Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 3.0e-276 954.5 471 100.0
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.3e-247 859.4 459 92.2
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 3.6e-245 851.3 454 90.7
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.2e-243 846.3 464 88.6
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 3.2e-238 828.2 456 88.6
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 6.1e-237 823.9 461 86.8
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 6.8e-236 820.5 454 86.6
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 9.8e-235 816.6 453 85.7
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 1.3e-234 816.2 454 85.9
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 1.7e-234 815.8 456 85.3
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 1.1e-233 813.1 445 86.3
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 3.1e-233 811.6 435 88.5
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 4.1e-233 811.2 444 86.7
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 1.6e-232 809.3 427 89.5
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.6e-232 809.3 432 88.9
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 2.0e-232 808.9 456 85.3
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 2.7e-232 808.5 465 83.2
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 1.3e-231 806.2 450 85.1
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.3e-231 806.2 443 86.7
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 2.3e-231 805.4 460 84.6
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 2.9e-231 805.1 453 85.2
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 2.9e-231 805.1 460 84.3
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 2.9e-231 805.1 454 86.3
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 9.5e-230 800.0 454 84.6
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 1.2e-229 799.7 451 84.7
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 1.2e-229 799.7 427 88.8
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 2.1e-229 798.9 445 84.3
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 2.8e-229 798.5 458 83.6
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 2.8e-229 798.5 431 87.9
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 3.6e-229 798.1 455 84.2
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 6.1e-229 797.3 442 83.9
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 6.1e-229 797.3 449 84.4
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 3.0e-228 795.0 484 82.2
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 4.0e-228 794.7 425 88.0
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 6.8e-228 793.9 454 82.6
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 8.9e-228 793.5 456 84.0
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 8.9e-228 793.5 436 85.6
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 3.4e-227 791.6 452 83.4
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.4e-227 791.6 431 86.8
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 3.4e-227 791.6 458 82.8
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 3.4e-227 791.6 434 85.5
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 5.7e-227 790.8 432 86.6
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 7.5e-227 790.4 452 84.5
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 1.7e-226 789.3 445 84.0
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 2.2e-226 788.9 447 83.4
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 2.9e-226 788.5 450 82.7
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 2.9e-226 788.5 454 82.8
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 2.9e-226 788.5 437 85.1
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 3.7e-226 788.1 445 84.0
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 8.3e-226 786.9 456 83.6
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 1.1e-225 786.6 460 81.1
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 5.4e-225 784.3 428 85.0
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 2.7e-224 781.9 452 82.1
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.3e-223 779.6 425 86.8
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 2.3e-223 778.9 460 80.2
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 8.6e-223 776.9 459 80.2
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 1.1e-222 776.5 472 79.0
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 1.1e-222 776.5 444 82.4
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.9e-222 775.8 460 80.0
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 4.3e-222 774.6 459 79.7
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 7.3e-222 773.9 459 80.0
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 3.6e-221 771.5 428 83.6
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 1.1e-220 770.0 415 86.7
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 1.1e-220 770.0 472 78.4
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 2.3e-220 768.8 460 79.1
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 4.0e-220 768.1 428 83.2
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 4.0e-220 768.1 461 79.0
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 4.0e-220 768.1 468 78.6
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 5.2e-220 767.7 428 82.9
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 2.6e-219 765.4 456 79.4
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 2.6e-219 765.4 428 82.9
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 4.4e-219 764.6 450 81.1
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 7.0e-217 757.3 431 83.5
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 2.7e-216 755.4 444 80.2
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 1.0e-215 753.4 422 82.2
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 5.0e-215 751.1 432 81.9
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 4.9e-210 734.6 443 79.9
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 6.4e-210 734.2 401 86.5
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 3.2e-209 731.9 433 80.1
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 5.4e-209 731.1 496 73.8
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 3.5e-208 728.4 460 76.1
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 6.0e-208 727.6 401 84.5
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 6.2e-205 717.6 473 75.3
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 5.8e-203 711.1 451 77.8
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 2.9e-202 708.8 423 77.5
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 1.1e-201 706.8 430 76.3
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.0e-199 700.3 433 77.6
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 1.2e-197 693.3 466 70.8
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 2.8e-197 692.2 382 85.3
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 4.7e-197 691.4 468 73.7
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 6.2e-197 691.0 393 84.2
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 3.4e-195 685.3 574 64.1
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 5.4e-193 677.9 390 82.8
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 6.2e-189 664.5 457 72.4
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 9.0e-188 660.6 387 80.9
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 7.1e-185 651.0 357 86.0
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 1.6e-181 639.8 420 70.5
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.1e-177 627.1 429 72.5
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 4.5e-171 605.1 428 66.4
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 4.9e-170 601.7 377 78.2
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 2.8e-165 585.9 424 65.3
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 2.9e-162 575.9 493 62.7
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 7.4e-142 508.1 271 88.2
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 9.7e-142 507.7 296 82.1
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 3.7e-141 505.8 298 81.2
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 4.7e-136 488.8 447 56.4
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 8.8e-135 484.6 376 62.0
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 1.7e-117 427.2 252 83.3
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 3.3e-65 253.4 147 78.9
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 9.6e-65 251.9 190 67.4
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.9e-60 237.7 143 77.6
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 7.4e-41 172.6 97 78.4
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 1.8e-26 124.8 70 85.7
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 2.6e-25 120.9 79 68.4
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 1.9e-20 104.8 57 84.2
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 7.5e-17 92.8 49 87.8
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 6.1e-11 73.2 46 73.9
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 8.0e-11 72.8 49 69.4
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.3e-10 71.2 42 76.2
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 4.1e-07 60.5 40 75.0


User provided reference genes

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