Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib205G1630 Durio zibethinus HOM05D001384 ORTHO05D001215 2.1e-18 95.1 66 100.0
Thecc.03G192400 Theobroma cacao HOM05D001384 ORTHO05D001215 2.3e-12 75.1 66 68.2
TAR375G0324 Trochodendron aralioides HOM05D001384 ORTHO05D001215 1.0e-09 66.2 65 60.0
TWI15G0052 Tripterygium wilfordii HOM05D001384 ORTHO05D001215 2.3e-09 65.1 65 72.3
TAR636G2986 Trochodendron aralioides HOM05D001384 ORTHO05D001215 4.0e-09 64.3 65 67.7
THA.LOC104821373 Tarenaya hassleriana HOM05D001384 ORTHO05D001215 5.2e-09 63.9 66 59.1
TWI39G0811 Tripterygium wilfordii HOM05D001384 ORTHO05D001215 5.2e-09 63.9 66 68.2
CiPaw.11G124600 Carya illinoinensis HOM05D001384 ORTHO05D001215 6.8e-09 63.5 66 62.1
Manes.14G018800 Manihot esculenta HOM05D001384 ORTHO05D001215 6.8e-09 63.5 66 53.0
ClCG07G014860 Citrullus lanatus HOM05D001384 ORTHO05D001215 8.9e-09 63.2 65 60.0
Actinidia27339 Actinidia chinensis HOM05D001384 ORTHO05D001215 1.5e-08 62.4 65 56.9
CsaV3_4G006390 Cucumis sativus L. HOM05D001384 ORTHO05D001215 1.5e-08 62.4 65 60.0
PGR042G2194 Punica granatum HOM05D001384 ORTHO05D001215 1.5e-08 62.4 66 63.6
TWI14G0223 Tripterygium wilfordii HOM05D001384 ORTHO05D001215 1.5e-08 62.4 66 65.2
Cpa.g.sc3.48 Carica papaya HOM05D001384 ORTHO05D001215 2.0e-08 62.0 66 54.5
Aqoxy5G04117 Aquilegia oxysepala HOM05D001384 ORTHO05D001215 2.6e-08 61.6 65 66.2
AL6G35460 Arabidopsis lyrata HOM05D001384 ORTHO05D001215 2.6e-08 61.6 66 66.7
Dinv37556 Davidia involucrata HOM05D001384 ORTHO05D001215 2.6e-08 61.6 65 55.4
MBI07_g20448_MAGBIO Magnolia biondii HOM05D001384 ORTHO05D001215 2.6e-08 61.6 65 53.8
TWI81G0992 Tripterygium wilfordii HOM05D001384 ORTHO05D001215 2.6e-08 61.6 65 52.3
GSVIVG01028741001 Vitis vinifera HOM05D001384 ORTHO05D001215 2.6e-08 61.6 65 58.5
CARHR189480 Cardamine hirsuta HOM05D001384 ORTHO05D001215 3.4e-08 61.2 66 63.6
THA.LOC109116865 Tarenaya hassleriana HOM05D001384 ORTHO05D001215 4.4e-08 60.8 66 56.1
QL02p031550 Quercus lobata HOM05D001384 ORTHO05D001215 5.8e-08 60.5 65 56.9
Aa31LG3G9260 Aethionema arabicum HOM05D001384 ORTHO05D001215 9.8e-08 59.7 66 54.5
AT5G24105 Arabidopsis thaliana HOM05D001384 ORTHO05D001215 9.8e-08 59.7 66 56.1
BcaC04g23523 Brassica carinata HOM05D001384 ORTHO05D001215 9.8e-08 59.7 66 53.0
A09p06620 Brassica napus HOM05D001384 ORTHO05D001215 9.8e-08 59.7 66 53.0
C09p07390 Brassica napus HOM05D001384 ORTHO05D001215 9.8e-08 59.7 66 53.0
BolC9t53653H Brassica oleracea HOM05D001384 ORTHO05D001215 9.8e-08 59.7 66 53.0
BraA09t36309Z Brassica rapa HOM05D001384 ORTHO05D001215 9.8e-08 59.7 66 53.0
Ciclev10023159m.g Citrus clementina HOM05D001384 ORTHO05D001215 9.8e-08 59.7 69 71.0
Carub.0006s2183 Capsella rubella HOM05D001384 ORTHO05D001215 1.3e-07 59.3 66 54.5
MELO3C032818.2 Cucumis melo HOM05D001384 ORTHO05D001215 1.3e-07 59.3 65 58.5
MD01G1214900 Malus domestica HOM05D001384 ORTHO05D001215 1.7e-07 58.9 67 59.7
CiPaw.05G258000 Carya illinoinensis HOM05D001384 ORTHO05D001215 2.2e-07 58.5 66 72.7
CSS0003232 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 2.9e-07 58.2 67 59.7
CSS0021424 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 2.9e-07 58.2 65 56.9
Potri.015G022600 Populus trichocarpa HOM05D001384 ORTHO05D001215 2.9e-07 58.2 67 55.2
AT5G53250 Arabidopsis thaliana HOM05D001384 ORTHO05D001215 3.7e-07 57.8 66 57.6
FAN06G1205 Fragaria x ananassa HOM05D001384 ORTHO05D001215 3.7e-07 57.8 67 52.2
Manes.05G026100 Manihot esculenta HOM05D001384 ORTHO05D001215 3.7e-07 57.8 62 67.7
CARHR266300 Cardamine hirsuta HOM05D001384 ORTHO05D001215 4.9e-07 57.4 66 68.2
CDE03G0448 Ceratophyllum demersum HOM05D001384 ORTHO05D001215 4.9e-07 57.4 65 53.8
Potri.012G032000 Populus trichocarpa HOM05D001384 ORTHO05D001215 4.9e-07 57.4 67 56.7
Sed0009789 Sechium edule HOM05D001384 ORTHO05D001215 4.9e-07 57.4 65 53.8
Manes.06G156900 Manihot esculenta HOM05D001384 ORTHO05D001215 6.4e-07 57.0 66 53.0
A06p34940 Brassica napus HOM05D001384 ORTHO05D001215 8.3e-07 56.6 66 53.0
C07p43610 Brassica napus HOM05D001384 ORTHO05D001215 8.3e-07 56.6 66 53.0
BolC7t44888H Brassica oleracea HOM05D001384 ORTHO05D001215 8.3e-07 56.6 66 53.0
FAN06G2829 Fragaria x ananassa HOM05D001384 ORTHO05D001215 8.3e-07 56.6 67 52.2
BraA06t26418Z Brassica rapa HOM05D001384 ORTHO05D001215 1.1e-06 56.2 66 53.0
Carub.0008s1343 Capsella rubella HOM05D001384 ORTHO05D001215 1.1e-06 56.2 66 54.5
MBI06_g32761_MAGBIO Magnolia biondii HOM05D001384 ORTHO05D001215 1.1e-06 56.2 65 52.3
AL8G27900 Arabidopsis lyrata HOM05D001384 ORTHO05D001215 1.4e-06 55.8 66 56.1
Cc02_g01910 Coffea canephora HOM05D001384 ORTHO05D001215 1.4e-06 55.8 64 70.3
RcHm_v2.0_Chr1g0380071 Rosa chinensis HOM05D001384 ORTHO05D001215 1.4e-06 55.8 60 56.7
Thecc.03G292300 Theobroma cacao HOM05D001384 ORTHO05D001215 1.4e-06 55.8 65 56.9
BcaC03g14439 Brassica carinata HOM05D001384 ORTHO05D001215 1.9e-06 55.5 66 54.5
C02p18530 Brassica napus HOM05D001384 ORTHO05D001215 1.9e-06 55.5 66 54.5
BolC2t07993H Brassica oleracea HOM05D001384 ORTHO05D001215 1.9e-06 55.5 66 54.5
CAN.G532.91 Capsicum annuum HOM05D001384 ORTHO05D001215 1.9e-06 55.5 63 54.0
Nitab4.5_0000223g0120 Nicotiana tabacum HOM05D001384 ORTHO05D001215 1.9e-06 55.5 62 53.2
Sopen08g030260 Solanum pennellii HOM05D001384 ORTHO05D001215 1.9e-06 55.5 63 52.4
THA.LOC104817336 Tarenaya hassleriana HOM05D001384 ORTHO05D001215 1.9e-06 55.5 62 53.2
BcaB05g22027 Brassica carinata HOM05D001384 ORTHO05D001215 2.4e-06 55.1 66 65.2
A02p11180 Brassica napus HOM05D001384 ORTHO05D001215 2.4e-06 55.1 66 65.2
A10p10780 Brassica napus HOM05D001384 ORTHO05D001215 2.4e-06 55.1 66 65.2
BraA02t06181Z Brassica rapa HOM05D001384 ORTHO05D001215 2.4e-06 55.1 66 65.2
BraA10t43159Z Brassica rapa HOM05D001384 ORTHO05D001215 2.4e-06 55.1 66 65.2
Nitab4.5_0004161g0070 Nicotiana tabacum HOM05D001384 ORTHO05D001215 2.4e-06 55.1 62 53.2
Prupe.2G306800 Prunus persica HOM05D001384 ORTHO05D001215 2.4e-06 55.1 64 48.4
Sed0024129 Sechium edule HOM05D001384 ORTHO05D001215 2.4e-06 55.1 65 52.3
Thecc.01G347500 Theobroma cacao HOM05D001384 ORTHO05D001215 2.4e-06 55.1 62 51.6
BcaC01g06232 Brassica carinata HOM05D001384 ORTHO05D001215 3.2e-06 54.7 66 59.1
BcaC01g06233 Brassica carinata HOM05D001384 ORTHO05D001215 3.2e-06 54.7 66 59.1
BolC3t14192H Brassica oleracea HOM05D001384 ORTHO05D001215 3.2e-06 54.7 66 59.1
Duzib133G0751 Durio zibethinus HOM05D001384 ORTHO05D001215 3.2e-06 54.7 62 50.0
FvH4_7g30990 Fragaria vesca HOM05D001384 ORTHO05D001215 3.2e-06 54.7 67 53.7
Manes.02G013300 Manihot esculenta HOM05D001384 ORTHO05D001215 3.2e-06 54.7 66 56.1
Oeu030571.1 Olea europaea HOM05D001384 ORTHO05D001215 3.2e-06 54.7 63 49.2
Potri.003G136600 Populus trichocarpa HOM05D001384 ORTHO05D001215 3.2e-06 54.7 63 63.5
CsaV3_3G021920 Cucumis sativus L. HOM05D001384 ORTHO05D001215 4.1e-06 54.3 71 66.2
FAN10G2526 Fragaria x ananassa HOM05D001384 ORTHO05D001215 4.1e-06 54.3 69 56.5
FAN10G2635 Fragaria x ananassa HOM05D001384 ORTHO05D001215 4.1e-06 54.3 69 56.5
PGSC0003DMG400012165 Solanum tuberosum HOM05D001384 ORTHO05D001215 4.1e-06 54.3 63 52.4
BcaC04g20479 Brassica carinata HOM05D001384 ORTHO05D001215 5.4e-06 53.9 66 63.6
A03p15270 Brassica napus HOM05D001384 ORTHO05D001215 5.4e-06 53.9 66 63.6
C09p43060 Brassica napus HOM05D001384 ORTHO05D001215 5.4e-06 53.9 66 63.6
BolC9t57176H Brassica oleracea HOM05D001384 ORTHO05D001215 5.4e-06 53.9 66 63.6
Dinv32554 Davidia involucrata HOM05D001384 ORTHO05D001215 5.4e-06 53.9 65 55.4
Oeu036887.1 Olea europaea HOM05D001384 ORTHO05D001215 5.4e-06 53.9 67 53.7
Sed0001168 Sechium edule HOM05D001384 ORTHO05D001215 5.4e-06 53.9 64 54.7
Solyc08g081970.3 Solanum lycopersicum HOM05D001384 ORTHO05D001215 5.4e-06 53.9 63 52.4
Actinidia28493 Actinidia chinensis HOM05D001384 ORTHO05D001215 7.0e-06 53.5 65 47.7
BcaNung01209 Brassica carinata HOM05D001384 ORTHO05D001215 7.0e-06 53.5 66 50.0
CiPaw.01G072100 Carya illinoinensis HOM05D001384 ORTHO05D001215 7.0e-06 53.5 62 48.4
Hma1.2p1_0384F.1_g141070 Hydrangea macrophylla HOM05D001384 ORTHO05D001215 7.0e-06 53.5 65 47.7
PGR042G1428 Punica granatum HOM05D001384 ORTHO05D001215 7.0e-06 53.5 66 51.5
SalBow1G1836 Salvia bowleyana HOM05D001384 ORTHO05D001215 7.0e-06 53.5 67 52.2
SalBow1G7997 Salvia bowleyana HOM05D001384 ORTHO05D001215 7.0e-06 53.5 67 52.2
THA.LOC109117149 Tarenaya hassleriana HOM05D001384 ORTHO05D001215 7.0e-06 53.5 66 50.0
HPP92_026774 Vanilla planifolia HOM05D001384 ORTHO05D001215 7.0e-06 53.5 64 60.9
arahy.Tifrunner.gnm1.ann1.Y9NP63 Arachis hypogaea HOM05D001384 ORTHO05D001215 9.2e-06 53.1 68 54.4
BcaB08g35687 Brassica carinata HOM05D001384 ORTHO05D001215 9.2e-06 53.1 66 62.1
Haze_08680 Corylus avellana HOM05D001384 ORTHO05D001215 9.2e-06 53.1 65 49.2
Thhalv10015233m.g Eutrema salsugineum HOM05D001384 ORTHO05D001215 9.2e-06 53.1 66 54.5
Gohir.A12G234600 Gossypium hirsutum HOM05D001384 ORTHO05D001215 9.2e-06 53.1 66 53.0
Os01g0657000 Oryza sativa ssp. japonica HOM05D001384 ORTHO05D001215 9.2e-06 53.1 63 49.2
Sp6g15410 Schrenkiella parvula HOM05D001384 ORTHO05D001215 9.2e-06 53.1 66 63.6


User provided reference genes

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