Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib177G0198 Durio zibethinus HOM05D004480 ORTHO05D005546 6.6e-227 790.4 412 100.0
Thecc.05G221800 Theobroma cacao HOM05D004480 ORTHO05D005546 4.3e-194 681.4 396 89.4
Gohir.D08G023800 Gossypium hirsutum HOM05D004480 ORTHO05D005546 7.8e-188 660.6 398 87.7
Gohir.A08G013400 Gossypium hirsutum HOM05D004480 ORTHO05D005546 1.7e-187 659.4 398 87.4
Gorai.004G019100 Gossypium raimondii HOM05D004480 ORTHO05D005546 1.5e-186 656.4 398 86.9
Duzib128G0969 Durio zibethinus HOM05D004480 ORTHO05D005546 8.7e-179 630.6 396 83.6
Manes.17G005700 Manihot esculenta HOM05D004480 ORTHO05D005546 3.0e-163 578.9 404 75.5
QL11p020579 Quercus lobata HOM05D004480 ORTHO05D005546 7.4e-162 574.3 401 74.3
Ciclev10008180m.g Citrus clementina HOM05D004480 ORTHO05D005546 1.6e-161 573.2 405 73.1
Actinidia18384 Actinidia chinensis HOM05D004480 ORTHO05D005546 2.4e-160 569.3 399 74.7
CiPaw.01G203500 Carya illinoinensis HOM05D004480 ORTHO05D005546 2.0e-159 566.2 407 74.0
Cfa008538 Carpinus fangiana HOM05D004480 ORTHO05D005546 1.3e-158 563.5 407 73.2
Hma1.2p1_0513F.1_g169740 Hydrangea macrophylla HOM05D004480 ORTHO05D005546 1.3e-158 563.5 405 73.3
RcHm_v2.0_Chr1g0334711 Rosa chinensis HOM05D004480 ORTHO05D005546 1.3e-158 563.5 403 74.4
GSVIVG01038269001 Vitis vinifera HOM05D004480 ORTHO05D005546 1.9e-157 559.7 403 73.0
MD01G1035500 Malus domestica HOM05D004480 ORTHO05D005546 4.2e-157 558.5 403 73.4
MD15G1320300 Malus domestica HOM05D004480 ORTHO05D005546 4.2e-157 558.5 404 73.3
RcHm_v2.0_Chr7g0210541 Rosa chinensis HOM05D004480 ORTHO05D005546 5.5e-157 558.1 403 73.4
Dinv39175 Davidia involucrata HOM05D004480 ORTHO05D005546 9.4e-157 557.4 404 73.5
Rhsim09G0001300 Rhododendron simsii HOM05D004480 ORTHO05D005546 1.2e-156 557.0 405 74.1
FAN03G0050 Fragaria x ananassa HOM05D004480 ORTHO05D005546 2.7e-156 555.8 409 70.9
FAN01G1951 Fragaria x ananassa HOM05D004480 ORTHO05D005546 4.6e-156 555.1 402 72.4
Prupe.5G084300 Prunus persica HOM05D004480 ORTHO05D005546 1.4e-155 553.5 421 70.5
Atru.chr11.1453 Acer truncatum HOM05D004480 ORTHO05D005546 1.5e-154 550.1 401 71.8
Atru.chr11.1483 Acer truncatum HOM05D004480 ORTHO05D005546 1.5e-154 550.1 401 71.8
COL.COLO4_23990 Corchorus olitorius HOM05D004480 ORTHO05D005546 1.5e-154 550.1 402 74.9
Glyma.18G043300 Glycine max HOM05D004480 ORTHO05D005546 1.1e-152 543.9 399 71.9
Phvul.001G227600 Phaseolus vulgaris HOM05D004480 ORTHO05D005546 1.1e-152 543.9 400 73.5
Potri.017G001100 Populus trichocarpa HOM05D004480 ORTHO05D005546 1.1e-152 543.9 401 73.3
SGA_v2.0_scaffold25G11023 Striga asiatica HOM05D004480 ORTHO05D005546 1.1e-152 543.9 417 72.4
Ca_17076_v3 Cicer arietinum L. HOM05D004480 ORTHO05D005546 2.4e-152 542.7 400 72.0
PGR119G0799 Punica granatum HOM05D004480 ORTHO05D005546 3.4e-151 538.9 397 72.0
Nn7g35785 Nelumbo nucifera HOM05D004480 ORTHO05D005546 4.5e-151 538.5 404 70.8
vmacro20035 Vaccinium macrocarpon HOM05D004480 ORTHO05D005546 4.5e-151 538.5 412 71.1
PGR083G0026 Punica granatum HOM05D004480 ORTHO05D005546 1.0e-150 537.3 397 71.8
Lj1g0018422 Lotus japonicus HOM05D004480 ORTHO05D005546 3.8e-150 535.4 399 71.9
MSTRG.22059 Avicennia marina HOM05D004480 ORTHO05D005546 8.5e-150 534.3 422 68.5
Cc03_g16200 Coffea canephora HOM05D004480 ORTHO05D005546 8.5e-150 534.3 402 72.1
FvH4_4g10760 Fragaria vesca HOM05D004480 ORTHO05D005546 1.4e-149 533.5 402 69.4
SGA_v2.0_scaffold19G08907 Striga asiatica HOM05D004480 ORTHO05D005546 1.4e-149 533.5 409 72.6
vmacro00734 Vaccinium macrocarpon HOM05D004480 ORTHO05D005546 1.9e-149 533.1 445 67.4
CSS0010781 Camellia sinensis var. sinensis HOM05D004480 ORTHO05D005546 2.5e-149 532.7 405 73.8
Eucgr.H00240 Eucalyptus grandis HOM05D004480 ORTHO05D005546 2.5e-149 532.7 398 72.4
FAN06G1845 Fragaria x ananassa HOM05D004480 ORTHO05D005546 5.5e-149 531.6 394 70.1
Sed0006001 Sechium edule HOM05D004480 ORTHO05D005546 5.5e-149 531.6 413 70.9
arahy.Tifrunner.gnm1.ann1.0BX3U4 Arachis hypogaea HOM05D004480 ORTHO05D005546 1.6e-148 530.0 396 71.7
FAN12G3644 Fragaria x ananassa HOM05D004480 ORTHO05D005546 1.6e-148 530.0 402 69.2
SalBow1G2458 Salvia bowleyana HOM05D004480 ORTHO05D005546 2.7e-148 529.3 405 69.9
CsaV3_3G003300 Cucumis sativus L. HOM05D004480 ORTHO05D005546 4.7e-148 528.5 412 69.7
Oeu019179.1 Olea europaea HOM05D004480 ORTHO05D005546 1.8e-147 526.6 411 69.1
MBI07_g30868_MAGBIO Magnolia biondii HOM05D004480 ORTHO05D005546 5.1e-147 525.0 435 65.1
THA.LOC104827565 Tarenaya hassleriana HOM05D004480 ORTHO05D005546 5.1e-147 525.0 402 71.1
Lalb_Chr08g0233091 Lupinus albus HOM05D004480 ORTHO05D005546 1.1e-146 523.9 403 71.2
MELO3C013997.2 Cucumis melo HOM05D004480 ORTHO05D005546 4.4e-146 521.9 411 69.3
CANSAT21G2297 Cannabis sativa HOM05D004480 ORTHO05D005546 9.7e-146 520.8 404 69.6
Medtr4g094615 Medicago truncatula HOM05D004480 ORTHO05D005546 6.3e-145 518.1 400 68.5
BcaB01g00536 Brassica carinata HOM05D004480 ORTHO05D005546 1.1e-144 517.3 404 69.1
BraA03t13931Z Brassica rapa HOM05D004480 ORTHO05D005546 9.1e-144 514.2 407 67.3
A03p48230 Brassica napus HOM05D004480 ORTHO05D005546 1.2e-143 513.8 404 67.6
Solyc01g007120.3 Solanum lycopersicum HOM05D004480 ORTHO05D005546 1.5e-143 513.5 402 66.9
VMungo1383G0315 Vigna mungo HOM05D004480 ORTHO05D005546 2.0e-143 513.1 398 70.4
Sopen01g003100 Solanum pennellii HOM05D004480 ORTHO05D005546 5.9e-143 511.5 405 67.2
FAN12G1968 Fragaria x ananassa HOM05D004480 ORTHO05D005546 2.2e-142 509.6 395 67.8
TWI74G1000 Tripterygium wilfordii HOM05D004480 ORTHO05D005546 2.9e-142 509.2 403 69.0
Nitab4.5_0002844g0040 Nicotiana tabacum HOM05D004480 ORTHO05D005546 6.5e-142 508.1 414 65.5
Sc03g0007800 Simmondsia chinensis HOM05D004480 ORTHO05D005546 6.5e-142 508.1 416 66.8
Hund12181 Selenicereus undatus HOM05D004480 ORTHO05D005546 8.5e-142 507.7 404 68.3
TAR626G1520 Trochodendron aralioides HOM05D004480 ORTHO05D005546 1.1e-141 507.3 438 64.8
Migut.N03010 Erythranthe guttata HOM05D004480 ORTHO05D005546 1.9e-141 506.5 405 70.1
A09p44300 Brassica napus HOM05D004480 ORTHO05D005546 2.5e-141 506.1 404 66.8
Dinv41802 Davidia involucrata HOM05D004480 ORTHO05D005546 2.5e-141 506.1 335 77.3
A01p23550 Brassica napus HOM05D004480 ORTHO05D005546 3.2e-141 505.8 404 66.3
BcaC06g33042 Brassica carinata HOM05D004480 ORTHO05D005546 5.5e-141 505.0 404 67.3
CAN.G574.17 Capsicum annuum HOM05D004480 ORTHO05D005546 5.5e-141 505.0 401 68.1
TPR.G4936 Trifolium pratense HOM05D004480 ORTHO05D005546 9.4e-141 504.2 401 68.6
C08p26540 Brassica napus HOM05D004480 ORTHO05D005546 1.2e-140 503.8 404 67.1
Sp5g10950 Schrenkiella parvula HOM05D004480 ORTHO05D005546 1.2e-140 503.8 404 67.1
C07p46260 Brassica napus HOM05D004480 ORTHO05D005546 1.6e-140 503.4 404 66.8
PGSC0003DMG400021321 Solanum tuberosum HOM05D004480 ORTHO05D005546 1.6e-140 503.4 402 65.9
BcaNung06395 Brassica carinata HOM05D004480 ORTHO05D005546 2.7e-140 502.7 403 66.5
C01p29210 Brassica napus HOM05D004480 ORTHO05D005546 2.7e-140 502.7 403 66.5
BraA09t39892Z Brassica rapa HOM05D004480 ORTHO05D005546 3.6e-140 502.3 404 66.6
BraA01t02261Z Brassica rapa HOM05D004480 ORTHO05D005546 6.1e-140 501.5 406 66.0
VMungo1309G1911 Vigna mungo HOM05D004480 ORTHO05D005546 6.1e-140 501.5 395 70.4
BolC1t02850H Brassica oleracea HOM05D004480 ORTHO05D005546 8.0e-140 501.1 406 66.3
BolC8t50268H Brassica oleracea HOM05D004480 ORTHO05D005546 1.4e-139 500.4 404 66.1
SalBow6G1632 Salvia bowleyana HOM05D004480 ORTHO05D005546 2.6e-138 496.1 400 68.5
HanXRQChr14g0458331 Helianthus annuus HOM05D004480 ORTHO05D005546 4.4e-138 495.4 403 69.2
TAR623G1647 Trochodendron aralioides HOM05D004480 ORTHO05D005546 4.4e-138 495.4 438 64.2
HanXRQChr15g0465141 Helianthus annuus HOM05D004480 ORTHO05D005546 9.7e-138 494.2 407 67.8
AL5G31690 Arabidopsis lyrata HOM05D004480 ORTHO05D005546 6.3e-137 491.5 404 67.1
Sabra17G0005500 Salix brachista HOM05D000001 ORTHO05D005546 1.1e-136 490.7 475 58.1
FvH4_7g06440 Fragaria vesca HOM05D004480 ORTHO05D005546 1.4e-136 490.3 317 76.0
FAN10G1488 Fragaria x ananassa HOM05D004480 ORTHO05D005546 1.8e-136 490.0 394 66.2
Carub.0005s1764 Capsella rubella HOM05D004480 ORTHO05D005546 1.6e-135 486.9 408 66.2
Peaxi162Scf00586g00512 Petunia axillaris HOM05D004480 ORTHO05D005546 4.5e-135 485.3 400 65.8
BcaNung00392 Brassica carinata HOM05D004480 ORTHO05D005546 1.3e-134 483.8 396 66.4
THA.LOC104802357 Tarenaya hassleriana HOM05D004480 ORTHO05D005546 1.3e-134 483.8 398 68.8
BolC7t45142H Brassica oleracea HOM05D004480 ORTHO05D005546 1.7e-134 483.4 397 66.0
CARHR160850 Cardamine hirsuta HOM05D004480 ORTHO05D005546 1.7e-134 483.4 404 66.6
Nitab4.5_0002686g0020 Nicotiana tabacum HOM05D004480 ORTHO05D005546 1.5e-133 480.3 419 63.0
arahy.Tifrunner.gnm1.ann1.JT43NG Arachis hypogaea HOM05D004480 ORTHO05D005546 4.2e-133 478.8 396 65.4
Glyma.11G213400 Glycine max HOM05D004480 ORTHO05D005546 4.2e-133 478.8 277 84.8
Sed0005158 Sechium edule HOM05D004480 ORTHO05D005546 5.5e-133 478.4 318 75.8
ATR0743G007 Amborella trichopoda HOM05D004480 ORTHO05D005546 9.4e-133 477.6 416 63.0
unitig_62.g23773 Utricularia gibba HOM05D004480 ORTHO05D005546 8.8e-131 471.1 437 60.9
Thhalv10010355m.g Eutrema salsugineum HOM05D004480 ORTHO05D005546 1.2e-130 470.7 406 61.6
DCAR_011737 Daucus carota HOM05D004480 ORTHO05D005546 2.0e-130 469.9 454 59.3
Psat7g090480 Pisum sativum HOM05D004480 ORTHO05D005546 6.3e-129 464.9 338 71.0
Aa31LG1G7840 Aethionema arabicum HOM05D004480 ORTHO05D005546 2.0e-127 459.9 392 64.5
ECA248G1292 Erigeron canadensis HOM05D004480 ORTHO05D005546 1.1e-125 454.1 399 64.4
AT3G51270 Arabidopsis thaliana HOM05D004480 ORTHO05D005546 3.2e-125 452.6 404 62.9
Os01g0888700 Oryza sativa ssp. japonica HOM05D004480 ORTHO05D005546 9.4e-125 451.1 426 61.0
HanXRQChr15g0464981 Helianthus annuus HOM05D004480 ORTHO05D005546 2.1e-124 449.9 264 82.2
Zm00001eb145320 Zea mays HOM05D004480 ORTHO05D005546 8.0e-124 448.0 416 61.5
Cpa.g.sc9.237 Carica papaya HOM05D004480 ORTHO05D005546 1.8e-123 446.8 404 63.9
Zm00001eb365940 Zea mays HOM05D004480 ORTHO05D005546 4.0e-123 445.7 421 60.1
PSO732G0488 Papaver somniferum HOM05D004480 ORTHO05D005546 1.7e-121 440.3 399 62.9
PSO675G8718 Papaver somniferum HOM05D004480 ORTHO05D005546 2.2e-121 439.9 399 62.9
Haze_11102 Corylus avellana HOM05D004480 ORTHO05D005546 1.1e-120 437.6 395 61.8
BcaC09g50090 Brassica carinata HOM05D004480 ORTHO05D005546 1.4e-115 420.6 377 59.7
Mapoly0052s0036 Marchantia polymorpha HOM05D004480 ORTHO05D005546 6.8e-115 418.3 399 57.6
ClCG10G003270 Citrullus lanatus HOM05D004480 ORTHO05D005546 4.4e-114 415.6 498 52.6
AUR62001702 Chenopodium quinoa HOM05D004480 ORTHO05D005546 7.5e-114 414.8 397 58.4
Lsat_1_v5_gn_5_33821 Lactuca sativa HOM05D004480 ORTHO05D005546 3.7e-113 412.5 395 61.8
Aqoxy2G00126 Aquilegia oxysepala HOM05D004480 ORTHO05D005546 7.8e-111 404.8 433 54.3
Oeu061379.1 Olea europaea HOM05D004480 ORTHO05D005546 1.9e-109 400.2 218 87.6
Lju124A7T24 Lonicera japonica HOM05D004480 ORTHO05D005546 2.5e-109 399.8 211 90.0
SMO203G0211 Selaginella moellendorffii HOM05D004480 ORTHO05D005546 4.0e-107 392.5 264 72.3
SEGI_41177 Sequoiadendron giganteum HOM05D004480 ORTHO05D005546 6.8e-107 391.7 400 56.8
Pp3c20_22360 Physcomitrium patens HOM05D004480 ORTHO05D005546 7.5e-106 388.3 391 53.5
SHI53263 Sapria himalayana HOM05D004480 ORTHO05D005546 7.0e-104 381.7 267 72.3
AagrBONN_evm.TU.Sc2ySwM_228.3019 Anthoceros agrestis HOM05D004480 ORTHO05D005546 6.0e-103 378.6 262 71.0
CDE09G0674 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 1.7e-102 377.1 398 55.8
CDE02G2467 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 2.8e-100 369.8 404 52.7
CDE09G0719 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 4.0e-99 365.9 329 59.9
CDE09G1409 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 2.6e-98 363.2 396 54.0
ClCG00G001030 Citrullus lanatus HOM05D004480 ORTHO05D005546 4.6e-95 352.4 356 58.7
CBR_g22944 Chara braunii HOM05D004480 ORTHO05D005546 1.5e-93 347.4 208 76.4
CDE09G0134 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 1.2e-90 337.8 262 66.4
CDE02G0168 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 1.6e-87 327.4 281 60.1
AUR62020079 Chenopodium quinoa HOM05D004480 ORTHO05D005546 2.1e-84 317.0 406 49.8
Cre03.g159900 Chlamydomonas reinhardtii HOM05D004480 ORTHO05D005546 3.1e-75 286.6 261 56.3
PRCOL_00001861 Prasinoderma coloniale HOM05D004480 ORTHO05D005546 4.9e-73 279.3 260 53.8
MCO09G317 Micromonas commoda HOM05D004480 ORTHO05D005546 1.7e-70 270.8 269 53.5
Ciclev10020879m.g Citrus clementina HOM05D004480 ORTHO05D005546 1.2e-66 258.1 404 44.1
HPP92_020625 Vanilla planifolia HOM05D004480 ORTHO05D005546 3.9e-46 189.9 247 49.4
ClCG00G000020 Citrullus lanatus HOM05D004480 ORTHO05D005546 5.9e-42 176.0 187 57.8
Cfa009489 Carpinus fangiana HOM05D004480 ORTHO05D005546 1.1e-40 171.8 306 37.3
Migut.O00494 Erythranthe guttata HOM05D004480 ORTHO05D005546 1.4e-40 171.4 397 38.0
FAN07G0363 Fragaria x ananassa HOM05D004480 ORTHO05D005546 4.7e-31 139.8 197 46.2
Zm00001eb233680 Zea mays HOM05D009386 ORTHO05D011419 1.1e-29 135.2 149 52.3
SMO327G0006 Selaginella moellendorffii HOM05D004480 ORTHO05D005546 2.1e-23 114.4 75 77.3
Oeu061378.1 Olea europaea HOM05D004480 ORTHO05D005546 4.7e-23 113.2 192 45.3
Lju124A7T25 Lonicera japonica HOM05D004480 ORTHO05D005546 1.2e-21 108.6 204 42.6
Zm00001eb011520 Zea mays HOM05D009386 ORTHO05D011419 1.3e-20 105.1 106 57.5
Zm00001eb393850 Zea mays HOM05D009386 ORTHO05D011419 2.2e-20 104.4 108 56.5
Medtr8g090145 Medicago truncatula HOM05D004480 ORTHO05D005546 4.0e-14 83.6 183 37.7
Haze_07135 Corylus avellana HOM05D003858 ORTHO05D005878 3.8e-09 67.0 207 25.6
Sp4g03970 Schrenkiella parvula HOM05D003858 ORTHO05D005878 8.5e-09 65.9 202 27.2
SEGI_14248 Sequoiadendron giganteum HOM05D004480 ORTHO05D005546 1.1e-08 65.5 37 83.8
AL4G16080 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 1.5e-08 65.1 202 26.2
AT5G37350 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 1.5e-08 65.1 202 26.2
Carub.0004s0455 Capsella rubella HOM05D003858 ORTHO05D005878 1.5e-08 65.1 202 26.2
Cfa015653 Carpinus fangiana HOM05D003858 ORTHO05D005878 1.5e-08 65.1 207 26.6
AT2G24990 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 2.5e-08 64.3 227 26.4
CARHR116740 Cardamine hirsuta HOM05D003858 ORTHO05D005878 3.2e-08 63.9 304 25.3
AL7G45930 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 4.2e-08 63.5 195 26.7
PSO170G6136 Papaver somniferum HOM05D003858 ORTHO05D005878 7.2e-08 62.8 227 24.7
PSO478G4955 Papaver somniferum HOM05D003858 ORTHO05D005878 2.1e-07 61.2 227 26.9
PSO017G3328 Papaver somniferum HOM05D003858 ORTHO05D005878 4.7e-07 60.1 227 26.4
PSO423G0213 Papaver somniferum HOM05D003858 ORTHO05D005878 6.1e-07 59.7 228 25.9
Lj1g0027711 Lotus japonicus HOM05D003858 ORTHO05D005878 1.0e-06 58.9 225 26.2


User provided reference genes

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