Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA149G0002 Erigeron canadensis HOM05D002336 ORTHO05D002526 2.4e-84 315.5 161 100.0
ECA248G0907 Erigeron canadensis HOM05D002336 ORTHO05D002526 7.8e-75 283.9 162 92.0
ECA220G0003 Erigeron canadensis HOM05D002336 ORTHO05D002526 7.8e-59 230.7 134 90.3
Lsat_1_v5_gn_1_130320 Lactuca sativa HOM05D002176 ORTHO05D002598 1.9e-44 183.0 154 69.5
Hma1.2p1_0394F.1_g143540 Hydrangea macrophylla HOM05D002336 ORTHO05D002526 1.5e-33 146.7 175 54.3
Dinv07137 Davidia involucrata HOM05D002336 ORTHO05D002526 4.3e-33 145.2 175 54.3
Peaxi162Scf00811g00442 Petunia axillaris HOM05D002336 ORTHO05D002526 2.0e-30 136.3 170 51.2
Prupe.4G002300 Prunus persica HOM05D002336 ORTHO05D002526 1.7e-29 133.3 151 51.0
PGR004G0111 Punica granatum HOM05D002336 ORTHO05D002526 4.2e-28 128.6 181 48.6
Manes.09G085000 Manihot esculenta HOM05D002336 ORTHO05D002526 5.5e-28 128.3 177 50.3
CiPaw.10G083700 Carya illinoinensis HOM05D002336 ORTHO05D002526 1.6e-27 126.7 154 51.9
MD10G1340900 Malus domestica HOM05D002336 ORTHO05D002526 2.1e-27 126.3 181 47.5
Eucgr.D00945 Eucalyptus grandis HOM05D002336 ORTHO05D002526 1.3e-26 123.6 180 46.7
Nitab4.5_0010199g0060 Nicotiana tabacum HOM05D002336 ORTHO05D002526 1.8e-26 123.2 191 46.1
FvH4_3g00201 Fragaria vesca HOM05D002336 ORTHO05D002526 3.0e-26 122.5 164 47.0
Solyc04g015180.3 Solanum lycopersicum HOM05D002336 ORTHO05D002526 3.9e-26 122.1 172 48.3
Rhsim13G0138400 Rhododendron simsii HOM05D002336 ORTHO05D002526 6.7e-26 121.3 189 46.6
Cc09_g00160 Coffea canephora HOM05D002336 ORTHO05D002526 1.5e-25 120.2 177 44.6
FAN21G1357 Fragaria x ananassa HOM05D002336 ORTHO05D002526 1.5e-25 120.2 164 48.8
MD05G1363300 Malus domestica HOM05D002336 ORTHO05D002526 4.3e-25 118.6 160 47.5
Sopen04g007220 Solanum pennellii HOM05D002336 ORTHO05D002526 4.3e-25 118.6 172 48.3
Cfa000015 Carpinus fangiana HOM05D002336 ORTHO05D002526 1.3e-24 117.1 179 43.6
Sed0019231 Sechium edule HOM05D002336 ORTHO05D002526 1.3e-24 117.1 151 49.7
CSS0011496 Camellia sinensis var. sinensis HOM05D002336 ORTHO05D002526 2.2e-24 116.3 177 45.8
MELO3C007997.2 Cucumis melo HOM05D002336 ORTHO05D002526 2.2e-24 116.3 173 46.2
CsaV3_6G048110 Cucumis sativus L. HOM05D002336 ORTHO05D002526 2.8e-24 115.9 162 47.5
GSVIVG01003467001 Vitis vinifera HOM05D002336 ORTHO05D002526 8.2e-24 114.4 177 44.1
MSTRG.16067 Avicennia marina HOM05D002336 ORTHO05D002526 1.1e-23 114.0 170 45.9
Actinidia02276 Actinidia chinensis HOM05D002336 ORTHO05D002526 1.4e-23 113.6 169 46.2
Potri.016G003200 Populus trichocarpa HOM05D002336 ORTHO05D002526 6.9e-23 111.3 159 48.4
ClCG01G021110 Citrullus lanatus HOM05D002336 ORTHO05D002526 1.5e-22 110.2 160 45.6
THA.LOC104823021 Tarenaya hassleriana HOM05D002336 ORTHO05D002526 1.5e-22 110.2 178 46.1
Gorai.010G190700 Gossypium raimondii HOM05D002336 ORTHO05D002526 3.4e-22 109.0 184 45.1
HanXRQChr01g0005731 Helianthus annuus HOM05D002336 ORTHO05D002526 4.5e-22 108.6 90 63.3
Sp2g12487 Schrenkiella parvula HOM05D002336 ORTHO05D002526 4.5e-22 108.6 161 44.7
Gohir.D06G163600 Gossypium hirsutum HOM05D002336 ORTHO05D002526 5.9e-22 108.2 184 45.1
Prupe.4G017900 Prunus persica HOM05D002336 ORTHO05D002526 7.7e-22 107.8 109 54.1
Thhalv10001026m.g Eutrema salsugineum HOM05D002336 ORTHO05D002526 1.3e-21 107.1 177 44.1
vmacro03592 Vaccinium macrocarpon HOM05D002336 ORTHO05D002526 1.3e-21 107.1 159 47.2
Gohir.A06G157300 Gossypium hirsutum HOM05D002336 ORTHO05D002526 1.7e-21 106.7 184 44.6
Thecc.06G242900 Theobroma cacao HOM05D002336 ORTHO05D002526 5.0e-21 105.1 195 43.1
SGA_v2.0_scaffold7G03662 Striga asiatica HOM05D002336 ORTHO05D002526 6.5e-21 104.8 171 42.7
Rhsim08G0216900 Rhododendron simsii HOM05D002659 ORTHO05D002526 8.5e-21 104.4 166 45.8
Sabra16G0008400 Salix brachista HOM05D000456 ORTHO05D000887 8.5e-21 104.4 164 47.0
Ciclev10016499m.g Citrus clementina HOM05D002336 ORTHO05D002526 1.1e-20 104.0 164 42.1
A02p31610 Brassica napus HOM05D002336 ORTHO05D002526 1.4e-20 103.6 159 44.0
Atru.chr1.2178 Acer truncatum HOM05D002336 ORTHO05D002526 1.9e-20 103.2 173 41.6
Lalb_Chr20g0119621 Lupinus albus HOM05D002336 ORTHO05D002526 2.5e-20 102.8 167 43.7
QL03p035757 Quercus lobata HOM05D002336 ORTHO05D002526 3.2e-20 102.4 173 42.2
AUR62015177 Chenopodium quinoa HOM05D002336 ORTHO05D002526 4.2e-20 102.1 157 42.7
COL.COLO4_31953 Corchorus olitorius HOM05D002336 ORTHO05D002526 5.5e-20 101.7 188 43.1
QL05p066607 Quercus lobata HOM05D002336 ORTHO05D002526 5.5e-20 101.7 172 44.2
Sc17g0008060 Simmondsia chinensis HOM05D002336 ORTHO05D002526 7.2e-20 101.3 161 43.5
TWI38G0736 Tripterygium wilfordii HOM05D002336 ORTHO05D002526 7.2e-20 101.3 184 44.0
CANSAT56G2025 Cannabis sativa HOM05D002336 ORTHO05D002526 9.4e-20 100.9 160 42.5
Nn1g07725 Nelumbo nucifera HOM05D002336 ORTHO05D002526 1.2e-19 100.5 196 37.2
CAN.G1456.5 Capsicum annuum HOM05D002336 ORTHO05D002526 3.6e-19 99.0 169 43.8
FAN19G0993 Fragaria x ananassa HOM05D002336 ORTHO05D002526 3.6e-19 99.0 147 47.6
arahy.Tifrunner.gnm1.ann1.WK75UE Arachis hypogaea HOM05D002336 ORTHO05D002526 4.7e-19 98.6 176 39.8
Carub.0007s2571 Capsella rubella HOM05D002336 ORTHO05D002526 4.7e-19 98.6 179 42.5
RcHm_v2.0_Chr5g0000271 Rosa chinensis HOM05D002336 ORTHO05D002526 4.7e-19 98.6 167 40.7
AL7G39320 Arabidopsis lyrata HOM05D002336 ORTHO05D002526 7.9e-19 97.8 177 41.2
arahy.Tifrunner.gnm1.ann1.7YIN9J Arachis hypogaea HOM05D002336 ORTHO05D002526 7.9e-19 97.8 176 39.2
EL10Ac9g22885 Beta vulgaris HOM05D002336 ORTHO05D002526 1.0e-18 97.4 148 44.6
C02p48950 Brassica napus HOM05D002336 ORTHO05D002526 1.0e-18 97.4 196 40.3
Cpa.g.sc27.205 Carica papaya HOM05D002336 ORTHO05D002526 1.4e-18 97.1 151 43.0
Nitab4.5_0000147g0240 Nicotiana tabacum HOM05D002336 ORTHO05D002526 2.3e-18 96.3 160 41.9
VMungo0540G1254 Vigna mungo HOM05D002336 ORTHO05D002526 5.1e-18 95.1 167 41.9
Migut.M01463 Erythranthe guttata HOM05D002336 ORTHO05D002526 6.7e-18 94.7 168 38.7
MBI19_g01939_MAGBIO Magnolia biondii HOM05D002336 ORTHO05D002526 6.7e-18 94.7 140 42.9
Psat1g171880 Pisum sativum HOM05D002336 ORTHO05D002526 8.8e-18 94.4 170 41.2
MBI17_g08176_MAGBIO Magnolia biondii HOM05D002336 ORTHO05D002526 3.3e-17 92.4 176 40.3
unitig_32.g11410 Utricularia gibba HOM05D002336 ORTHO05D002526 3.3e-17 92.4 180 41.7
FAN19G0974 Fragaria x ananassa HOM05D002336 ORTHO05D002526 4.4e-17 92.0 142 46.5
Glyma.09G016100 Glycine max HOM05D002336 ORTHO05D002526 5.7e-17 91.7 169 39.1
Duzib235G1184 Durio zibethinus HOM05D002336 ORTHO05D002526 7.4e-17 91.3 155 41.9
PSO210G5018 Papaver somniferum HOM05D002336 ORTHO05D002526 9.7e-17 90.9 178 35.4
Medtr2g027530 Medicago truncatula HOM05D002336 ORTHO05D002526 1.3e-16 90.5 175 40.0
BraA02t08164Z Brassica rapa HOM05D002336 ORTHO05D002526 1.7e-16 90.1 182 42.9
PSO210G4730 Papaver somniferum HOM05D002336 ORTHO05D002526 2.2e-16 89.7 189 34.9
Lalb_Chr18g0057441 Lupinus albus HOM05D002336 ORTHO05D002526 2.8e-16 89.4 159 40.9
BolC2t10989H Brassica oleracea HOM05D000111 ORTHO05D007071 3.7e-16 89.0 170 41.2
Duzib235G0330 Durio zibethinus HOM05D002336 ORTHO05D002526 6.3e-16 88.2 211 38.4
Ca_00777_v3 Cicer arietinum L. HOM05D000491 ORTHO05D000359 8.2e-16 87.8 167 38.9
AUR62017630 Chenopodium quinoa HOM05D002336 ORTHO05D002526 3.1e-15 85.9 121 46.3
Oeu025979.1 Olea europaea HOM05D002336 ORTHO05D002526 4.1e-15 85.5 165 40.6
Lj6g0012975 Lotus japonicus HOM05D002336 ORTHO05D002526 5.3e-15 85.1 180 37.2
TAR627G0858 Trochodendron aralioides HOM05D007127 ORTHO05D008803 5.3e-15 85.1 127 43.3
Aa31sc504G30 Aethionema arabicum HOM05D002336 ORTHO05D002526 6.9e-15 84.7 174 36.8
SGA_v2.0_scaffold186G40142 Striga asiatica HOM05D002336 ORTHO05D002526 9.1e-15 84.3 158 41.1
Phvul.006G135800 Phaseolus vulgaris HOM05D002336 ORTHO05D002526 1.2e-14 84.0 166 35.5
SalBow8G5548 Salvia bowleyana HOM05D002336 ORTHO05D002526 1.2e-14 84.0 162 43.8
FAN06G2551 Fragaria x ananassa HOM05D002336 ORTHO05D002526 1.5e-14 83.6 154 42.9
ECA248G2010 Erigeron canadensis HOM05D002336 ORTHO05D002526 1.7e-13 80.1 65 72.3
Glyma.15G121800 Glycine max HOM05D002336 ORTHO05D002526 2.9e-13 79.3 167 36.5
Zm00001eb189090 Zea mays HOM05D002336 ORTHO05D002526 5.0e-13 78.6 90 46.7
CDE07G0676 Ceratophyllum demersum HOM05D002336 ORTHO05D002526 6.5e-13 78.2 99 45.5
Aqoxy3G03324 Aquilegia oxysepala HOM05D002336 ORTHO05D002526 8.5e-13 77.8 205 33.7
CARHR290530 Cardamine hirsuta HOM05D002336 ORTHO05D002526 3.2e-12 75.9 167 35.3
Ah.01g002070 Amaranthus hybridus HOM05D002336 ORTHO05D002526 7.2e-12 74.7 126 41.3
HPP92_000509 Vanilla planifolia HOM05D002336 ORTHO05D002526 2.7e-11 72.8 162 36.4
Os02g0723300 Oryza sativa ssp. japonica HOM05D002336 ORTHO05D002526 4.7e-11 72.0 157 35.7
AUR62014931 Chenopodium quinoa HOM05D002336 ORTHO05D002526 6.1e-11 71.6 190 34.2
Oeu031381.1 Olea europaea HOM05D002336 ORTHO05D002526 8.0e-11 71.2 152 37.5
Peaxi162Scf00604g00013 Petunia axillaris HOM05D002336 ORTHO05D002526 1.8e-10 70.1 73 49.3
ATR0751G251 Amborella trichopoda HOM05D002336 ORTHO05D002526 8.8e-10 67.8 160 34.4
FAN06G5014 Fragaria x ananassa HOM05D002336 ORTHO05D002526 8.8e-10 67.8 102 50.0
Hund21625 Selenicereus undatus HOM05D002336 ORTHO05D002526 2.6e-09 66.2 147 36.7
Lj5g0017254 Lotus japonicus HOM05D002336 ORTHO05D002526 3.3e-09 65.9 78 44.9
DCAR_019144 Daucus carota HOM05D002336 ORTHO05D002526 4.1e-07 58.9 107 40.2
RcHm_v2.0_Chr6g0293821 Rosa chinensis HOM05D002336 ORTHO05D002526 5.9e-06 55.1 98 35.7


User provided reference genes

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