Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 1.3e-168 596.3 298 100.0
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.8e-146 522.7 298 87.6
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 1.8e-146 522.7 298 87.6
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 7.0e-146 520.8 298 87.2
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 5.6e-143 511.1 298 86.2
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 3.9e-120 435.3 298 73.5
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 3.9e-120 435.3 298 74.8
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.2e-118 430.3 299 73.6
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 6.8e-117 424.5 300 73.0
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 4.4e-116 421.8 260 78.8
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 5.8e-116 421.4 301 73.8
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 7.8e-113 411.0 269 76.6
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 7.8e-113 411.0 263 77.6
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 3.3e-111 405.6 263 77.2
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 4.3e-111 405.2 303 70.6
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.3e-110 403.7 286 69.9
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 6.2e-110 401.4 258 76.0
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 4.0e-109 398.7 263 75.7
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 6.9e-109 397.9 263 75.7
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 9.0e-109 397.5 291 71.1
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 2.6e-108 396.0 278 72.3
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 3.4e-108 395.6 292 69.2
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 2.2e-107 392.9 268 72.0
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 2.9e-107 392.5 272 71.3
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 8.4e-107 391.0 298 67.8
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 1.1e-106 390.6 254 74.8
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 1.4e-106 390.2 237 79.7
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 2.4e-106 389.4 257 75.5
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 3.2e-106 389.0 291 68.4
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 1.6e-105 386.7 271 74.5
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 1.6e-105 386.7 281 68.7
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 1.6e-105 386.7 245 77.1
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 2.1e-105 386.3 297 68.0
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 1.3e-104 383.6 256 73.4
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 1.7e-104 383.3 263 72.2
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 3.0e-104 382.5 306 66.0
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 1.5e-103 380.2 298 65.1
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 2.5e-103 379.4 252 73.8
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.3e-103 379.0 298 65.8
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 2.1e-102 376.3 252 74.2
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 2.1e-102 376.3 298 65.1
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 2.8e-102 375.9 304 65.1
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 8.1e-102 374.4 256 73.8
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 1.8e-101 373.2 275 68.4
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 1.8e-101 373.2 295 66.1
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 1.8e-101 373.2 311 62.7
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 6.9e-101 371.3 302 65.2
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 6.9e-101 371.3 302 65.2
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 1.2e-100 370.5 237 76.4
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 5.8e-100 368.2 248 74.2
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 5.8e-100 368.2 248 74.2
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 5.8e-100 368.2 248 74.2
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 5.8e-100 368.2 218 82.1
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.3e-99 367.1 260 69.2
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 1.3e-99 367.1 246 72.0
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 1.7e-99 366.7 281 66.2
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 2.2e-99 366.3 308 62.3
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 2.2e-99 366.3 300 63.3
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 2.9e-99 365.9 312 61.9
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 3.8e-99 365.5 309 62.8
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 4.9e-99 365.2 250 70.8
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 8.4e-99 364.4 278 66.9
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 3.2e-98 362.5 260 70.0
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 9.3e-98 360.9 311 61.4
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 1.6e-97 360.1 287 66.2
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 2.1e-97 359.8 253 71.9
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 4.6e-97 358.6 245 73.9
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 4.6e-97 358.6 272 66.9
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 6.0e-97 358.2 260 69.2
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 7.9e-97 357.8 281 65.1
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 7.9e-97 357.8 252 70.6
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 1.5e-95 353.6 312 60.3
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 1.5e-95 353.6 252 69.8
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 2.5e-95 352.8 252 69.8
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 3.3e-95 352.4 252 69.4
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 9.6e-95 350.9 239 70.3
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.4e-93 347.1 277 62.5
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 4.0e-93 345.5 260 67.7
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 6.9e-93 344.7 243 71.6
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 6.5e-91 338.2 261 66.7
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 3.2e-90 335.9 364 53.6
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 4.2e-90 335.5 272 63.6
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 5.5e-90 335.1 231 71.4
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 5.5e-90 335.1 300 58.0
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 9.3e-90 334.3 261 65.9
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 4.8e-86 322.0 252 63.9
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 8.2e-86 321.2 267 62.9
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 5.3e-85 318.5 268 64.2
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 2.2e-83 313.2 277 61.7
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 1.1e-82 310.8 226 69.9
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 4.2e-82 308.9 307 57.0
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 4.6e-81 305.4 271 61.3
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 7.9e-81 304.7 257 65.8
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.2e-75 286.6 266 60.2
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 6.5e-75 285.0 177 76.3
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 6.5e-75 285.0 266 59.8
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 2.5e-74 283.1 158 89.9
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 1.5e-71 273.9 203 68.5
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 9.7e-71 271.2 310 49.7
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 6.3e-70 268.5 204 63.7
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 2.0e-68 263.5 262 57.3
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.4e-66 257.3 256 55.1
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 5.5e-66 255.4 248 52.4
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 1.6e-57 227.3 173 68.8
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.1e-45 188.0 101 86.1
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 1.1e-42 177.9 130 67.7
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 9.2e-37 158.3 252 40.1
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 4.5e-36 156.0 107 71.0
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 5.6e-26 122.5 202 36.1
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 7.8e-12 75.5 50 78.0
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 3.9e-11 73.2 101 42.6


User provided reference genes

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