Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA067G0003 Erigeron canadensis HOM05D002270 ORTHO05D002866 3.2e-285 984.6 551 100.0
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 7.5e-194 681.0 969 47.8
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 9.7e-117 424.9 978 35.2
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 1.0e-105 388.3 965 35.4
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 8.0e-71 272.3 971 28.9
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 4.0e-70 270.0 992 28.3
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 2.7e-66 257.3 980 27.7
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.2e-61 241.9 806 29.9
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 2.6e-61 240.7 966 26.9
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 9.2e-59 232.3 781 30.5
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 8.6e-57 225.7 773 30.5
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.9e-56 224.6 807 29.5
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 3.6e-55 220.3 807 28.0
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 4.7e-55 219.9 807 28.0
MBI17_g19031_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D002866 4.7e-55 219.9 780 32.7
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 6.2e-55 219.5 976 26.2
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 8.1e-55 219.2 978 26.2
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 1.5e-53 214.9 979 26.6
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 4.4e-53 213.4 793 28.5
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 4.4e-53 213.4 808 27.2
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 8.4e-52 209.1 771 27.8
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 1.4e-51 208.4 975 26.2
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 1.4e-51 208.4 787 28.6
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 3.2e-51 207.2 972 25.8
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 2.1e-50 204.5 810 28.5
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 4.6e-50 203.4 821 26.7
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 7.8e-50 202.6 789 29.2
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 3.9e-49 200.3 793 26.9
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 5.1e-49 199.9 967 26.3
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 6.6e-49 199.5 973 26.1
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 1.9e-48 198.0 770 28.4
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 5.6e-48 196.4 755 28.6
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 2.1e-47 194.5 789 28.1
Ah.08g216550 Amaranthus hybridus HOM05D002270 ORTHO05D002866 2.8e-47 194.1 959 26.2
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 2.8e-47 194.1 782 29.0
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 4.7e-47 193.4 793 28.6
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 8.1e-47 192.6 814 27.0
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 2.4e-46 191.0 793 27.2
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 2.4e-46 191.0 782 32.9
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 2.4e-46 191.0 938 26.5
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 1.5e-45 188.3 807 27.3
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 1.5e-45 188.3 778 27.5
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 2.0e-45 188.0 816 26.8
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 4.4e-45 186.8 797 27.9
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 1.3e-44 185.3 798 26.8
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 2.2e-44 184.5 803 26.9
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 2.9e-44 184.1 796 27.5
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 4.9e-44 183.3 779 27.2
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 6.4e-44 183.0 759 27.4
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 1.9e-43 181.4 954 25.3
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 4.2e-43 180.3 788 25.9
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 9.3e-43 179.1 747 27.7
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 1.6e-42 178.3 774 27.0
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 2.7e-42 177.6 783 27.2
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 6.0e-42 176.4 796 27.3
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 1.3e-41 175.3 751 27.4
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 2.3e-41 174.5 778 27.0
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 4.3e-40 170.2 778 26.7
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 9.6e-40 169.1 920 24.6
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 4.0e-38 163.7 963 23.9
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 1.5e-37 161.8 785 25.6
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 2.0e-37 161.4 788 25.1
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 7.6e-37 159.5 765 26.4
TAR636G2809 Trochodendron aralioides HOM05D002270 ORTHO05D002866 2.9e-36 157.5 247 41.7
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 3.8e-36 157.1 956 23.4
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 1.4e-35 155.2 793 27.5
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 5.4e-35 153.3 788 24.9
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 9.3e-35 152.5 796 25.3
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 1.2e-34 152.1 766 26.2
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 4.6e-34 150.2 794 26.3
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 7.9e-34 149.4 335 32.5
QL03p018747 Quercus lobata HOM05D002270 ORTHO05D002866 7.9e-34 149.4 708 26.7
Eucgr.J02835 Eucalyptus grandis HOM05D002270 ORTHO05D002866 1.0e-33 149.1 105 71.4
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 1.0e-33 149.1 746 25.9
COL.COLO4_12564 Corchorus olitorius HOM05D002270 ORTHO05D002866 2.3e-33 147.9 199 46.7
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 5.1e-33 146.7 796 24.6
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 5.1e-33 146.7 162 52.5
Sed0006033 Sechium edule HOM05D002270 ORTHO05D002866 2.5e-32 144.4 105 70.5
Cpa.g.sc1872.2 Carica papaya HOM05D002270 ORTHO05D002866 3.3e-32 144.1 226 42.5
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 5.6e-32 143.3 976 23.7
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 3.7e-31 140.6 788 26.6
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 6.2e-31 139.8 774 25.1
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 8.1e-31 139.4 773 29.6
Hma1.2p1_0291F.1_g115290 Hydrangea macrophylla HOM05D002270 ORTHO05D002866 8.1e-31 139.4 220 42.3
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 1.4e-30 138.7 858 23.5
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 2.4e-30 137.9 963 23.4
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 5.3e-30 136.7 777 25.7
BcaNung06980 Brassica carinata HOM05D002270 ORTHO05D002866 4.5e-29 133.7 706 31.6
CDE12G0817 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 5.8e-29 133.3 205 43.9
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 9.9e-29 132.5 815 25.5
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 9.9e-29 132.5 777 26.5
FAN09G1018 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.3e-28 132.1 136 56.6
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 1.1e-27 129.0 765 28.4
Aqoxy6G02932 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 2.4e-27 127.9 86 74.4
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 3.2e-27 127.5 761 25.4
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 3.2e-27 127.5 816 24.9
VMungo0464G0658 Vigna mungo HOM05D002270 ORTHO05D002866 4.2e-27 127.1 619 27.0
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 1.6e-26 125.2 819 26.3
SEGI_09123 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 2.7e-26 124.4 83 72.3
SEGI_29020 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 2.7e-26 124.4 83 72.3
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 3.5e-26 124.0 776 28.0
BcaC07g41079 Brassica carinata HOM05D002270 ORTHO05D002866 7.9e-26 122.9 76 78.9
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 7.9e-26 122.9 776 28.0
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 1.0e-25 122.5 769 26.8
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 1.3e-25 122.1 776 27.8
CBR_g741 Chara braunii HOM05D002270 ORTHO05D002866 1.3e-25 122.1 81 71.6
SMO141G0258 Selaginella moellendorffii HOM05D002270 ORTHO05D002866 5.1e-25 120.2 83 68.7
Os10g0456900 Oryza sativa ssp. japonica HOM05D002270 ORTHO05D002866 6.7e-25 119.8 125 54.4
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 1.9e-24 118.2 773 23.8
COL.COLO4_12565 Corchorus olitorius HOM05D002270 ORTHO05D002866 5.6e-24 116.7 103 65.0
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 7.4e-24 116.3 777 24.1
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 9.6e-24 115.9 83 66.3
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 2.8e-23 114.4 746 27.6
SEGI_24649 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.4e-22 112.1 802 23.4
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis HOM05D002270 ORTHO05D002866 2.4e-22 111.3 124 52.4
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 2.4e-22 111.3 115 48.7
CDE12G0087 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 5.3e-22 110.2 244 36.5
SEGI_39597 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 2.0e-21 108.2 220 36.8
TPR.G9775 Trifolium pratense HOM05D002270 ORTHO05D002866 2.6e-21 107.8 194 40.7
TAR636G2258 Trochodendron aralioides HOM05D002270 ORTHO05D002866 3.4e-21 107.5 66 78.8
MCO14G006 Micromonas commoda HOM05D002270 ORTHO05D002866 2.2e-20 104.8 63 73.0
Cre03.g161800 Chlamydomonas reinhardtii HOM05D002270 ORTHO05D002866 2.9e-20 104.4 61 78.7
PRCOL_00003697 Prasinoderma coloniale HOM05D002270 ORTHO05D002866 2.9e-20 104.4 86 62.8
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 3.8e-20 104.0 736 24.3
TPR.G582 Trifolium pratense HOM05D002270 ORTHO05D002866 4.9e-20 103.6 79 65.8
VMungo1080G1592 Vigna mungo HOM05D002270 ORTHO05D002866 3.2e-19 100.9 53 88.7
TPR.G10921 Trifolium pratense HOM05D002270 ORTHO05D002866 1.3e-17 95.5 104 57.7
PGSC0003DMG400044228 Solanum tuberosum HOM05D002270 ORTHO05D002866 1.8e-17 95.1 78 67.9
Aqoxy6G02934 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 5.7e-16 90.1 215 33.0
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 6.9e-14 83.2 221 32.1
C05p38590 Brassica napus HOM05D002270 ORTHO05D002866 6.9e-14 83.2 221 32.1
BolC5t32597H Brassica oleracea HOM05D002270 ORTHO05D002866 6.9e-14 83.2 221 32.1
SEGI_08864 Sequoiadendron giganteum HOM05D002270 ORTHO05D012099 8.8e-09 66.2 145 31.7
Cpa.g.sc30.6 Carica papaya HOM05D002270 ORTHO05D002866 2.2e-07 61.6 133 33.8


User provided reference genes

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