Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 8.6e-145 516.9 253 100.0
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 6.5e-84 314.7 267 66.3
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 3.9e-81 305.4 267 64.8
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 6.9e-78 294.7 268 63.8
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 9.1e-78 294.3 268 62.7
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 1.2e-77 293.9 266 63.9
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 2.0e-77 293.1 267 64.4
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 1.7e-76 290.0 267 63.7
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 7.4e-72 274.6 273 57.5
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 1.3e-71 273.9 269 57.2
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 4.8e-71 271.9 270 56.7
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 6.3e-71 271.6 268 56.7
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 1.4e-70 270.4 269 56.5
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 1.4e-70 270.4 268 60.1
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 1.3e-68 263.8 280 54.3
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 1.7e-68 263.5 266 56.0
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 1.9e-67 260.0 266 55.3
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 1.9e-67 260.0 264 54.5
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.2e-67 258.8 269 55.8
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 4.2e-67 258.8 270 54.1
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 7.2e-67 258.1 267 55.8
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 9.4e-67 257.7 264 56.1
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 1.2e-66 257.3 266 55.3
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 8.0e-66 254.6 265 51.7
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 1.8e-65 253.4 269 55.8
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 6.7e-65 251.5 265 54.3
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 8.8e-65 251.1 271 54.6
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 8.8e-65 251.1 271 54.6
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 1.2e-64 250.8 269 53.2
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 1.2e-64 250.8 269 53.5
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 2.6e-64 249.6 269 53.9
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 2.6e-64 249.6 265 54.3
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 4.4e-64 248.8 271 53.1
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 4.4e-64 248.8 265 53.6
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 7.5e-64 248.1 269 54.3
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 9.7e-64 247.7 268 53.4
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 1.3e-63 247.3 271 53.9
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 1.7e-63 246.9 271 53.9
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 2.2e-63 246.5 269 53.9
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 2.2e-63 246.5 266 53.0
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 2.8e-63 246.1 271 52.4
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 6.3e-63 245.0 269 52.8
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.4e-62 243.8 271 51.7
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.4e-62 243.8 269 54.6
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 1.4e-62 243.8 269 51.7
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 1.8e-62 243.4 269 52.4
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.8e-62 243.4 268 55.2
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 3.1e-62 242.7 269 53.2
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 3.1e-62 242.7 271 51.7
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 5.3e-62 241.9 266 54.1
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 7.0e-62 241.5 267 51.3
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 7.0e-62 241.5 265 52.8
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 7.0e-62 241.5 267 52.1
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 9.1e-62 241.1 256 54.3
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 1.2e-61 240.7 266 52.3
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 2.7e-61 239.6 265 53.2
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 5.9e-61 238.4 266 50.8
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 2.2e-60 236.5 267 50.2
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 5.0e-60 235.3 266 50.8
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 5.0e-60 235.3 268 53.4
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 2.5e-59 233.0 271 51.3
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 3.2e-59 232.6 268 51.5
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 5.5e-59 231.9 265 50.2
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 7.2e-59 231.5 266 49.2
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 1.2e-58 230.7 266 49.6
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 1.6e-58 230.3 267 50.6
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 2.1e-58 229.9 269 49.8
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 3.6e-58 229.2 267 50.6
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 6.1e-58 228.4 267 50.2
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 6.1e-58 228.4 254 52.0
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 8.0e-58 228.0 267 50.2
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 8.0e-58 228.0 269 49.1
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 1.0e-57 227.6 267 50.2
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 1.0e-57 227.6 267 50.2
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 1.4e-57 227.3 264 49.6
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 3.0e-57 226.1 269 52.4
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 3.0e-57 226.1 266 50.0
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 2.0e-56 223.4 267 49.8
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.0e-56 223.4 267 49.8
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.4e-56 222.6 265 49.1
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 4.4e-56 222.2 265 49.1
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 1.3e-55 220.7 271 48.7
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 2.8e-55 219.5 269 47.6
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 3.7e-55 219.2 269 47.6
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 7.0e-54 214.9 266 46.6
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 9.1e-54 214.5 267 49.4
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 1.6e-53 213.8 269 47.6
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.3e-52 210.7 266 48.1
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 2.9e-52 209.5 268 47.0
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 8.6e-52 208.0 269 46.8
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 3.3e-51 206.1 266 47.0
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 5.5e-51 205.3 249 51.4
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 7.2e-51 204.9 266 46.6
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 1.6e-50 203.8 249 51.0
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 8.0e-50 201.4 265 46.0
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 4.9e-47 192.2 266 44.7
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 2.4e-46 189.9 269 43.1
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.9e-43 180.3 266 45.1
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 1.9e-43 180.3 220 50.0
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 1.9e-43 180.3 251 45.4
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 9.5e-43 177.9 250 43.6
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 2.8e-42 176.4 266 42.1
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 5.4e-38 162.2 160 50.6
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 7.0e-38 161.8 144 56.2
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 1.0e-36 157.9 278 37.8
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 6.2e-34 148.7 317 37.2
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 5.8e-32 142.1 144 57.6
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 1.7e-31 140.6 251 38.2
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 6.4e-31 138.7 245 39.6
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 8.3e-31 138.3 264 38.3
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.7e-29 133.3 90 65.6
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 2.3e-25 120.2 84 67.9
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 3.7e-23 112.8 88 58.0
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 6.4e-23 112.1 309 30.4
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 3.3e-19 99.8 136 48.5
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 1.5e-16 90.9 234 30.8
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.8e-15 86.3 84 59.5
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 3.2e-14 83.2 109 49.5
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 9.2e-14 81.6 87 64.4
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 1.6e-13 80.9 46 71.7


User provided reference genes

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