Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G1196 Durio zibethinus HOM05D001197 ORTHO05D000124 1.6e-64 249.2 122 100.0
Gohir.A02G029000 Gossypium hirsutum HOM05D001197 ORTHO05D000124 1.5e-30 136.3 119 65.5
Gohir.D02G036800 Gossypium hirsutum HOM05D001197 ORTHO05D000124 2.6e-30 135.6 118 63.6
Gorai.005G040700 Gossypium raimondii HOM05D001197 ORTHO05D000124 2.6e-30 135.6 118 63.6
Ciclev10006073m.g Citrus clementina HOM05D001197 ORTHO05D000124 8.1e-16 87.4 125 47.2
Atru.chr4.2577 Acer truncatum HOM05D001197 ORTHO05D000124 8.4e-13 77.4 129 45.0
TWI73G1277 Tripterygium wilfordii HOM05D001197 ORTHO05D000124 4.2e-12 75.1 128 43.0
Manes.15G022650 Manihot esculenta HOM05D001197 ORTHO05D000124 9.3e-12 73.9 120 41.7
QL06p005338 Quercus lobata HOM05D001197 ORTHO05D000124 1.2e-11 73.6 118 42.4
Actinidia23472 Actinidia chinensis HOM05D001197 ORTHO05D000124 2.1e-11 72.8 125 41.6
Phvul.003G093200 Phaseolus vulgaris HOM05D000604 ORTHO05D000124 1.3e-10 70.1 85 48.2
Nn4g26186 Nelumbo nucifera HOM05D000644 ORTHO05D000504 1.8e-10 69.7 65 50.8
ATR0626G402 Amborella trichopoda HOM05D001197 ORTHO05D000124 2.3e-10 69.3 76 50.0
Nitab4.5_0025924g0010 Nicotiana tabacum HOM05D001197 ORTHO05D000124 2.3e-10 69.3 108 38.0
Cpa.g.sc16.28 Carica papaya HOM05D001197 ORTHO05D000124 3.9e-10 68.6 117 38.5
Lj4g0014495 Lotus japonicus HOM05D001197 ORTHO05D000124 6.7e-10 67.8 78 47.4
CSS0004629 Camellia sinensis var. sinensis HOM05D001197 ORTHO05D000124 8.7e-10 67.4 133 39.1
Nitab4.5_0002594g0010 Nicotiana tabacum HOM05D001197 ORTHO05D000124 8.7e-10 67.4 111 37.8
Thhalv10014796m.g Eutrema salsugineum HOM05D001197 ORTHO05D000124 1.1e-09 67.0 60 50.0
TPR.G20133 Trifolium pratense HOM05D001197 ORTHO05D000124 1.1e-09 67.0 102 45.1
Hma1.2p1_1037F.1_g250650 Hydrangea macrophylla HOM05D000142 ORTHO05D000124 1.5e-09 66.6 96 42.7
Sp6g25350 Schrenkiella parvula HOM05D001197 ORTHO05D000124 2.5e-09 65.9 62 50.0
CiPaw.02G092000 Carya illinoinensis HOM05D001197 ORTHO05D000124 3.3e-09 65.5 127 40.9
PGR004G0965 Punica granatum HOM05D001197 ORTHO05D000124 3.3e-09 65.5 128 37.5
VMungo1215G1433 Vigna mungo HOM05D002097 ORTHO05D000124 3.3e-09 65.5 116 41.4
GSVIVG01017884001 Vitis vinifera HOM05D001197 ORTHO05D000124 7.4e-09 64.3 119 40.3
MSTRG.10019 Avicennia marina HOM05D001197 ORTHO05D000124 1.3e-08 63.5 101 42.6
A03p09260 Brassica napus HOM05D000137 ORTHO05D000503 1.3e-08 63.5 61 47.5
BraA03t10246Z Brassica rapa HOM05D001197 ORTHO05D000124 1.3e-08 63.5 61 47.5
Medtr4g117350 Medicago truncatula HOM05D001197 ORTHO05D000124 1.3e-08 63.5 94 41.5
AT5G19030 Arabidopsis thaliana HOM05D001197 ORTHO05D000124 1.6e-08 63.2 95 35.8
MBI17_g12017_MAGBIO Magnolia biondii HOM05D001197 ORTHO05D000124 2.1e-08 62.8 69 46.4
HPP92_011832 Vanilla planifolia HOM05D001197 ORTHO05D000124 2.1e-08 62.8 59 47.5
Ca_21589_v3 Cicer arietinum L. HOM05D001197 ORTHO05D000124 2.8e-08 62.4 98 41.8
Glyma.17G017500 Glycine max HOM05D000604 ORTHO05D000124 2.8e-08 62.4 113 35.4
Peaxi162Scf00769g00028 Petunia axillaris HOM05D001197 ORTHO05D000124 2.8e-08 62.4 63 41.3
BcaB01g04879 Brassica carinata HOM05D001197 ORTHO05D000124 8.1e-08 60.8 59 45.8
Sopen06g019450 Solanum pennellii HOM05D001197 ORTHO05D000124 1.1e-07 60.5 70 38.6
Carub.0006s1735 Capsella rubella HOM05D001197 ORTHO05D000124 1.4e-07 60.1 106 33.0
Glyma.07G256600 Glycine max HOM05D000142 ORTHO05D000124 1.4e-07 60.1 114 37.7
THA.LOC104802742 Tarenaya hassleriana HOM05D001197 ORTHO05D000124 1.4e-07 60.1 59 45.8
BcaB01g05288 Brassica carinata HOM05D001197 ORTHO05D000124 1.8e-07 59.7 59 44.1
AL6G30390 Arabidopsis lyrata HOM05D001197 ORTHO05D000124 2.4e-07 59.3 93 36.6
CARHR193960 Cardamine hirsuta HOM05D000428 ORTHO05D000124 2.4e-07 59.3 61 42.6
Migut.G00263 Erythranthe guttata HOM05D001197 ORTHO05D000124 3.1e-07 58.9 69 40.6
C03p10790 Brassica napus HOM05D000137 ORTHO05D000503 4.0e-07 58.5 59 42.4
BolC3t13553H Brassica oleracea HOM05D001197 ORTHO05D000124 4.0e-07 58.5 59 42.4
SalBow2G1129 Salvia bowleyana HOM05D001197 ORTHO05D000124 5.3e-07 58.2 84 42.9
Psat4g032200 Pisum sativum HOM05D001197 ORTHO05D000124 3.4e-06 55.5 60 46.7
Sc19g0004590 Simmondsia chinensis HOM05D001197 ORTHO05D000124 3.4e-06 55.5 106 34.9
Aa31LG11G10690 Aethionema arabicum HOM05D001197 ORTHO05D000124 5.8e-06 54.7 63 39.7
Solyc06g054380.4 Solanum lycopersicum HOM05D001197 ORTHO05D000124 7.6e-06 54.3 110 31.8
Dinv38389 Davidia involucrata HOM05D001197 ORTHO05D000124 1.0e-05 53.9 60 45.0


User provided reference genes

Program Settings