Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 0.0e+00 1107.4 569 100.0
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 4.5e-266 921.0 610 81.0
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 2.1e-260 902.1 613 78.5
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 5.8e-258 894.0 613 78.1
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 1.8e-254 882.5 613 77.2
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 1.8e-251 872.5 616 76.6
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 5.7e-197 691.4 628 60.8
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 3.7e-196 688.7 617 60.3
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 1.4e-195 686.8 627 59.8
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 4.1e-195 685.3 656 58.2
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 2.5e-192 676.0 619 59.8
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 1.6e-191 673.3 619 59.8
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 1.4e-190 670.2 656 57.5
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 7.5e-189 664.5 613 59.2
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 3.2e-187 659.1 620 59.0
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 3.5e-186 655.6 622 58.7
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 4.7e-183 645.2 642 57.2
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 5.2e-182 641.7 621 58.3
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 3.7e-180 635.6 620 57.7
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 4.9e-180 635.2 620 57.6
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 8.3e-180 634.4 627 57.6
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 2.7e-178 629.4 637 56.5
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 1.3e-177 627.1 620 56.6
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 4.3e-176 622.1 621 57.5
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.3e-172 610.5 619 56.2
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 1.7e-172 610.1 621 56.5
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 8.3e-172 607.8 621 56.4
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 1.2e-170 604.0 621 54.8
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 1.2e-170 604.0 624 56.6
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 3.9e-169 599.0 634 54.6
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 1.6e-167 593.6 624 54.0
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 1.6e-167 593.6 632 54.4
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 2.4e-166 589.7 592 56.1
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 2.1e-162 576.6 624 52.4
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 2.7e-162 576.2 621 54.4
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 4.3e-160 568.9 608 53.8
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 1.2e-159 567.4 616 52.1
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 1.2e-159 567.4 619 53.5
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 3.6e-159 565.8 620 52.9
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 2.4e-158 563.1 616 53.7
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 3.1e-158 562.8 618 51.9
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 9.0e-158 561.2 612 52.0
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 1.2e-157 560.8 640 50.9
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 1.5e-157 560.5 599 52.4
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 2.0e-157 560.1 624 51.8
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 2.6e-157 559.7 519 60.3
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 3.4e-157 559.3 609 52.1
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 9.9e-157 557.8 609 52.5
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 2.2e-156 556.6 612 52.9
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 2.9e-156 556.2 618 51.9
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 1.4e-155 553.9 572 54.9
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 9.3e-155 551.2 621 52.7
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 1.0e-153 547.7 619 51.4
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 2.1e-151 540.0 627 51.0
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 1.2e-149 534.3 620 51.0
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 2.0e-149 533.5 607 50.6
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 1.9e-147 526.9 621 51.0
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 5.4e-147 525.4 534 53.7
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 2.3e-145 520.0 683 47.1
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 6.7e-145 518.5 577 53.6
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 1.5e-144 517.3 615 49.4
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 4.3e-144 515.8 623 49.3
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 4.3e-144 515.8 618 50.3
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 7.4e-144 515.0 547 54.7
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 9.6e-144 514.6 657 48.7
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 6.2e-143 511.9 617 49.6
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 8.1e-143 511.5 621 49.3
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 1.1e-142 511.1 622 50.2
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 1.8e-142 510.4 634 48.3
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 6.9e-142 508.4 613 49.1
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 9.0e-142 508.1 577 50.6
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 1.7e-140 503.8 581 50.3
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 3.5e-138 496.1 577 49.7
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 7.9e-138 495.0 614 48.4
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 1.3e-137 494.2 589 52.1
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 1.9e-136 490.3 606 48.5
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 2.5e-136 490.0 615 47.6
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 1.3e-135 487.6 577 49.2
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 1.4e-134 484.2 521 52.0
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 1.8e-134 483.8 616 48.9
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 3.8e-132 476.1 558 49.6
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 4.9e-132 475.7 653 46.7
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 6.5e-132 475.3 516 50.2
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 1.4e-131 474.2 631 46.1
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 1.6e-130 470.7 542 49.4
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 2.7e-130 469.9 680 45.0
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 1.9e-128 463.8 643 47.6
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 1.4e-123 447.6 638 45.3
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 7.4e-120 435.3 497 50.3
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 2.2e-116 423.7 648 42.7
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 1.4e-115 421.0 626 44.9
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.5e-115 419.1 430 54.0
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 2.7e-114 416.8 616 42.7
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 7.9e-114 415.2 410 54.9
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 1.4e-113 414.5 577 46.6
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 2.6e-109 400.2 612 41.2
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 4.1e-102 376.3 526 42.2
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 4.5e-77 293.1 514 38.1
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 1.3e-76 291.6 453 42.6
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 2.3e-76 290.8 533 36.6
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 2.9e-76 290.4 500 37.0
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 3.2e-70 270.4 302 54.6
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 8.6e-68 262.3 586 34.3
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 3.2e-46 190.7 161 62.7
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 9.6e-43 179.1 165 57.6
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 4.7e-42 176.8 278 38.1
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 7.1e-30 136.3 380 28.4
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 5.3e-25 120.2 352 27.8
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 2.0e-24 118.2 123 54.5
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 4.6e-21 107.1 347 28.5
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.0e-20 104.4 126 53.2
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.0e-20 104.4 126 53.2
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.5e-19 102.1 126 52.4
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.5e-19 102.1 126 52.4
Actinidia17422 Actinidia chinensis HOM05D006562 ORTHO05D008230 6.9e-17 93.2 161 38.5
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 1.7e-15 88.6 68 67.6
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 1.9e-14 85.1 114 41.2
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 1.0e-12 79.3 357 26.6
Aa31LG4G7730 Aethionema arabicum HOM05D004094 ORTHO05D004601 1.7e-07 62.0 291 23.4
CARHR071130 Cardamine hirsuta HOM05D004094 ORTHO05D004601 2.9e-07 61.2 285 24.2
Cre12.g521200 Chlamydomonas reinhardtii HOM05D004977 ORTHO05D006454 6.5e-07 60.1 273 24.2
AL2G37830 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 4.2e-06 57.4 307 24.8
Lalb_Chr01g0005801 Lupinus albus HOM05D004977 ORTHO05D006454 5.5e-06 57.0 307 20.8
Sp5g32780 Schrenkiella parvula HOM05D004094 ORTHO05D004601 5.5e-06 57.0 289 22.8
MCO16G356 Micromonas commoda HOM05D004977 ORTHO05D006454 7.2e-06 56.6 256 21.9
Solyc07g005880.3 Solanum lycopersicum HOM05D004977 ORTHO05D006454 9.4e-06 56.2 309 21.0
Sopen07g001990 Solanum pennellii HOM05D004977 ORTHO05D006454 9.4e-06 56.2 309 21.0


User provided reference genes

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