citrullus lanatus HOM05D004222 ORTHO05D004982 3.1e-64 248.8 169 78.7
Lalb_Chr13g0298711 Lupinus albus HOM05D004222 ORTHO05D004982 3.1e-64 248.8 180 73.9
MD09G1181700 Malus domestica HOM05D004222 ORTHO05D004982 3.1e-64 248.8 179 76.0
BcaC01g01437 Brassica carinata HOM05D004222 ORTHO05D004982 4.0e-64 248.4 174 74.7
C03p92020 Brassica napus HOM05D004222 ORTHO05D004982 4.0e-64 248.4 174 74.7
ATR0598G103 Amborella trichopoda HOM05D004222 ORTHO05D004982 5.3e-64 248.1 172 72.7
Sc16g0009040 Simmondsia chinensis HOM05D004222 ORTHO05D004982 5.3e-64 248.1 180 72.8
BcaB04g17022 Brassica carinata HOM05D004222 ORTHO05D004982 6.9e-64 247.7 178 74.7
Sp1g40590 Schrenkiella parvula HOM05D004222 ORTHO05D004982 6.9e-64 247.7 177 74.0
Sed0002362 Sechium edule HOM05D004222 ORTHO05D004982 6.9e-64 247.7 175 75.4
Phvul.003G118200 Phaseolus vulgaris HOM05D004222 ORTHO05D004982 9.0e-64 247.3 174 73.6
Migut.I01080 Erythranthe guttata HOM05D004222 ORTHO05D004982 1.2e-63 246.9 179 72.1
Eucgr.H02488 Eucalyptus grandis HOM05D004222 ORTHO05D004982 1.2e-63 246.9 172 73.3
Lj4g0027352 Lotus japonicus HOM05D004222 ORTHO05D004982 1.2e-63 246.9 178 72.5
Medtr4g123000 Medicago truncatula HOM05D004222 ORTHO05D004982 1.2e-63 246.9 178 73.6
PSO724G0032 Papaver somniferum HOM05D004222 ORTHO05D004982 1.2e-63 246.9 179 71.5
SGA_v2.0_scaffold4G02066 Striga asiatica HOM05D004222 ORTHO05D004982 1.2e-63 246.9 181 73.5
Medtr3g015130 Medicago truncatula HOM05D004222 ORTHO05D004982 1.5e-63 246.5 178 73.6
Glyma.17G037200 Glycine max HOM05D004222 ORTHO05D004982 2.0e-63 246.1 178 73.0
Prupe.3G039800 Prunus persica HOM05D004222 ORTHO05D004982 2.6e-63 245.7 180 76.1
unitig_699.g19654 Utricularia gibba HOM05D004222 ORTHO05D004982 2.6e-63 245.7 176 71.6
Glyma.07G236200 Glycine max HOM05D004222 ORTHO05D004982 3.4e-63 245.4 178 74.2
MSTRG.9521 Avicennia marina HOM05D004222 ORTHO05D004982 5.8e-63 244.6 188 71.8
arahy.Tifrunner.gnm1.ann1.J7IGQN Arachis hypogaea HOM05D004222 ORTHO05D004982 1.3e-62 243.4 183 72.7
arahy.Tifrunner.gnm1.ann1.M5IJ04 Arachis hypogaea HOM05D004222 ORTHO05D004982 1.3e-62 243.4 183 72.7
Nn2g10347 Nelumbo nucifera HOM05D004222 ORTHO05D004982 1.3e-62 243.4 166 75.9
TWI31G0208 Tripterygium wilfordii HOM05D004222 ORTHO05D004982 1.3e-62 243.4 172 77.3
HanXRQChr09g0262591 Helianthus annuus HOM05D004222 ORTHO05D004982 1.7e-62 243.0 158 80.4
Thhalv10012402m.g Eutrema salsugineum HOM05D004222 ORTHO05D004982 2.2e-62 242.7 177 73.4
TWI75G1350 Tripterygium wilfordii HOM05D004222 ORTHO05D004982 6.5e-62 241.1 172 74.4
Psat0s1953g0320 Pisum sativum HOM05D004222 ORTHO05D004982 8.4e-62 240.7 181 70.2
Ah.04g158670 Amaranthus hybridus HOM05D004222 ORTHO05D004982 1.4e-61 240.0 172 72.1
Ca_21404_v3 Cicer arietinum L. HOM05D004222 ORTHO05D004982 1.9e-61 239.6 178 71.3
Ca_21419_v3 Cicer arietinum L. HOM05D004222 ORTHO05D004982 1.9e-61 239.6 178 71.3
SalBow6G6030 Salvia bowleyana HOM05D004222 ORTHO05D004982 2.5e-61 239.2 172 72.1
SGA_v2.0_scaffold68G22854 Striga asiatica HOM05D004222 ORTHO05D004982 3.5e-60 235.3 181 71.3
THA.LOC104810368 Tarenaya hassleriana HOM05D004222 ORTHO05D004982 1.3e-59 233.4 180 71.7
Glyma.02G277500 Glycine max HOM05D004222 ORTHO05D004982 2.3e-59 232.6 179 67.6
SEGI_03819 Sequoiadendron giganteum HOM05D004222 ORTHO05D004982 3.9e-59 231.9 178 69.7
Peaxi162Scf00528g00226 Petunia axillaris HOM05D004222 ORTHO05D004982 6.7e-59 231.1 131 85.5
CANSAT64G2454 Cannabis sativa HOM05D004222 ORTHO05D004982 1.5e-58 229.9 139 82.0
Ah.06g195960 Amaranthus hybridus HOM05D004222 ORTHO05D004982 3.3e-58 228.8 179 66.5
AL1G62860 Arabidopsis lyrata HOM05D004222 ORTHO05D004982 7.4e-58 227.6 177 70.1
TPR.G18581 Trifolium pratense HOM05D004222 ORTHO05D004982 7.4e-58 227.6 179 67.6
AT1G54140 Arabidopsis thaliana HOM05D004222 ORTHO05D004982 9.6e-58 227.3 178 69.7
BcaB02g10859 Brassica carinata HOM05D004222 ORTHO05D004982 9.6e-58 227.3 171 70.2
CDE08G1040 Ceratophyllum demersum HOM05D004222 ORTHO05D004982 1.6e-57 226.5 175 68.6
CARHR044490 Cardamine hirsuta HOM05D004222 ORTHO05D004982 3.7e-57 225.3 175 70.9
VMungo0647G2371 Vigna mungo HOM05D004222 ORTHO05D004982 4.8e-57 224.9 175 70.9
SalBow6G3336 Salvia bowleyana HOM05D004222 ORTHO05D004982 2.4e-56 222.6 172 68.0
BcaC08g44165 Brassica carinata HOM05D004222 ORTHO05D004982 3.1e-56 222.2 174 69.0
Carub.0001s4338 Capsella rubella HOM05D004222 ORTHO05D004982 4.0e-56 221.9 179 68.7
AL1G63010 Arabidopsis lyrata HOM05D004222 ORTHO05D004982 5.3e-56 221.5 178 68.5
SalBow6G2027 Salvia bowleyana HOM05D004222 ORTHO05D004982 6.9e-56 221.1 172 67.4
BolC6t36754H Brassica oleracea HOM05D004222 ORTHO05D004982 1.2e-55 220.3 174 68.4
C06p15670 Brassica napus HOM05D004222 ORTHO05D004982 2.0e-55 219.5 141 80.1
PGR042G1688 Punica granatum HOM05D004222 ORTHO05D004982 5.8e-55 218.0 144 75.0
Phvul.008G203400 Phaseolus vulgaris HOM05D004222 ORTHO05D004982 1.0e-54 217.2 175 68.0
Aqoxy5G01362 Aquilegia oxysepala HOM05D004222 ORTHO05D004982 1.3e-54 216.9 172 68.6
VMungo1215G2100 Vigna mungo HOM05D004222 ORTHO05D004982 1.1e-53 213.8 249 51.4
Dinv10670 Davidia involucrata HOM05D004222 ORTHO05D004982 1.6e-52 209.9 157 72.0
MBI05_g15473_MAGBIO Magnolia biondii HOM05D004222 ORTHO05D004982 1.3e-51 206.8 180 62.8
Aa31LG10G1270 Aethionema arabicum HOM05D004222 ORTHO05D004982 6.7e-51 204.5 174 65.5
HPP92_016607 Vanilla planifolia HOM05D004222 ORTHO05D004982 1.1e-50 203.8 183 66.1
Atru.chr1.2991 Acer truncatum HOM05D004222 ORTHO05D004982 9.7e-50 200.7 121 80.2
SHI11210 Sapria himalayana HOM05D004222 ORTHO05D004982 3.1e-48 195.7 166 63.3
Pp3c19_19770 Physcomitrium patens HOM05D004222 ORTHO05D004982 1.5e-47 193.4 174 57.5
Mapoly0152s0015 Marchantia polymorpha HOM05D004222 ORTHO05D004982 2.2e-46 189.5 179 57.5
Os03g0408500 Oryza sativa ssp. japonica HOM05D004222 ORTHO05D004982 2.2e-46 189.5 178 61.2
AagrBONN_evm.TU.Sc2ySwM_117.372 Anthoceros agrestis HOM05D004222 ORTHO05D004982 7.9e-44 181.0 180 53.9
SMO340G0157 Selaginella moellendorffii HOM05D004222 ORTHO05D004982 1.8e-43 179.9 143 60.1
CBR_g52315 Chara braunii HOM05D004222 ORTHO05D004982 6.7e-43 177.9 164 56.1
Zm00001eb019630 Zea mays HOM05D004222 ORTHO05D004982 2.0e-42 176.4 183 56.8
Zm00001eb392970 Zea mays HOM05D004222 ORTHO05D004982 9.7e-42 174.1 181 55.8
HanXRQChr14g0440851 Helianthus annuus HOM05D004222 ORTHO05D004982 1.8e-40 169.9 182 53.8
AUR62029931 Chenopodium quinoa HOM05D004222 ORTHO05D004982 1.1e-37 160.6 89 85.4
Cc02_g29240 Coffea canephora HOM05D004222 ORTHO05D004982 4.2e-37 158.7 117 70.9
AUR62033567 Chenopodium quinoa HOM05D004222 ORTHO05D004982 2.3e-35 152.9 141 60.3
AUR62043147 Chenopodium quinoa HOM05D004222 ORTHO05D004982 1.5e-34 150.2 86 82.6
TPR.G12685 Trifolium pratense HOM05D004222 ORTHO05D004982 2.6e-34 149.4 89 85.4
Eucgr.J01267 Eucalyptus grandis HOM05D004222 ORTHO05D004982 1.7e-33 146.7 177 48.6
Ah.06g188160 Amaranthus hybridus HOM05D000059 ORTHO05D004982 7.0e-32 141.4 131 59.5
Duzib160G0511 Durio zibethinus HOM05D004222 ORTHO05D004982 1.3e-30 137.1 112 66.1
C06p09920 Brassica napus HOM05D004222 ORTHO05D004982 4.7e-28 128.6 147 56.5
Thhalv10029376m.g Eutrema salsugineum HOM05D004222 ORTHO05D004982 1.4e-27 127.1 118 63.6
PRCOL_00004328 Prasinoderma coloniale HOM05D004222 ORTHO05D004982 7.0e-24 114.8 128 48.4
Cre07.g353350 Chlamydomonas reinhardtii HOM05D004222 ORTHO05D004982 7.7e-23 111.3 126 44.4
TPR.G10895 Trifolium pratense HOM05D004222 ORTHO05D004982 2.5e-21 106.3 90 62.2
BcaC08g43594 Brassica carinata HOM05D004222 ORTHO05D004982 1.6e-20 103.6 109 59.6
BolC6t36064H Brassica oleracea HOM05D004222 ORTHO05D004982 1.6e-20 103.6 109 59.6
Haze_26828 Corylus avellana HOM05D000371 ORTHO05D004982 1.6e-20 103.6 105 44.8
Os07g0612500 Oryza sativa ssp. japonica HOM05D004222 ORTHO05D004982 1.7e-17 93.6 155 35.5
FAN05G5041 Fragaria x ananassa HOM05D004222 ORTHO05D004982 6.3e-17 91.7 86 61.6
AUR62034601 Chenopodium quinoa HOM05D004222 ORTHO05D004982 7.0e-16 88.2 46 87.0
unitig_52.g17107 Utricularia gibba HOM05D004222 ORTHO05D004982 6.5e-14 81.6 80 56.2
MCO04G196 Micromonas commoda HOM05D004222 ORTHO05D004982 8.0e-12 74.7 89 40.4
Nitab4.5_0018373g0020 Nicotiana tabacum HOM05D000428 ORTHO05D000582 6.8e-11 71.6 85 49.4
ECA238G1237 Erigeron canadensis HOM05D004222 ORTHO05D004982 1.5e-10 70.5 193 34.2
Medtr6g027990 Medicago truncatula HOM05D004222 ORTHO05D004982 3.4e-10 69.3 68 57.4
CARHR038570 Cardamine hirsuta HOM05D004222 ORTHO05D004982 2.0e-07 60.1 79 49.4
Cc01_g11080 Coffea canephora HOM05D004222 ORTHO05D154025 5.0e-06 55.5 109 38.5


User provided reference genes

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